TCONS_00046464 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046464
Unique NameTCONS_00046464
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3974

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046464 ID=TCONS_00046464|Name=TCONS_00046464|organism=Clytia hemisphaerica|type=transcript|length=3974bp
aataaagaacgcgtcatctctattactttaaatgatcaattagtgaagta
acttgtaaaaactccagctatTATAATTGTGTATGAAGCTCGGATAGAGT
ACCACACCTCGATAGCATCTTAGCATTGACTTCAGCTGACTTATTCAGAT
GCTTCAACCTCCACAAAAGAGAATGGGGAATCTTTACCACGCGATTGTAG
TTCTACTAGTAGCAATATCATCGATCCAAAGCAAGATTTATTTGGTCTAC
AAATCTCCTAAGACTGGCAAATGTGGCTATAATGGTTATGTACCAGGAGG
TCTGGGACCATCCATCAAGCGAATCACTTCACCACAAGCAAAGTTACAGG
AACGACAAATGTCAATTTTCGCTTTCAAAGACTCTAGGGTGAATGCTGTT
AAAGACAAATCCCAGCAGTATTATGACAAGctgatttcaatttttggagA
TGTTTGTCCTCAAGTTGGCATTGGGTTCGGCGTCCTTGGTTTAGCAGCCA
TGGTGGAACAAGATCTTTCTCAGAGCGGACCACCAACCATTGAAGAAGTT
GTCAAATCTGTCAATGAAGCATTTGAAGAATTTACCAAAGATGTCAATGA
CCGTTTTGACCGTATGGAACAATATGTCAATCATCAAATCATGAAATCTG
AAAAAGATTTAGTGAACGTTAAATTGAGGTCCATTTTCAAATCTTGGAAA
GATTGTATTGATGAAAAAACTAGGAATGGAGCGATCAGGTGTCAAACGAA
TGCCGTCCAAAAAATGCGAGGTGAGCGGCCATTCTTCTACCCTGGGttca
acaaaaagaaaatctgGTCTTTAAGCAACCGACCGCctgttgatgacgtc
atcaaaatggaaGCCAACTTTATGTTATTTCGTGATTATACTTTGATTAA
TATCATGATGGTTCAAACTCTGGTCAATATTTATCGAGATGACAAGAACT
TGCCGAATGCAAACACTCTGAAAGAACAATACGTCAATCAGCTAAGCGAA
GATGCTAATGATGCAATCGAATACGCagaatttgttttcaaatgGCTGAA
AGATTTGTACGGTGAACGAAGCAAAAACGAATGTAGAGACACTTTGACGT
GCGAACGAAAACAAGAGGGAGATATTTTGAGAGGTGATTGCAGCTGTATT
TTTGCGGCTAATCTTAAAGAAAGATGCCACACacaaattcaaatcaaaac
aaaaggtgATCAAGTGTCACCATTCGTAAGGACAGACATACCAGCAGATT
TGGCCAAATCGAATGCGATGGCGATGAATTACGTTGCTGAGATGTTCTTT
AATTCGGGATCTAGTTACCACGATAACTTTAATGCAAGAGTGTATCGAGT
TTATTTGCTAAGAGATATGGAGACTTATTGGCAAAACGAAATCTTAGATT
TGATTCCAACATGGCGGGACATTGcgaataaagaaaaacaaaatactgGA
ATTAAAACTTCTGGAGAAAGTAAATCGCGTAAAATTGTAAATGTTGGTTC
TGCAGTCCGGGGAGCTCTTGCAAAGCTCGGTAGACGGGATATGATGCCCA
ATTATCAATATTTTGGAAGGCGTAAATACCGTCCCATGAGAGATTATCGG
TATGGAGAAAACACCATGGAAAGTAACGGATTGGAAGAAAGATATGACAC
AATGAGCCGTTTCGACGAAAATCCCGCGTTCGATAATCTCCGTCGTCGTT
CAAGATTCCAGCAAGCGAGTAAGATGAGAGATTTGATGTTGGAACGACAA
CCAAAGAGAATGTTGAGAGATCCTTACCAAGGATATCGTCGTCAAAGATA
TGAGAGATTTTGAAGGAACTCAAAGCAATTATATTTGAACACGAAAAGAC
TTCTTCGAAGAGGAACGCTTAGCATTGGTTACGCACGGTAATAGCTCGTA
AAATTATTCCATTGTTTGCGTACTCTCAAATTCTATGTTTATGTCAATTT
ATAATGTGTACAAACTTTTAATCAAACTGCTATCTAATGTAGACAGTAtg
catatttttgaattttttaaccgATCTCCAATAACCTCAACAAGTTCTTT
TCGTATGCTTCCCAAAACagggttattttcaaaaagtgcttAATTTCTAC
TTTTACTTCCTCAGAAAGGTGGAAAGTCTAAACCAATAGCTCTCATATAT
CTTTCACGCACATCGCATCAATGGTGCATTTTTGCAGGCCATAACAATAG
AACTTGCAACACAGTTCTTTAAGGGAAAGAAACCTGGTCTATGACGATCG
TATTTCTCTTCTTCCATTTCTTAACCATTAAAACAATGTTAACAATTTAA
TGGTAACCAGACTCGCTAGTGCATACAAATGATTTTTTCCGAATTTTATA
ACTTGGCAAGAATACAAACAGATACAAACTcggtgaaattttgtttttgc
aaAGCTAGCCCTGtggatttcaaaacttaaatgGGTAGCCGGGTTAACCG
GGTAGCCAATATTTAAGTGTTTCAATGTAACTTTGCAACAAAACGTAACt
ttattgtaaattttcttAGTAAAcgctcttctcacagacccactgggacc
ttTACCTAATGGAAAAATTAACCAAATCTCGTCCCCAGTGATAAAAgata
tcctccaatttttgtccccactgaaaataatcaaataaatgaATCCTCAC
TCATTATTCCATCTTAACTAAACTTTCTGacttaaaaagaattaaaaaaa
tacgGAAATATCAtagagtttcagtccgttatttttatccccacttacTG
AAAAAACCCTAcaagtctgtgagaaggggtccTGTTTTAGTGGTATGAAT
AAGGAAGAATGTAAACTCTCCTGATTTCTAGCATCTCTGTATGATTCACT
TTCTGAAAAAACCCTAcaagtctgtgagaaggggtccTGTTTTAGTGGTA
TGAATAAGGAAGAATGTAAACTCTCCTGATTTCTAGCATCTCTGTATGAT
TCACTTTCATACTGTATATATCTACTGAAGAAACTAAGATTAACGGCTGT
TTCAAATGTATGTagacactttttcttttttgacaatttAACAGCATGTA
TTAATATTATGTACGTATATTATGTATTAATTACACGCTTGCAAAGATAT
TTCCAATATCTATAATACAATTTTGAAACGGACTTTAGTATGATATTATA
ATTAAATAACGTAGCCGCTAATATTTCGACTAGCGATGAAACTTGAGATA
TTAGTTTTAGATTGCATGCAATTTATGATCTGTGAACATTCAATTTTAAG
TAGGTTTGTTAGTCACAACGGTCAATTTGCATATTACTAATTTGAACGAT
CTTAAGACAAATCAGATCAATTGATTTCTCATAGTACAATTCATTATAGG
CATGGTACTGAcaaatttaacaaataaaatcttttagTGCCTCTACAAAA
CTCGTTTCTAATGATAAAACTTAGTgttattttcaaattgaagTATTTAC
AAAAAGCAAAATTCTTAAAGTGGATGAAAGAAAATAACTAGAAATTTGTA
ACCACTAAACAGtccgaaacaaaaaggttcaaCAAATTTTCTGCGATTAA
ATTTGCAATTTGCTCAAATCTATTCtttcttcaaaaagaaaaatgagatA
TCTTTGTGTTTATATATTACACTCAACTGAACCACAAAAGAGAAGCTCGT
CTTATTAAGGTTAAGTTGAAAATCTTGCGGGaaaacgaaattttcaaaaa
aaatttattcgagCTCCTGGTTATTCTAAGTAAATTCTTATCCACTTTGG
AGCTTCGAATAAACGGGAATCTACTGTACTAGAAATTCCGAAAGATTAGT
AACCATTAAGAATCTTGAAAAACTAGTAATCACTGGCGatagaaaataca
agaaaataaaACAGTTGGTGGTCGCTAGAAATTTTAAATGCAAAAACCTA
GATAGATTTCAATTTGCTACATCTCATTCAATCTTAACGTCTTTGTCTGT
CACGAGccggttgggggggggggg
Run BLAST on NCBI

transcript from alignment at scaffold_110:279793..293969-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046464 ID=TCONS_00046464|Name=TCONS_00046464|organism=Clytia hemisphaerica|type=transcript|length=14177bp|location=Sequence derived from alignment at scaffold_110:279793..293969- (Clytia hemisphaerica)
AATAAAGAACGCGTCATCTCTATTACTTTAAATGATCAATTAGTGAAGTA ACTTGTAAAAACTCCAGCTATTATAATTGTGTATGAAGCTCGGATAGAGT ACCACACCTCGATAGCATCTTAGCATTGACTTCAGCTGACTTATTCAGAT GCTTCAACCTCCACAAAAGGTAGGAAAGTTTTCTGTGTTTAGATTTGTGT TTTAGCTCGGGCAACTGTAATTCAAGCNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGTCACTTATGGCCGACTAAGTTTTGGCCGATCAGGTACACTTTAATAAG AAAAAAGATTGGTTAGAAATTACAGGATCAGATAGACTTCGGAAGATGAA AAAACGAAAATTAAATGTCATCTCATCCAAAGTAAGAGCTGGGTTTACAT CTGGAGAAAATCGATTCAAAAATATAACAGAAATGACGTACTTGATTTCC TTTGATTTCATAGTGGGTGGATCACATTGAAAGTTTCAAACTAATGGCCT TAACCATTGAGTTTAAAGCCCCGAAGGGGCTAGAGTAAAAACTTATGGAT GGGAAATAAAGCTACTTAATTTCCTATCCAGGACGCCCGCAGATTCTACT CTAGTCCTTCGGGCTTTGGCGTAGGTTTGAAGCAGCTCGGAACAATACAA CAATAAACTTAGATAACTAAGCAATTCAGAATAAAATGAATTCACGTCGA TACACACTTCAAGGATTACCTTCTCACTTGATAAAATTATTGTTTTGCCA CAAAATTATGATTTTTGCTTGAAGTTTGTTTGAAATAGGATCACGCGATC GTGCTAACTTAGATAATAAGAGCGACAATGGAGAAAATTCTTTCTTACTT TAAATCAAGCAACTTTAAAGCAACAGTGGCTGCGTTTAGACCAGCCTGGC ATTTGTAATTGCTTGCAGTATTCTTTTGAATTCTATTGTTCCGCGCAATT GTTCGGTTTGTCAAATGCCTAATGATGCCAGCGTGTTGGCATTTCGTTGG CATTTGAAATGCCATTTTGAGCAAAGGAATCCCCTTTTCTGACATTTCAA ATCAAACAAAGGAACCAAAACTAAGAGAAAAAATGACATTTTTGATTTTT TAAAGTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGATTGTAAAATT TGCAAAATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTCAGTCTTAAT AACTGCAATTTTTGAGAAATTCCATGCTTTTCATTGTTTGACCTGTCAAA GTTGAACTTGAGGGAATCACCTTTTCACTAATGACTCTAAAAAGACGATT CCTTAAATGCCATGACAGAAAATACAATGGAAAAGCTATTAAAATCGAAT CCCTCATGAGCAAATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAGC CAGTGGTTCCTTTTTTAAGTTATAATTGATTTTCTCTAAGCTTTCTCATT GGTTGAAATTTTGATAAATGTTGATGCTCTGAATGCTATTTTATCGCAAA CACAAACAATCTATTTTCGGTGTATCTTTGGTTTAATTGGTCATTAAGCC AAGAGAGCTCTAGGGTGGGTTTACATCTGTAGGGGAGAATCGATTAACAC TCCTTTTGTCGATAACAATTCAGAACGTAAACAAAACAAAAGCTCAAAAT CCCTTTTACGAATTCCTTTATAAAAATAATTGATCTTCCCCTCGTTATTG CCTTTGTTACAAGAGGTAGGTTTGGGTACAAAGGACGTAACGAGGAGAAA ATCCATTAAGTTTTGAATTTTTCCAATTCATAAAAAACTGGAAAATAATA TCGATGACGGATGACGATGATGACAACTACGCCGCAAAAGACTTTTTTGA TCAAGCTTTACAATGCAACATAAACTTGTATGGAGGCCAGTTGAAATGTA TAGACGGTTGAATATAGAAAAACCATTATTTCATTCTGTAATAAAATTTG AACCAACCAAAAAGCTTAGAGAAAATCAATTATGGCTTACAAAGGAATCG TGATAGAATCAAAAGAAATCGTGCAATTTTCATTGTATTCCTTAATCGAT TCTCCCCTAGATGTAAACCCACCCCTACCCTTCTCTTGGAGAACAAAAGG TTTAATGACCAATTTTCGACGTTAAATCTGGAATGTTCATATGAAGCGAT CAAAATCTAATGTTAAGCATGAGTCTTCATTGTATATTTTTTACAACCCT TAGAAAGTACTAGAAATTTATGAAAAGGACCGTTGATGAGAATCACTTAT CTATCTAGCGTATGAAAAAGCACCCTAGTAAAATTTGATTAAAAAAATCA TTCAGACACTTTGGTCGTGTTCAGACCAAGGTTTAAAGCAATTAGGTCTA CATGTTTCTTTTATATTCCTTTTGTATTTAACGGCACGCTTCTCATTAGT TAAACCAAAGTTTAAAAAGGAATCACCCTCTGGTTTAGAAAAAAAGTTTT TACGATTTCGTTACAGTTTTCTGAATAGACGAAATCAGAATTCGCTAGTG AAAAGCATACTCCTATTGTAAATGAAGAAAAAAGAACGTGAAATTTATGA CTTAGAGACGCTCGGAGCATCTCTAGCAGTAATGACTTCAACGAACACGA ATTAATGTTTTGCAGAGGGATTCCCTGAAATCTTTTTTGTTTCAAAGTAT CTCAAGAGAGAAGATGACATGATTTCAAGTTAGGAAAGGAGATTCCTCGA GATCGCCAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATA AACAAAACAAAAATTGAAATTTGCAATTAAAATTGAATTTGCAATTAAAA TTGAATTTTCAATTTTTTAACTTGAAAATTAAAAATTGAATATTGCCATC GAAATTCAATTTTTTGCATGAAAAAAATGCATGAAAAAGGGCTCTTTTTT GTTGTTTTCTGAAGTCAATTAGTAGGAAACTCGACTATATCTTTCGATTA AAAAAGTTTTTTGAGAATCTTTTTTCACATTGATGATGTTCTAAGATCAA ACAATCACTCATGTGAAAATGATAATTATAGCACAATTATTCAAGAAGAT GATTTTCTTCTTCTTCATTTTCAATCATCATTTTTCAATTTTTTTGATTT TTTTCTTTTTGATAATATTCCACTCCTGTTTGTCTTTTCAACAAGCATGA AACCGATATTTTATTCGAATTTTATCATATTTTATTTTCTTTCCACTGGA CATCCAAGCTCAAAATTTTAGAAAAAACAAAATTTACCTCAATATACAAA GTTCTAAAATTATAGAGCTTGGTCTCCCTAGAAAATGGAAGTGCAAGCCC ATGTTTCCAAAACTTTCCTAGCCAACCCAGGGCAGCAAAACAGAAATTCA TAAAAAACAGCCTTACAAGATCTAAAACCATTTAAAACATCCAAAGATTA CACCAAAGTCCATAAACAATAGTTTGCATGGAAAATGAACTTGCCTCTGT TTCTTCTTTTTCATGTTTTTATGTAACAGAAAGCTCTATCTTGACTAGCA AGTGGAGGACTATCCTATTTTTTCTTCAGAATTGCTCCGCGCCGTGTGTA GATCGGTCATTACGGCTTTAGCGAAGTGAGCGCGGACTGCATTCTCATGG ACTGCATTCTCATATGAGAATGCAAAACACTCTAGGGAGACCAGGCTGTA AACCAGAACATAAAATATCAAAAACTAGACTGTGAAATAGTTTACAGCCT GGATATCCAGGCTACAAATTATATTGAGACAGACTTTAGTTTTTTTCCTG CTTTAATAAACCGACGAACATCTACATTCATTCTTCTGTGCATCTTGAAA TTTTGTTGTAAGGTACAATACTTTACATTATAGAGAATGGGGAATCTTTA CCACGCGATTGTAGTTCTACTAGTAGCAATATCATCGATCCAAAGCAAGA TTTATTTGGTCTACAAATCTCCTAAGACTGGCAAATGTGGCTATAATGGT TATGTACCAGGAGGTCTGGGACCATCCATCAAGCGAATCACTTCACCACA AGCAAAGTTACAGGAACGACAAATGTCAATTTTCGCTTTCAAAGACTCTA GGGTGAATGCTGTTAAAGACAAATCCCAGCAGTATTATGACAAGCTGATT TCAATTTTTGGAGATGTTTGTCCTCAAGTTGGCATTGGGTTCGGCGTCCT TGGTTTAGCAGCCATGGTGGAACAAGATCTTTCTCAGAGCGGACCACCAA CCATTGAAGAAGTTGTCAAATCTGTCAATGAAGCATTTGAAGAATTTACC AAAGATGTCAATGACCGTTTTGACCGTATGGAACAATATGTCAATCATCA AATCATGAAATCTGAAAAAGATTTAGTGAACGTTAAATTGAGGTCCATTT TCAAATCTTGGAAAGATTGTATTGATGAAAAAACTAGGAATGGAGCGATC AGGTGTCAAACGAATGCCGTCCAAAAAATGCGAGGTAAAATTTGCTATCT TGATTGCTTTGTTACATATAACAAAAGACATCATTACTTAAAAAATATTT TTCTATGTTGCCTTTTCATTCATGCATTTGCGGTCCTAATCTCAAAGGTT ACGATATAGAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGGTTCAACGCTGTGAAGAGGAGGCTTTGTAGAGCTTTGTTAGA TTTTCGAAAACTGTTTACAGAACGTTGTAAACACACACGTTTTAGCGTAT TGATATATAAATTGCTCGCCCAACTCGATTCTATACATTGAGAAAATTCG CTCCTGTTGTATGGCGATTCTGCAACGGAAAAATATGTTGACAGTGCCTA CACTGCTGGGCCTTTACGCCACTTAGGCTTTCTTGTTCTTATTAAAAAAG TCGTCATCTACACGTTTTTTTTTTATAAGAACGTCAAAAAATTTCGAAGC CTTCGGATGTTCTTAGTTTTTTAGATTTGAAGCCTAAAAATGTTCTTTAA ATGTTCTTATTTTCAGCATTTTTTGAGCATTTTGATGTAATTTCTTAAGA AAATGCATGTTTTTANGGGCGCCTTTTATGCTGACTAATTTCTCAGACTG GGGAAGGAGGGTGCAAAAGTTGTACTTTTTGTTTTACTGCTCTGTAACCA AATGGTAGAAGATAAATTAAATGTCCTTTGAAGTTTTTAGCCCAAATATA CTCGAAAGGTCGACAGGAGAGACGGTGTAATGAGATTAAAATGAAAAATC GAGGAAGAAATTATCACTTTTTAGGTGAGCGGCCATTCTTCTACCCTGGG TTCAACAAAAAGAAAATCTGGTCTTTAAGCAACCGACCGCCTGTTGATGA CGTCATCAAAATGGAAGCCAACTTTATGTTATTTCGTGATTATACTTTGA TTAATATCATGATGGTTCAAACTCTGGTCAATATTTATCGAGATGACAAG AACTTGCCGAATGCAAACACTCTGAAAGAACAATACGTCAATCAGGTATA AAATCTAGAGACATCGTACGTGTTTTTATAAGCATTGCACTATTATAAGA TGAGACAAAAATTTAAGCATATGCTAAGCATTACCTCGAGTCTACGAAAA ATATATTTTCCTGATTTTAACTGTTTTTACTAAGATTTTACGGATTTTGA TTCCCTCGATCTAAGCATGCAAGAGCCAATTTTGTATGCTTATAAAAATA TGTGTTACATTACAGATGACACTGGTAAAACTTCCCATAGAAAAAAACCA ACTTTCAAGTTTTGTTTTATTAAGACAGGCCCACAGCACTAAATCAAAAT TTTAAACTGAATATTTTCCAGCTAAGCGAAGATGCTAATGATGCAATCGA ATACGCAGAATTTGTTTTCAAATGGCTGAAAGATTTGTACGGTGAACGAA GCAAAAACGAATGTAGAGACACTTTGACGTGCGAACGAAAACAAGAGGGA GATATTTTGAGAGGTACTAAGCTATCTAATTGATCTTGTAGTGGTTTTCG AATTAAGACATTTTTTGAGTGGGCTGTTTTACGTATTCAAAATAGAGAAA AGATGTCTTCTTCTCTGCAAACACGTTGTAAGTTCGGTTTTCAAAACACT TTCAGGTGATTGCAGCTGTATTTTTGCGGCTAATCTTAAAGAAAGATGCC ACACACAAATTCAAATCAAAACAAAAGGTGATCAAGTGTCACCATTCGTA AGGACAGACATACCAGCAGATTTGGCCAAATCGAATGCGATGGCGATGAA TTACGTTGCTGAGATGTTCTTTAATTCGGGATGTAAGTAATTCTTGCTTT CATTTTAGGAAAAGTTTGTATATCTTACCTTGAGACACTAAAACAATATA AGTATCGGATATTTGCGATTGGCAAAGGTTACCTAGTTTACACCTCGACA ACTTCTAAGCGCTAGGGTTGCATAAACTAATGGGCTCTCTCTCAAAGACT TATTTCGTATTTTTGGATCGTAGGTTTTTCTACCGTGAAATTATTTTTGA TTTTAAACTATTCTAGAAGCTTTCTCTGTTCCACGCTATGAGTAGCTTCC GAAAGGTTTTTTAAAATTATAAAAATCCACTTTTTCATGAATTATAGCTA GTTACCACGATAACTTTAATGCAAGAGTGTATCGAGTTTATTTGCTAAGA GATATGGAGACTTATTGGCAAAACGAAATCTTAGATTTGATTCCAACATG GCGGGACATTGCGAATAAAGAAAAACAAAATACTGGAATTAAAACTTCTG GAGAAAGTAAATCGCGTAAAATTGTAAATGTTGGTTCTGCAGTCCGGGGA GCTCTTGCAAAGCTCGGTAGACGGGATATGATGCCCAATTATCAATATTT TGGAAGGCGTAAATACCGTCCCATGAGAGATTATCGGTATGGAGAAAACA CCATGGAAAGTAACGGATTGGAAGAAAGATATGACACAATGAGCCGTTTC GACGAAAATCCCGCGTTCGATAATCTCCGTCGTCGTTCAAGATTCCAGCA AGCGAGTAAGATGAGAGATTTGATGTTGGAACGACAACCAAAGAGAATGT TGAGAGATCCTTACCAAGGATATCGTCGTCAAAGATATGAGAGATTTTGA AGGAACTCAAAGCAATTATATTTGAACACGAAAAGACTTCTTCGAAGAGG AACGCTTAGCATTGGTTACGCACGGTAATAGCTCGTAAAATTATTCCATT GTTTGCGTACTCTCAAATTCTATGTTTATGTCAATTTATAATGTGTACAA ACTTTTAATCAAACTGCTATCTAATGTAGACAGTATGCATATTTTTGAAT TTTTTAACCGATCTCCAATAACCTCAACAAGTTCTTTTCGTATGCTTCCC AAAACAGGGTTATTTTCAAAAAGTGCTTAATTTCTACTTTTACTTCCTCA GAAAGGTGGAAAGTCTAAACCAATAGCTCTCATATATCTTTCACGCACAT CGCATCAATGGTGCATTTTTGCAGGCCATAACAATAGAACTTGCAACACA GTTCTTTAAGGGAAAGAAACCTGGTCTATGACGATCGTATTTCTCTTCTT CCATTTCTTAACCATTAAAACAATGTTAACAATTTAATGGTAACCAGACT CGCTAGTGCATACAAATGATTTTTTCCGAATTTTATAACTTGGCAAGAAT ACAAACAGATACAAACTCGGTGAAATTTTGTTTTTGCAAAGCTAGCCCTG TGGATTTCAAAACTTAAATGGGTAGCCGGGTTAACCGGGTAGCCAATATT TAAGTGTTTCAATGTAACTTTGCAACAAAACGTAACTTTATTGTAAATTT TCTTAGTAAACGCTCTTCTCACAGACCCACTGGGACCTTTACCTAATGGA AAAATTAACCAAATCTCGTCCCCAGTGATAAAAGATATCCTCCAATTTTT GTCCCCACTGAAAATAATCAAATAAATGAATCCTCACTCATTATTCCATC TTAACTAAACTTTCTGACTTAAAAAGAATTAAAAAAATACGGAAATATCA TAGAGTTTCAGTCCGTTATTTTTATCCCCACTTACTGAAAAAACCCTACA AGTCTGTGAGAAGGGGTCCTGTTTTAGTGGTATGAATAAGGAAGAATGTA AACTCTCCTGATTTCTAGCATCTCTGTATGATTCACTTTCATACTGTATA TATCTACTGAAGAAACTAAGATTAACGGCTGTTTCAAATGTATGTAGACA CTTTTTCTTTTTTGACAATTTAACAGCATGTATTAATATTATGTACGTAT ATTATGTATTAATTACACGCTTGCAAAGATATTTCCAATATCTATAATAC AATTTTGAAACGGACTTTAGTATGATATTATAATTAAATAACGTAGCCGC TAATATTTCGACTAGCGATGAAACTTGAGATATTAGTTTTAGATTGCATG CAATTTATGATCTGTGAACATTCAATTTTAAGTAGGTTTGTTAGTCACAA CGGTCAATTTGCATATTACTAATTTGAACGATCTTAAGACAAATCAGATC AATTGATTTCTCATAGTACAATTCATTATAGGCATGCTTCNAATAAAACA ATCCTCACTCATTATTCCATCTTAACTAAACTTTCTGACTTAAAAAGAAT TAAAAAAATACGGAAATATCATAGAGTTTCAGTCCGTTATTTTTATCCCC ACTTACTGAAAAAACCCTACAAGTCTGTGAGAAGGGGTCCTGTTTTAGTG GTATGAATAAGGAAGAATGTAAACTCTCCTGATTTCTAGCATCTCTGTAT GATTCACTTTCATACTGTATATATCTACTGAAGAAACTAAGATTAACGGC TGTTTCAAATGTATGTAGACACTTTTTCTTTTTTGACAATTTAACAGCAT GTATTAATATTATGTACGTATATTATGTATTAATTACACGCTTGCAAAGA TATTTCCAATATCTATAATACAATTTTGAAACGGACTTTAGTATGATATT ATAATTAAATAACGTAGCCGCTAATATTTCGACTAGCGATGAAACTTGAG ATATTAGTTTTAGATTGCATGCAATTTATGATCTGTGAACATTCAATTTT AAGTAGGTTTGTTAGTCACAACGGTCAATTTGCATATTACTAATTTGAAC GATCTTAAGACAAATCAGATCAATTGATTTCTCATAGTACAATTCATTAT AGGCATGGTACTGACAAATTTAACAAATAAAATCTTTTAGTGCCTCTACA AAACTCGTTTCTAATGATAAAACTTAGTGTTATTTTCAAATTGAAGTATT TACAAAAAGCAAAATTCTTAAAGTGGATGAAAGAAAATAACTAGAAATTT GTAACCACTAAACAGTCCGAAACAAAAAGGTTCAACAAATTTTCTGCGAT TAAATTTGCAATTTGCTCAAATCTATTCTTTCTTCAAAAAGAAAAATGAG ATATCTTTGTGTTTATATATTACACTCAACTGAACCACAAAAGAGAAGCT CGTCTTATTAAGGTTAAGTTGAAAATCTTGCGGGAAAACGAAATTTTCAA AAAAAATTTATTCGAGCTCCTGGTTATTCTAAGTAAATTCTTATCCACTT TGGAGCTTCGAATAAACGGGAATCTACTGTACTAGAAATTCCGAAAGATT AGTAACCATTAAGAATCTTGAAAAACTAGTAATCACTGGCGATAGAAAAT ACAAGAAAATAAAACAGTTGGTGGTCGCTAGAAATTTTAAATGCAAAAAC CTAGATAGATTTCAATTTGCTACATCTCATTCAATCTTAACGTCTTTGTC TGTCACGAGCCGGTTGGGGGGGGGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029647XLOC_029647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046464-exon-scaffold_110-1575043694:293801..293969TCONS_00046464-exon-scaffold_110-1575043694:293801..293969Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:287286..287886TCONS_00046464-exon-scaffold_110-1575043694:287286..287886Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:284075..284295TCONS_00046464-exon-scaffold_110-1575043694:284075..284295Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:283607..283748TCONS_00046464-exon-scaffold_110-1575043694:283607..283748Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:283288..283464TCONS_00046464-exon-scaffold_110-1575043694:283288..283464Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:281430..282972TCONS_00046464-exon-scaffold_110-1575043694:281430..282972Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1575043694:279793..280913TCONS_00046464-exon-scaffold_110-1575043694:279793..280913Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:293801..293969TCONS_00046464-exon-scaffold_110-1510915933:293801..293969Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:287286..287886TCONS_00046464-exon-scaffold_110-1510915933:287286..287886Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:284075..284295TCONS_00046464-exon-scaffold_110-1510915933:284075..284295Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:283607..283748TCONS_00046464-exon-scaffold_110-1510915933:283607..283748Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:283288..283464TCONS_00046464-exon-scaffold_110-1510915933:283288..283464Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:281430..282972TCONS_00046464-exon-scaffold_110-1510915933:281430..282972Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1510915933:279793..280913TCONS_00046464-exon-scaffold_110-1510915933:279793..280913Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:293801..293969TCONS_00046464-exon-scaffold_110-1491911889:293801..293969Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:287286..287886TCONS_00046464-exon-scaffold_110-1491911889:287286..287886Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:284075..284295TCONS_00046464-exon-scaffold_110-1491911889:284075..284295Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:283607..283748TCONS_00046464-exon-scaffold_110-1491911889:283607..283748Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:283288..283464TCONS_00046464-exon-scaffold_110-1491911889:283288..283464Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:281430..282972TCONS_00046464-exon-scaffold_110-1491911889:281430..282972Clytia hemisphaericaexon
TCONS_00046464-exon-scaffold_110-1491911889:279793..280913TCONS_00046464-exon-scaffold_110-1491911889:279793..280913Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:279793..293969 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.504 37.2178 16.6321 15.7272 337.225 258.487 365.88 324.797 95.931 85.7491 117.515 58.039 0 0 0 0 7.73459 13.0351 0 0 15.3841 13.3505 15.3308 14.06 0 0 1.68859e-05 0.958753 6.90501 8.42981
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046464 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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