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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046738 ID=TCONS_00046738|Name=TCONS_00046738|organism=Clytia hemisphaerica|type=transcript|length=1007bp
cttcgaaaaattttgacgttcttataaaaaaaaaaacgcgtaGTCTAAGT
TTCATAAATCAATTATCAATTTAAGCTCCTAATTTTGTCATTTAGTCact
attttcatttattttatcaaTTCAAATACTTATTATTccttaatttattt
tcattcagtttgaACGCAAAGATATCAATCCTTCAATCAATATCTTGTTA
CAAACCCTCTCAAGTGTGTTGCACTATTCCacatattctgagccctattg
gaccattcttgaacttttggatccttagatcctaagctcctatgttttaa
gtctagcgttaaaactcagagttaaaactctacccttccaacctattcta
gagcgcttccaaatcgtttgtggttataagatttcgtaggaatttccctt
ctttgtcaaatattacgaccatgattgtagttttgattttaaaagaggGA
TGAAATAGTTATTTCTTTAATGGTGATTAAATTTTAGGATATTTTTcgca
ccggggacgaaattttggtcaaattttccagtggggtggGCCTAcaaggt
ctgtgacacaggaaTGTATACTAAGGCCAAGGAATTTGGCTAAGGAGTCT
TCAAAAACTATGATCCAGAGTGCTGTTTTGATGCGAAAAATGAGTAACAG
ATATTTGCTAGCAGTGAAAATCTCATAAAAGGTTACTAAGGGGTAAAAAA
TACTCTAAAACACTTTGaggaaaaaaacagaaaagGATGAATTTAACTTC
TGAGGGTAAAATTTTGTATGATAGAAAGAGAGGAAGGGATGCCAAATTGT
AAAACCTGGAGATGTCAGAATAGTATAAGCAAATTATTTAAAGCAAATCT
TCCATAATACTTTGAACAGGTTCTGCTTTGAGCGACAGAAATGTTTAGTG
TGTCTGACAAAGATTATTTCTTCCGATGCATTTTAATTGTAGCAAAGTGG
AAAGGGGTATAAATAAGTCTTTATCAATTTTGTTCAGTTTACATACCTTA
TTACATG Run BLAST on NCBI transcript from alignment at scaffold_116:377604..378610 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046738 ID=TCONS_00046738|Name=TCONS_00046738|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at scaffold_116:377604..378610 (Clytia hemisphaerica)
CATGTAATAAGGTATGTAAACTGAACAAAATTGATAAAGACTTATTTATA
CCCCTTTCCACTTTGCTACAATTAAAATGCATCGGAAGAAATAATCTTTG
TCAGACACACTAAACATTTCTGTCGCTCAAAGCAGAACCTGTTCAAAGTA
TTATGGAAGATTTGCTTTAAATAATTTGCTTATACTATTCTGACATCTCC
AGGTTTTACAATTTGGCATCCCTTCCTCTCTTTCTATCATACAAAATTTT
ACCCTCAGAAGTTAAATTCATCcttttctgtttttttcctCAAAGTGTTT
TAGAGTATTTTTTACCCCTTAGTAACCTTTTATGAGATTTTCACTGCTAG
CAAATATCTGTTACTCATTTTTCGCATCAAAACAGCACTCTGGATCATAG
TTTTTGAAGACTCCTTAGCCAAATTCCTTGGCCTTAGTATACAttcctgt
gtcacagaccttgTAGGCccaccccactggaaaatttgaccaaaatttcg
tccccggtgcgAAAAATATCCTAAAATTTAATCACCATTAAAGAAATAAC
TATTTCATCcctcttttaaaatcaaaactacaatcatggtcgtaatattt
gacaaagaagggaaattcctacgaaatcttataaccacaaacgatttgga
agcgctctagaataggttggaagggtagagttttaactctgagttttaac
gctagacttaaaacataggagcttaggatctaaggatccaaaagttcaag
aatggtccaatagggctcagaatatgtGGAATAGTGCAACACACTTGAGA
GGGTTTGTAACAAGATATTGATTGAAGGATTGATATCTTTGCGTtcaaac
tgaatgaaaataaattaaggAATAATAAGTATTTGAAttgataaaataaa
tgaaaatagtGACTAAATGACAAAATTAGGAGCTTAAATTGATAATTGAT
TTATGAAACTTAGACtacgcgtttttttttttataagaacgtcaaaattt
ttcgaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046738-exon-scaffold_116-1491911889:377604..378610 | TCONS_00046738-exon-scaffold_116-1491911889:377604..378610 | Clytia hemisphaerica | exon |
| TCONS_00046738-exon-scaffold_116-1510915933:377604..378610 | TCONS_00046738-exon-scaffold_116-1510915933:377604..378610 | Clytia hemisphaerica | exon |
| TCONS_00046738-exon-scaffold_116-1575043694:377604..378610 | TCONS_00046738-exon-scaffold_116-1575043694:377604..378610 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:377604..378610 . |
Blast
The following BLAST results are available for this feature:
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