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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046495 ID=TCONS_00046495|Name=TCONS_00046495|organism=Clytia hemisphaerica|type=transcript|length=781bp
GGTGTGAGAAAGTGATTCCTTTAAGTGAGAAACCACCACGATTGACAACT
ATTTCTAACTCGTCGGCACGTTGAGTAGCCATTTGCATTGATTTTTCTCC
TGATAGACAGTCGTCCACATAGATGTCTTTCATGATGATTGAAGCAATTT
CTGGGTAATCTTGTGAGGACAGTTGTCCGGTTTCCCTCAGGGCTCGCTCG
GATTGGTTTCCTGAAGATTTGACGCCATAAACAAGTGTTTTAATTACCTT
CTCTTTTGGGATCTTTTTCTGGTCAAGGTTTTCTCCCCATATATAACGTT
GTAAGCACCAATGATGTTCGCGAAGACGGACTGAATTATACATCTTCCTA
ATGTCGGTGTGGAAAACTGTATGATGTAGCGACCATCGTATGAGAATCTC
AACCAGTCGGTTCATGTTGTTTGTTCCCTTCGCAAGGATGTCGTTCAGAC
TGTATCCTGAATCAGTTGGTTGCGATGCATCAAATACAATTCTGCAGGGT
GTTGATATGGAGTTTGGCTTCCATACCGCTCTCCACGGAATGAAATTGAG
TACTTTAGTATTAGATAGCatatgttgttgttgtggtgtgAGGTTCTCTA
CGTAGTCAACGTATCCCATTGCTTGGAGTTTGGCTTCTGGTGCAATGACA
TCTGCTTTGTCGGTTGGTTCTTTGTCTAACTTTCTCAATTGTTGGAAGTA
GACTTTCAGTGCTTTATGTTTGTTGTTGGCCAGCTTGGTCTCTGGGTTGT
GAAGGAGTGGTAAGTTTGCATGTGATACGCA Run BLAST on NCBI protein sequence of TCONS_00046495-protein >TCONS_00046495-protein ID=TCONS_00046495-protein|Name=TCONS_00046495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
CVSHANLPLLHNPETKLANNKHKALKVYFQQLRKLDKEPTDKADVIAPEA
KLQAMGYVDYVENLTPQQQHMLSNTKVLNFIPWRAVWKPNSISTPCRIVF
DASQPTDSGYSLNDILAKGTNNMNRLVEILIRWSLHHTVFHTDIRKMYNS
VRLREHHWCLQRYIWGENLDQKKIPKEKVIKTLVYGVKSSGNQSERALRE
TGQLSSQDYPEIASIIMKDIYVDDCLSGEKSMQMATQRADELEIVVNRGG
FSLKGITFSH Run BLAST on NCBI transcript from alignment at scaffold_112:53713..54493 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046495 ID=TCONS_00046495|Name=TCONS_00046495|organism=Clytia hemisphaerica|type=transcript|length=781bp|location=Sequence derived from alignment at scaffold_112:53713..54493 (Clytia hemisphaerica)
TGCGTATCACATGCAAACTTACCACTCCTTCACAACCCAGAGACCAAGCT
GGCCAACAACAAACATAAAGCACTGAAAGTCTACTTCCAACAATTGAGAA
AGTTAGACAAAGAACCAACCGACAAAGCAGATGTCATTGCACCAGAAGCC
AAACTCCAAGCAATGGGATACGTTGACTACGTAGAGAACCTcacaccaca
acaacaacatatGCTATCTAATACTAAAGTACTCAATTTCATTCCGTGGA
GAGCGGTATGGAAGCCAAACTCCATATCAACACCCTGCAGAATTGTATTT
GATGCATCGCAACCAACTGATTCAGGATACAGTCTGAACGACATCCTTGC
GAAGGGAACAAACAACATGAACCGACTGGTTGAGATTCTCATACGATGGT
CGCTACATCATACAGTTTTCCACACCGACATTAGGAAGATGTATAATTCA
GTCCGTCTTCGCGAACATCATTGGTGCTTACAACGTTATATATGGGGAGA
AAACCTTGACCAGAAAAAGATCCCAAAAGAGAAGGTAATTAAAACACTTG
TTTATGGCGTCAAATCTTCAGGAAACCAATCCGAGCGAGCCCTGAGGGAA
ACCGGACAACTGTCCTCACAAGATTACCCAGAAATTGCTTCAATCATCAT
GAAAGACATCTATGTGGACGACTGTCTATCAGGAGAAAAATCAATGCAAA
TGGCTACTCAACGTGCCGACGAGTTAGAAATAGTTGTCAATCGTGGTGGT
TTCTCACTTAAAGGAATCACTTTCTCACACC Coding sequence (CDS) from alignment at scaffold_112:53713..54493 >TCONS_00046495 ID=TCONS_00046495|Name=TCONS_00046495|organism=Clytia hemisphaerica|type=CDS|length=780bp|location=Sequence derived from alignment at scaffold_112:53713..54493 (Clytia hemisphaerica)
TGCGTATCACATGCAAACTTACCACTCCTTCACAACCCAGAGACCAAGCT
GGCCAACAACAAACATAAAGCACTGAAAGTCTACTTCCAACAATTGAGAA
AGTTAGACAAAGAACCAACCGACAAAGCAGATGTCATTGCACCAGAAGCC
AAACTCCAAGCAATGGGATACGTTGACTACGTAGAGAACCTcacaccaca
acaacaacatatGCTATCTAATACTAAAGTACTCAATTTCATTCCGTGGA
GAGCGGTATGGAAGCCAAACTCCATATCAACACCCTGCAGAATTGTATTT
GATGCATCGCAACCAACTGATTCAGGATACAGTCTGAACGACATCCTTGC
GAAGGGAACAAACAACATGAACCGACTGGTTGAGATTCTCATACGATGGT
CGCTACATCATACAGTTTTCCACACCGACATTAGGAAGATGTATAATTCA
GTCCGTCTTCGCGAACATCATTGGTGCTTACAACGTTATATATGGGGAGA
AAACCTTGACCAGAAAAAGATCCCAAAAGAGAAGGTAATTAAAACACTTG
TTTATGGCGTCAAATCTTCAGGAAACCAATCCGAGCGAGCCCTGAGGGAA
ACCGGACAACTGTCCTCACAAGATTACCCAGAAATTGCTTCAATCATCAT
GAAAGACATCTATGTGGACGACTGTCTATCAGGAGAAAAATCAATGCAAA
TGGCTACTCAACGTGCCGACGAGTTAGAAATAGTTGTCAATCGTGGTGGT
TTCTCACTTAAAGGAATCACTTTCTCACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046495-exon-scaffold_112-1491911889:53713..54493 | TCONS_00046495-exon-scaffold_112-1491911889:53713..54493 | Clytia hemisphaerica | exon |
| TCONS_00046495-exon-scaffold_112-1510915933:53713..54493 | TCONS_00046495-exon-scaffold_112-1510915933:53713..54493 | Clytia hemisphaerica | exon |
| TCONS_00046495-exon-scaffold_112-1575043694:53713..54493 | TCONS_00046495-exon-scaffold_112-1575043694:53713..54493 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_112 | supercontig | scaffold_112:53713..54493 . |
Blast
The following BLAST results are available for this feature:
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