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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046618 ID=TCONS_00046618|Name=TCONS_00046618|organism=Clytia hemisphaerica|type=transcript|length=1077bp
TTGTtttaaaagacaaatcaataataCAATGTTATCATTAAATTATGCTT
GAGttattagttattcaaaagactacTGTTGCTTTCTCCTAAACAACTAT
TCGGTGATAGGTATCTGGTTGTTTAAATGTTAATATGTAAAACCTTCTGA
GTATCCTGCTTAAAAAATCACTCTAACTAATTTTTggaccagatagttgc
tataTCAGAATTATACAAGGTATGTTACCTCATTGAGCATGAGACTCGCG
CACTCAAGATTGTCTCCAATTTCTGGGaaatggcatgggttgaccggttc
attcacttgccaagtgaaccgctgcaagtgggaatcgaatctcagtcgcc
tgtgcagtaaccaaggtcaatgaccacttaTACCACAGTGCATTTCAAAG
CGCCCTTTAAAGAGCCATACCAAATGGCCAATACGCAAGCAACCTTCTTG
GTTTATAAACCCAACACACCTTCTAACTGATTGTGCCACCGAGACAGGCC
AGAATCTGGTTATTGACAATTAGTTACAGCTGAAGTTTACAGACCTTATA
ATTAAAATAGATCCGAATCCtaaaattacacttttttaatataagaacaa
tgttACAAGATcaataaggctcaaaatcgccaaaacataagaacaattta
agaacaaatgaacggtggaaaaaagtgttaattaaaaaagcattttttgc
ggcaagttcgaaacgcaggttcaggattcaggttacaggttcaggttaca
ggttaaatcttttttgatggaaatttcaaaaataaaatatcccaACGATT
AGAGTGGAGCTTTGCGGTTTTGACAATATATAAATTATTCTATAATTGTT
AGTAGTCATTGAATGATCATACAAAGTAAAATgcctgtttttattttgaa
acgcATTCAATTTACTGACTTAATATTCATTTTACAGACGGTGCGTTTTG
TTTTCTCATTTCAAAACGAATAGCGAGAAAAGATTACATAATCTAATTAC
ATAACttttgaatatgaaaatgaaatgtgAGCCATGTGAGCCATCAATTT
GATTATTCGAATTTTCTGTATACATGT Run BLAST on NCBI transcript from alignment at scaffold_115:2588..3664 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046618 ID=TCONS_00046618|Name=TCONS_00046618|organism=Clytia hemisphaerica|type=transcript|length=1077bp|location=Sequence derived from alignment at scaffold_115:2588..3664 (Clytia hemisphaerica)
ACATGTATACAGAAAATTCGAATAATCAAATTGATGGCTCACATGGCTca
catttcattttcatattcaaaaGTTATGTAATTAGATTATGTAATCTTTT
CTCGCTATTCGTTTTGAAATGAGAAAACAAAACGCACCGTCTGTAAAATG
AATATTAAGTCAGTAAATTGAATgcgtttcaaaataaaaacaggcATTTT
ACTTTGTATGATCATTCAATGACTACTAACAATTATAGAATAATTTATAT
ATTGTCAAAACCGCAAAGCTCCACTCTAATCGTtgggatattttattttt
gaaatttccatcaaaaaagatttaacctgtaacctgaacctgtaacctga
atcctgaacctgcgtttcgaacttgccgcaaaaaatgcttttttaattaa
cacttttttccaccgttcatttgttcttaaattgttcttatgttttggcg
attttgagccttattgATCTTGTaacattgttcttatattaaaaaagtgt
aattttaGGATTCGGATCTATTTTAATTATAAGGTCTGTAAACTTCAGCT
GTAACTAATTGTCAATAACCAGATTCTGGCCTGTCTCGGTGGCACAATCA
GTTAGAAGGTGTGTTGGGTTTATAAACCAAGAAGGTTGCTTGCGTATTGG
CCATTTGGTATGGCTCTTTAAAGGGCGCTTTGAAATGCACTGTGGTAtaa
gtggtcattgaccttggttactgcacaggcgactgagattcgattcccac
ttgcagcggttcacttggcaagtgaatgaaccggtcaacccatgccattt
CCCAGAAATTGGAGACAATCTTGAGTGCGCGAGTCTCATGCTCAATGAGG
TAACATACCTTGTATAATTCTGAtatagcaactatctggtccAAAAATTA
GTTAGAGTGATTTTTTAAGCAGGATACTCAGAAGGTTTTACATATTAACA
TTTAAACAACCAGATACCTATCACCGAATAGTTGTTTAGGAGAAAGCAAC
AgtagtcttttgaataactaataaCTCAAGCATAATTTAATGATAACATT
GtattattgatttgtcttttaaaACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046618-exon-scaffold_115-1491911889:2588..3664 | TCONS_00046618-exon-scaffold_115-1491911889:2588..3664 | Clytia hemisphaerica | exon |
| TCONS_00046618-exon-scaffold_115-1510915933:2588..3664 | TCONS_00046618-exon-scaffold_115-1510915933:2588..3664 | Clytia hemisphaerica | exon |
| TCONS_00046618-exon-scaffold_115-1575043694:2588..3664 | TCONS_00046618-exon-scaffold_115-1575043694:2588..3664 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_115 | supercontig | scaffold_115:2588..3664 . |
Blast
The following BLAST results are available for this feature:
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