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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046477 ID=TCONS_00046477|Name=TCONS_00046477|organism=Clytia hemisphaerica|type=transcript|length=1173bp
ggggggggggtacttagacaAATGGAGGGAACGGTATGTGCCGctcttaa
gggtaccttttttagatttctaaGGTCCCGCTAAAggtcagaaaaatcag
aaaatcccactaagggtcggagaaacaggaaaatttcaactttttacccc
ggaaagatcgaaatttggtcaaaattggccaaatttgtcccaataagggt
tgtaaaattcacaaaatattcctttctttttctcctttttagtcccggta
agagtccaagggtcgaaagtcgggtggcacccccgtcagctcgcaaccct
agtacccccggggtACAAGACAAGGTAGTTTTCGAGTTGACAAGTTGCTA
GTCTCTCTTGCTGGGAAGTCACTCGCCAGCGGCAACATATCTGTGCAAAA
TAATTACACATCTGTGcataaaaatttgcaaattgcGAATTATATGTATT
AAAGATTATTTATTTCTTGGTGACCTCGAGTCCATATATTTAATTCAATC
TTGTAATACTATNAAATTTGCAAATTGCGAATTATATGTATTAAAGATTA
TTTATTTCTTGGTGACCTCGAGTCCATATATTTAATTCAATCTTGTAATA
CTATCTATTATTTACAATAATTTGTACCTGTGCgattttaaataaattag
attgtaaaatttagaAGAACATTCTTTTAATCCTGTCGGGATATTTCATC
CTAGATTGCATCGTCTTAAATTAATCAGTAAATTTCGCATGTAAAAAAAG
TCGATTACGATTTCAGAAACAGGcaactttttagcaaaaaatggTTTCTT
GAATTTCAACgtaaaacaattttcaatttagtttcGTACAATCTAAAGAA
TCAATAGGAAAATCCAGAAAGTCCAGATCACTAGTAGATGAAACATACCT
ACCTATCTATTACcataaaattttaatgaaagatttttgaattgGAAAAC
GAAAACAGGCAAAATATAAAACAGCTCCACAGGATTCGcggtaaatattt
ttaaaattatttgacAACTAATCGTTTCAATCTACTATATATTCTAGATA
TCCCTTAATTCAGATTTTTGTCACGAAACTACAGGGGGCCTAAAGGTCCA
AGGGAGTAAAGAAAACACAACAATTTCGAATAAACGAGTGGTGAATTACC
ATGTAAGGTTCAGTATTGGAAGG Run BLAST on NCBI transcript from alignment at scaffold_110:278519..279691 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046477 ID=TCONS_00046477|Name=TCONS_00046477|organism=Clytia hemisphaerica|type=transcript|length=1173bp|location=Sequence derived from alignment at scaffold_110:278519..279691 (Clytia hemisphaerica)
CCTTCCAATACTGAACCTTACATGGTAATTCACCACTCGTTTATTCGAAA
TTGTTGTGTTTTCTTTACTCCCTTGGACCTTTAGGCCCCCTGTAGTTTCG
TGACAAAAATCTGAATTAAGGGATATCTAGAATATATAGTAGATTGAAAC
GATTAGTTgtcaaataattttaaaaatatttaccgCGAATCCTGTGGAGC
TGTTTTATATTTTGCCTGTTTTCGTTTTCcaattcaaaaatctttcatta
aaattttatgGTAATAGATAGGTAGGTATGTTTCATCTACTAGTGATCTG
GACTTTCTGGATTTTCCTATTGATTCTTTAGATTGTACgaaactaaattg
aaaattgttttacGTTGAAATTCAAGAAAccattttttgctaaaaagttg
CCTGTTTCTGAAATCGTAATCGACTTTTTTTACATGCGAAATTTACTGAT
TAATTTAAGACGATGCAATCTAGGATGAAATATCCCGACAGGATTAAAAG
AATGTTCTtctaaattttacaatctaatttatttaaaatcGCACAGGTAC
AAATTATTGTAAATAATAGATAGTATTACAAGATTGAATTAAATATATGG
ACTCGAGGTCACCAAGAAATAAATAATCTTTAATACATATAATTCGCAAT
TTGCAAATTTNATAGTATTACAAGATTGAATTAAATATATGGACTCGAGG
TCACCAAGAAATAAATAATCTTTAATACATATAATTCgcaatttgcaaat
ttttatgCACAGATGTGTAATTATTTTGCACAGATATGTTGCCGCTGGCG
AGTGACTTCCCAGCAAGAGAGACTAGCAACTTGTCAACTCGAAAACTACC
TTGTCTTGTaccccgggggtactagggttgcgagctgacgggggtgccac
ccgactttcgacccttggactcttaccgggactaaaaaggagaaaaagaa
aggaatattttgtgaattttacaacccttattgggacaaatttggccaat
tttgaccaaatttcgatctttccggggtaaaaagttgaaattttcctgtt
tctccgacccttagtgggattttctgatttttctgaccTTTAGCGGGACC
ttagaaatctaaaaaaggtacccttaagagCGGCACATACCGTTCCCTCC
ATTtgtctaagtacccccccccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046477-exon-scaffold_110-1491911889:278519..279691 | TCONS_00046477-exon-scaffold_110-1491911889:278519..279691 | Clytia hemisphaerica | exon |
| TCONS_00046477-exon-scaffold_110-1510915933:278519..279691 | TCONS_00046477-exon-scaffold_110-1510915933:278519..279691 | Clytia hemisphaerica | exon |
| TCONS_00046477-exon-scaffold_110-1575043694:278519..279691 | TCONS_00046477-exon-scaffold_110-1575043694:278519..279691 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_110 | supercontig | scaffold_110:278519..279691 . |
Blast
The following BLAST results are available for this feature:
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