TCONS_00046841 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046841
Unique NameTCONS_00046841
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046841 ID=TCONS_00046841|Name=TCONS_00046841|organism=Clytia hemisphaerica|type=transcript|length=206bp
GTTTTTCTGTTTATCTTTTTGAACCGTCTCATGggggattttttattttc
gttcataaacattgtttttattttcttgttgttttggGATATAGAAGGAT
ATAAtttaatttgaaagattttatttgTGACCCGACTTTATTCTGATTCA
CACATATATCTTGTTGTGCTGACTGCTTTTTGTGTTACGACATGTTAATA
TAATTT
Run BLAST on NCBI

transcript from alignment at scaffold_117:197226..197431

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046841 ID=TCONS_00046841|Name=TCONS_00046841|organism=Clytia hemisphaerica|type=transcript|length=206bp|location=Sequence derived from alignment at scaffold_117:197226..197431 (Clytia hemisphaerica)
AAATTATATTAACATGTCGTAACACAAAAAGCAGTCAGCACAACAAGATA
TATGTGTGAATCAGAATAAAGTCGGGTCAcaaataaaatctttcaaatta
aaTTATATCCTTCTATATCccaaaacaacaagaaaataaaaacaatgttt
atgaacgaaaataaaaaatccccCATGAGACGGTTCAAAAAGATAAACAG
AAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029885XLOC_029885Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046841-exon-scaffold_117-1491911889:197226..197431TCONS_00046841-exon-scaffold_117-1491911889:197226..197431Clytia hemisphaericaexon
TCONS_00046841-exon-scaffold_117-1510915933:197226..197431TCONS_00046841-exon-scaffold_117-1510915933:197226..197431Clytia hemisphaericaexon
TCONS_00046841-exon-scaffold_117-1575043694:197226..197431TCONS_00046841-exon-scaffold_117-1575043694:197226..197431Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:197226..197431 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046841 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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