TCONS_00046484 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046484
Unique NameTCONS_00046484
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046484 ID=TCONS_00046484|Name=TCONS_00046484|organism=Clytia hemisphaerica|type=transcript|length=167bp
GCGAGGGGAGTATACATTGTGTCTTTCAATTATGTTTTCTAGGTAACCTA
ACTCGAGTAGAGATAACTCAAAAGAACAGTGAGCAAAAGAAGCAGAGGCG
GATTAGAAAAGCAATTCAAAAAGCTGAATTGGAAGAGGCTTAGCAGGCAG
GACAAGAAAGATTAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_111:32809..32975

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046484 ID=TCONS_00046484|Name=TCONS_00046484|organism=Clytia hemisphaerica|type=transcript|length=167bp|location=Sequence derived from alignment at scaffold_111:32809..32975 (Clytia hemisphaerica)
CTCTAATCTTTCTTGTCCTGCCTGCTAAGCCTCTTCCAATTCAGCTTTTT
GAATTGCTTTTCTAATCCGCCTCTGCTTCTTTTGCTCACTGTTCTTTTGA
GTTATCTCTACTCGAGTTAGGTTACCTAGAAAACATAATTGAAAGACACA
ATGTATACTCCCCTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029669XLOC_029669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046484-exon-scaffold_111-1491911889:32809..32975TCONS_00046484-exon-scaffold_111-1491911889:32809..32975Clytia hemisphaericaexon
TCONS_00046484-exon-scaffold_111-1510915933:32809..32975TCONS_00046484-exon-scaffold_111-1510915933:32809..32975Clytia hemisphaericaexon
TCONS_00046484-exon-scaffold_111-1575043694:32809..32975TCONS_00046484-exon-scaffold_111-1575043694:32809..32975Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_111supercontigscaffold_111:32809..32975 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046484 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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