TCONS_00046666 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046666
Unique NameTCONS_00046666
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1417

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046666 ID=TCONS_00046666|Name=TCONS_00046666|organism=Clytia hemisphaerica|type=transcript|length=1417bp
GAAAAATTAAGTGAGATGAAGTGTAAGAATATAACTTAATAACGAAAAGA
TACATACTCTTGCAATTTCAATATTAACACTGTTGACACTGCATGTTAGA
CCCCTCGTGGTTGAGCAAAGAAATaccttaaaatcaaaatcatcaagGCA
GTCAACACGGATTCCTGTCTACCACATGGAGCTCCACCACACAGTCTATT
TTTTCACCATATTTGATGCCTTTTTTGCCGCGACCGAGAAAAATGCATAA
AGCAGCCGTGCCGGATCTAACAAgcacaaaaagttaaaaaaagaggCTGG
GTCGGCTATGAGGATTTAATTCTTTCCTTAGAATTGACACAAATCGAAAT
AGAAAGTGTTTTGAGTCACGTCCAGTTCGGAGTTCCAGTTCATCCAAATC
CAGTTTCAAAAAAAGGATGAAGTTTTTGGCAAGTCTTCTTGCTTTATGTT
CCTGTACAAAGATTCAGGCCAATGAAGATGATCAAAATGGACTGGATAAT
GATCAACCAGATGGACCTCAAAGTCAACCAATTATAAGAGACAATGTGAC
CAGTGCCAAAAGTGCTAACATTAATAGTGCAACCATTGCCACGTTTTCAA
TAAATAGATTTAAccaaaagaaatatgaaaacaaCGAAGTAAAAGAATAT
TTGTTAAAGattttGAGTCGATATGACTTTATTTTCATACAAGAAGTACA
GGACGAGAGTGAAGAGtttattcatttgtttattGAAGAACTTAAAGGGA
TGACAGGGAAATCTTACAAATATAAGCTTGGTAAGGCATCAGGaagaaaa
agcaagaaaaatcaACTTATGTTCCTCTATAGAGAttctttgtttacatt
gattgatcATTATCAATACCAGGATAATGATGATAAATTCGAAAGACAGC
CATTTATTGCTAAATTCAGATCAAATAAACTCGAAGTTGAAGAGTTTGCA
GTGATTGGAGTTTGTTTGCATTATGATTCAGTAGAGGCTGAAATCAACCA
TCTAGCCTCTGTCcatgaagaaatgaaaaatttttggggTGATATACCAA
CCTTGATCATGGGTAATTTCATGACAGGTGGAAGCCACATATCAAAGACA
AAATTGAGAGAAACAGCTTTGCAGAAAGACTCAAATTATGTGTGGTTTGT
TGACAATATTGACACAACCGtccttaaaaacaaatattgtTATGACAGGA
TAATTGGTTATGGGAATATTATGGAGAATATTCAATTGGATTCAGTAAAA
GCATTTCGATTCGATGATGAATTTGGTCTATCTATGGACGAGGCAAAAGC
CATAACTGACCACTATCCAGTAGAAGTCGTCATAGgtCCAAAAGTTTTTT
CGAATGATGTCGAGGAAAAGCCAGCTAACAGTTACGCCATTGACAACAAC
GATCTTAACGACATCGA
Run BLAST on NCBI

transcript from alignment at scaffold_116:647135..656173+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046666 ID=TCONS_00046666|Name=TCONS_00046666|organism=Clytia hemisphaerica|type=transcript|length=9039bp|location=Sequence derived from alignment at scaffold_116:647135..656173+ (Clytia hemisphaerica)
GAAAAATTAAGTGAGATGAAGTGTAAGAATATAACTTAATAACGAAAAGA TACATACTCTTGCAATTTCAATATTAACACTGTTGACACTGCATGTTAGA CCCCTCGTGGTTGAGCAAAGAAATaccttaaaatcaaaatcatcaagGCA GTCAACACGGATTCCTGTCTACCACATGGAGCTCCACCACACAGTCTATT TTTTCACCATATTTGATGCCTTTTTTGCCGCGACCGAGAAAAATGCATAA AGCAGCCGTGCCGGATCTAACAAgcacaaaaagttaaaaaaagaggCTGG GTCGGCTATGAGGATTTAATTCTTTCCTTAGAATTGACACAAATCGAAAT AGAAAGTGTTTTGAGTCACGTCCAGTTCGGAGTTCCAGTTCATCCAAATC CAGTTTCAAAAAAAGGATGAAGTTTTTGGCAAGTCTTCTTGCTTTATGTT CCTGTACAAAGATTCAGGCCAATGAAGATGATCAAAATGGGTAAGAATTT TATAGTGTCGACAATGCTGTATATATTTAACAAGGCAcatcctaaaaata tttttttaaataaatcagCGACTGCTCCCTCCTACTCCCTCATCCTACCT ACTTTGTTTCAATCTTTTGTGTCTGCCAGTGCCAGTGTGTCTGTAGATTT GCTACGGTAATTTtggactttcttgaaagcaatttgctacaGAAATTCTA TGCCGTTTGTTGCGTTGAGGGAGGGGTAACAGATAAAAACTGGAATGACG CccccaatagaccttttttcaaagaggccacNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNCAATAtgtatgatacagtaattatgcatggctctatcatt gtttttatggctggactacataattattcaacaggacgtcctctttgaaa aaaggtctatggacAGATGGATTCAGGCAAATTTTCAGGGTTTTGAGCTG CTatcgtttttatttcaaagattgaGTTTGATTCAGTTTAAAGAACAACA TAACCTGTTTAATTAGTTGGGAActatcaaaacacaaaaaatttaCCTCA GAATGGACTTTTTCTGTTAAGGCCTAGGACATAGGACATCAATATTTTGT CATGATTCTCATGGCTCATGTACAAAAATTAGGAtttagtttcaaaattc aagcaaAGATTGAGTTTCTGCCACCGTTAACTGGTAGCAGAAAAGGCCTG GAAATTTGCCTGAGATTGGATTGATTGTGATTTCGATAATCAAGCTTCAT AGACAATCAATAACCAGGACTTTAATTGAGGCTTGATTGCTTatcaattg attgattgatcatGGCATGGATAGTGGGAGAAAGCGacagtctattgaat aacaagtTACTCCAGTATACAGTTACCATGAGAtaaggtaacttgcatca gtgaaggGGGACTTGCGTAGCCATCAAATGCCTGACCAATCAAagtagca aaatttcaaaacaaaagtaacAGTACAAGgacagctccgcttgcagctct actctacgaTTTTTGAATCCCATATTTACCACCTGAGTATTTTTGTTGAG TTACTTGCTTACAGAATCGCATGTAAATAAGACAACGTGGTTTGATGATA AAAAATCAAGCCAGATCAGAAATTTTAAGGAAGTCAGATGTTTCTCTATG GCTGCTGGAGGGGTAATCTCAAATTCAATAATGATATTAAATAATTATAC ATGTGACATCACTTTTATGATTAGGAGATTTATACATTTTTACAACCTGC TAATTTTGTtaatcaggtttgttttgatttaactttgtattctAATAAca agccaggtcattcattctagagctatgcatgttagcctccaatgatgcaa gttaccatCTCACTGTAGGAGTTCTTGGTTGCAGTgttgcaatcaaaaaa atcataacagcGCTCATAAAGCACATAACATATTCTTATGATATAATTAT TAATATTCACTgtaaaacaaatttgttatgCACTGCAGTGGAGTGGATGA GGTAGCTCACACGAAAACTAACTTACCTTCCTTGAAGCAGCATACACCTT TGTCCATCATGGCCTTAACAATTGATCCAAAAGGGTACCCTCATCATGGA AGAtcatttgttttggtctccagctttggAAAGTAGAAATGGTTTTGGTt gttttgatggaaaatggtaCAAGAAACTTGAGTTTAGTTTTTGCTTACTG ATAGAATGACAGGATCCTGTATGTCTTCCTTAACTGATATTACTTTCCCT CAGTCAGTGCAAACAGGATAAGTTATCTTGTCCCTAGGTAACCAATGTGT TGTCAAAGACAGATCAATTATATGAAGTAATCATTAAAAATATCCTGGAG tgattagttattcaaaagaccctGTGCTGCATCTTCCCAAACAACTACTG GCTCTAAAATGATTGCTTGATCACAATCAATAGCCATaattatggaaaaa aataatttcggtAGATTTAggattcaatttttttccataattttCAAATC TTCCTCTTAATTTAAGACTGGATAATGATCAACCAGATGGACCTCAAAGT CAACCAATTATAAGAGACAATGTGACCAGTGCCAAAAGTGCTAACATTAA TAGTGCAACCATTGCCACGTTTTCAATAAATAGATTTAAccaaaagaaat atgaaaacaaCGAAGTAAAAGAATATTTGTTAAAGGTATGTTTATAACTA TTTTTTGGGAATACATCAAATGGTATTTTTGTTGTTGATCCTATATATGT CCAGTATTTTTACacacatttttcaaataaagttAAATATACTACACATT CAAGAGGGGGTGTAGATTATCATTTTAGTCAATTCTTATAGCGCCAAATT GCAAATGCTAGACAAAAAGATCTCAATAAATTAGATTTAAGGTGGGCTAT CTTCAAATTTAGAATTTGTTTAGAAACTAGGGTGTGCGTTAGAATTCAAA AGATGTATTGATAAATTgtattgtcatttttttttttttttcatagattt tGAGTCGATATGACTTTATTTTCATACAAGAAGTACAGGACGAGAGTGAA GAGtttattcatttgtttattGAAGAACTTAAAGGGTATGGTATTCTAGT ACCtagattcatgatatgcaccactgtagagtcttctgagaattttccac cctaatacgtcactttttctactttttaagtgacgtattgggtggaagat tttaaaaattctcagaagactctccactggtgcatatcatgaatagccaG GTAATGAGATTGGATTTGAAGGACTGAAAATTTATTAGATACAATCTATA TGGTCATCTTGGTCATCCGTAATAAGCGACATAATGATAATCTGTCTGTG TTATTTCAATTCAGAATTCATTTTAAAATCGCAGAGATAAGACACAAGTT TATCATTATTATCATTCTTGGAATTAAATTTGAAGGCcgtgtttttctgt ttttctagGATGACAGGGAAATCTTACAAATATAAGCTTGGTAAGGCATC AGGaagaaaaagcaagaaaaatcaACTTATGTTCCTCTATAGGTACAgta taaaatttttttcagtgaaaTATTATTTGGTAAAGGGTATATACATGTTG TGGGTTTCTTTAAACTTTCTTagtgattttttcatttcatggcATCTAAA AATTCTCTTATTTAGCTCTATTTtcatcaatagagatttcatgTGAATCA AGCTTTCACGATAAGGGTTGTAGGGTGGTTTCTATTCATCCGTTCTGGAA TGATTGATTCAGCAGTGAGTTTAGAATCTTATTTACAAATTGAATATTCT TCCTTCTTATATTGTAGAGAttctttgtttacattgattgatcATTATCA ATACCAGGATAATGATGATAAATTCGAAAGACAGCCATTTATTGCTAAAT TCAGATCAAATAAACTCGAAGGTAAGATATACTCAAAATTTTGCATtgta aaaagaaaggaaaataatattttggttttatgacTGTTGTATCTTATTTT TAATCGCAAAAATTGTGATCAAAGTCTTTGGCTTGAAGTGATTTGTATAC ATTTGGtatcaaagaattaaaaattgaaaatgaagtaCAAATCATATCAA AATAAACCAAACCTGTTAAGGTTATGAATCATcattatttactatttttc taTTTGTACAAATGAATTTTAGCTCAAATATGACCGTTGCTGTTCTCTCC CCCATGATTTTCAGGCCTGTTTTTTAGATCTCTCTAAAAAGCTTACAATA ATTGAACTTATTTGTTTAATGAGGGCTTCAGTACAAGCATGTTCCTAGGG GTTCTTGCTGAAGTTGAGGCTTATTCTAAATTTATTCTTGGTTTTCAGCT AAAATTTCAGTCTCGTAAccttataaaattattattctcataaaatctga aaattaatccacttcaAGGTTGTTTGTCTCGTGTCATTGTTGATTTAACT TTTTCTTCCTTTGCAGTTGAAGAGTTTGCAGTGATTGGAGTTTGTTTGCA TTATGATTCAGTAGAGGCTGAAATCAACCATCTAGCCTCTGTCcatgaag aaatgaaaaatttttggggTGATATACCAACCTTGATCATGGGTAATTTC ATGACAGGTGGAAGGTAGGAAAACTGACTGTTATCCATTGTGAAAGGTTA TTCCGTCTCAATGGATTTCTATCTCAGCAAAGTATATAATATAATCATCA TGATTTATACTGAATTCAGCactaaggcgagaccaatttaatttgttgtt ctacgggcagattgttagcaaaatatgggtcggtcggtaggtaaaataaa aataaatttttcatttatcagggttggttaagtaacaaaaatgttttcca aaaaatatctggttcaaaagtgtttttttatcttcgatgaacatcataat aaaatcttagtgtatggaatgcttgatttcctaaatttttcaatttcttg aattaattttcagctttattcgaatttgattcttacaaataagtATACAT TgcagtggaaattcaatattattatttttttgattttagctaaaATAGGC ACAGGAAAAAATGATCTTATCCCAAGGTtggaactttttatttttccacC CCGGATATTTGTAACTTTCCGACCCGGAAAATGCCATGGGATCGTGAAAC ACCCACCAAGCTAAATTCCGTGTTGGAAAAGTTTTAGTTTCCAAGGTGCG AAATTGTCTAATTCCGACTCGGAAAACAAATTACTAGAAAATTCAAAGGT TGTATTTCGTCAAAACCCGGCAAGAAAACCGCGATTTCCAATGTAAGGTT TTTGAAAATGCGGGTTGGAAAAAGTGGATATTCCAGACATTGTCAATATT ATTCTGAATATTCATATTGGAAAAAGCCCGAAACGCAAGGTCGGAAGTTT GGATATCACACATTTTCCAAGTTGCGAAATTGTCAAATCCCGGTAAGAAA ACAGTGATTTCCAACGTAAGGTTTTGAAAATGCGGGTCGGAAAAAGTTGA TATCCCAGacattgtcaaaaatattttgaatatttatattGGAAAAAGCC CGAAACGCAAGGTCGGAAGTTTGGATATCACACATTTTCCAAGTTGCGAA ATTGTCAAATTCCGGTAAGAAAACGTAAGGTTTTGAAAATGCGGGTCGGA AAATAGATAGTCGATTTAAATAGAAAATGCTCTGACCCatcaaggttgga aatttgaaaattttgacctttataaagaaaattgaaatgattGGAAATTA ATCTAAATTCATTTAATTAAGAAATGGCTAAAAATAAGGTAGATCGGAAA AATCTAGTCATTAAATTTTCAACGTTATatttaatttagaaatattattt tcaattagaATTAAAAAGCTATGTAACATAagcataaataaaaaatctta tcaGATTAGTTAgcaaaaataataaatcttGATTAATAACATACAATGTG GCGTAGAAATTTATAAATATTAGCTTCAATTAGAATTAAAAAGGTATATG TCACACAAGCATAAATAAACCCTAGGGttggtcgggcccgtagaacaaca aattaaattggtctcgcctaatatTTTTGAATGGTTTTTCCTTTTATTTC AGCCACATATCAAAGACAAAATTGAGAGAAACAGCTTTGCAGAAAGACTC AAATTATGTGTGGTTTGTTGACAATATTGACACAACCGtccttaaaaaca aatattgtTATGACAGGTATTGTGGATTTTACTTCACACGAAATAatact tttataagaataatgaggcttgaaatcgtcaaaaaaaattatattcaaat taaaatagaaggtaaaaacagtaaaGATTAGCTGGTATTAACACAAAATA ACTCAAATAAGAACAGGATTACTTGAGGACCCATTCTCAATTTGATTAAA GCCAGATTGACAGTATAAAAAGTGAGGTATGAAAAGTGCTGAGCTTGCAA AAAATTGCGATTTTTTTTGGCAATAGAATGTTTCCTTTCTAAAGTTACAT TTTAGAGATCATTAAAATTTGGCACGTTTTGACCTTAAAACATGCAGCGT AAGAATATAAACGAATGGTCTACATTtctgtttgaaaaaagaaatttcta cATTGCTGCTTGTGCGAGATCAGCACACAAGTTCATATATATATATTGCG TTTAAAACtcgaaaataaataattttatttttgaaatcttatcTGACCAT TTTCAGGATAATTGGTTATGGGAATATTATGGAGAATATTCAATTGGATT CAGTAAAAGCATTTCGATTCGATGATGAATTTGGTCTATCTATGGACGAG GTAAAGAGTTTTGCGAAGCTCAGTACGTTAGTATAACGTTGAATGAACAT TAAGTAAACCTTGAGTTCCAACTCAGTCACTGAATTTAACGAAAGTTTGA TTTTCAAAGGCTTCTGTGGCCTTAGTGTCTGCCTTCAAATTGTAACCCAA TGGACGCAGAATTTAACGTGATTTCAAGAATGCATTAAAAAGGCAagcaa aagtttcaaaatcaaaagttatggttcTTTTTAAAGTATTACCAGATACT ACCGGTAGTTTTCATCGAATCCCCATAAGGGAATCATAGCCACTTAACTC TAACgataaattagatttttttctctgtATATACTGGAAACTAATTTTTC AGATAAGAGCTGCATATAAAATGCTTGGGAATTAACAGAAATTccttttt cagtattttagaaaatttcaccATGTTATACCCTCTTTTTAGGCAAAAGC CATAACTGACCACTATCCAGTAGAAGTCGTCATAGGTAGGTTATCATTTT GAGCTGATGTAATGTAGTCCCTTTGAgatgttgaaaaaaattgactcGCA GTTGATTCTAGCTATTTGCTCTCGAACTGTTCAACTTATTTAGTAGAGCT AAAGGAATACTGAAGAATACTAAAGTATTTTATGACGCTTAGggaaaaaa tttgttcaaataagaatttctttcaaaaacctTCTTTCTCTTACTCTTAT TCTTCCCTATTTattcttttgaatattttcaggtCCAAAAGTTTTTTCGA ATGATGTCGAGGAAAAGCCAGCTAACAGGTAATCTAAATTACTTTAGACA TATGACTTTCTgtgccggggggggggtacttaggcaaatggagggtacgg tatgtgccgcccttaagggtacctttttggactttggactttaaaagtcc cgctaagggtcggaaaaatcaaaaaatcaaatttcagtcccgctaagggt cggaaaaataggaaatttcaattttttaccccctgaaagatcgaaatttg gtcaaaattggtcaaatttgtcccgctaagggtcgcaaaattcccaaaat tttcctttgttttctccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccgtcagctcgc aaccctagtccccccccccgggcttgcTGTGCAAACGGGGCACGGTATAA AGAGTCTTCTAGTTTCAGGATAACATGGCCATGCTTTCATCATGTAAGAA TAATCACTGTAACAATGAAATCTCAATGGATTGAGATTTAATAGGTAGAC ACAAAAAATAGTTCAAAATAGTTCTTTGCTAAATTGTCTCAAACTCTAAA GCTGCCATTTTAAATTTCTATGAGTACGTTTTAATGTTCCAGGTCAAATT TTCATCAGCAAATTAAATCTTTGTCATATACATCAATTGTGTTTTTGCTA TTATTTTTGTGATAATCTCATAACAATGATCCACCACGCTCTGTTCTAAA GGGATAAGGCGAATGTGacgatctgacctggttgttcaTTCAAAACGATC AAAACCGCGTTGccttttgtttgaaaacgaaagcgaaaccGAAaccgact gggttctaatgtttatgcAATTGTTTATGTATATGATTGACAGTTGATTT tggttcgttttttttttagtttagcAAATCAGCGCGATCAAGAACTCAAA ctggatgaaaaagatgaaagcgGCTCGCCAACCTGGGCTaattctcttac ggagccatggtctttagagtgaatacgtgcCGTGCGCGGAGTATTTGAAT CTGCTTGGAGATAACTGTCGCCCAGTTCTCAGATTAGGCAACAGTAATGG AGTAttagtttttatttgttttattagtttcattgattttttattAGCTT CAGTTACGCCATTGACAACAACGATCTTAACGACATCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029783XLOC_029783Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046666-exon-scaffold_116-1491911889:647135..647624TCONS_00046666-exon-scaffold_116-1491911889:647135..647624Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:647135..647624TCONS_00046666-exon-scaffold_116-1510915933:647135..647624Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:647135..647624TCONS_00046666-exon-scaffold_116-1575043694:647135..647624Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:649801..649969TCONS_00046666-exon-scaffold_116-1491911889:649801..649969Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:649801..649969TCONS_00046666-exon-scaffold_116-1510915933:649801..649969Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:649801..649969TCONS_00046666-exon-scaffold_116-1575043694:649801..649969Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:650281..650369TCONS_00046666-exon-scaffold_116-1491911889:650281..650369Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:650281..650369TCONS_00046666-exon-scaffold_116-1510915933:650281..650369Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:650281..650369TCONS_00046666-exon-scaffold_116-1575043694:650281..650369Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:650743..650826TCONS_00046666-exon-scaffold_116-1491911889:650743..650826Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:650743..650826TCONS_00046666-exon-scaffold_116-1510915933:650743..650826Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:650743..650826TCONS_00046666-exon-scaffold_116-1575043694:650743..650826Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:651102..651205TCONS_00046666-exon-scaffold_116-1491911889:651102..651205Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:651102..651205TCONS_00046666-exon-scaffold_116-1510915933:651102..651205Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:651102..651205TCONS_00046666-exon-scaffold_116-1575043694:651102..651205Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:651751..651898TCONS_00046666-exon-scaffold_116-1491911889:651751..651898Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:651751..651898TCONS_00046666-exon-scaffold_116-1510915933:651751..651898Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:651751..651898TCONS_00046666-exon-scaffold_116-1575043694:651751..651898Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:653387..653500TCONS_00046666-exon-scaffold_116-1491911889:653387..653500Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:653387..653500TCONS_00046666-exon-scaffold_116-1510915933:653387..653500Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:653387..653500TCONS_00046666-exon-scaffold_116-1575043694:653387..653500Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:653991..654084TCONS_00046666-exon-scaffold_116-1491911889:653991..654084Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:653991..654084TCONS_00046666-exon-scaffold_116-1510915933:653991..654084Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:653991..654084TCONS_00046666-exon-scaffold_116-1575043694:653991..654084Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:654527..654569TCONS_00046666-exon-scaffold_116-1491911889:654527..654569Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:654527..654569TCONS_00046666-exon-scaffold_116-1510915933:654527..654569Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:654527..654569TCONS_00046666-exon-scaffold_116-1575043694:654527..654569Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:654817..654862TCONS_00046666-exon-scaffold_116-1491911889:654817..654862Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:654817..654862TCONS_00046666-exon-scaffold_116-1510915933:654817..654862Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:654817..654862TCONS_00046666-exon-scaffold_116-1575043694:654817..654862Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1491911889:656138..656173TCONS_00046666-exon-scaffold_116-1491911889:656138..656173Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1510915933:656138..656173TCONS_00046666-exon-scaffold_116-1510915933:656138..656173Clytia hemisphaericaexon
TCONS_00046666-exon-scaffold_116-1575043694:656138..656173TCONS_00046666-exon-scaffold_116-1575043694:656138..656173Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:647135..656173 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.04386 0 0 3.02645 1.83391 2.04991 2.42246 0.670281 0.418199 1.22882 1.19867 0.120576 0.513767 0.662001 0.565312 0.982055 0.895455 0.287212 0.531518 0.713652 0.371949 0 0.213761 0.894231 0.896394 0.0612299 0.0574059 0.132772 0.100569
Blast
BLAST of TCONS_00046666 vs. Swiss-Prot (Human)
Match: DNAS1 (Deoxyribonuclease-1 OS=Homo sapiens GN=DNASE1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.476e-41
Identity = 85/260 (32.69%), Postives = 134/260 (51.54%), Query Frame = 3
Query:  576 SATIATFSINRFNQKKYENNEVKEYLLKILSRYDFIFIQEVQDESEEFIHLFIEELKGMTGKSYKYKLGKASGRKSKKNQLMFLYRDSLFTLIDHYQYQD-----NDDKFERQPFIAKFRSNKLEVEEFAVIGVCLHYDSVEAEINHLASVHEEMKNFWGDIPTLIMGNFMTGGSHISKTKLRETALQKDSNYVWFV-DNIDTTVLKNKYCYDRIIGYGNIMEN-IQLDSVKAFRFDDEFGLSMDEAKAITDHYPVEVVI 1334
            S  IA F+I  F + K  N  +  Y+++ILSRYD   +QEV+D     +   ++ L      +Y Y + +  GR S K + +F+YR    + +D Y Y D      +D F R+P I +F S   EV EFA++ +        AEI+ L  V+ +++  WG    ++MG+F  G S++  ++     L     + W + D+ DTT       YDRI+  G ++   +  DS   F F   +GLS   A+AI+DHYPVEV++
Sbjct:   22 SLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVML 281          
The following BLAST results are available for this feature:
BLAST of TCONS_00046666 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNAS12.476e-4132.69Deoxyribonuclease-1 OS=Homo sapiens GN=DNASE1 PE=1... [more]
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