TCONS_00046443 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046443
Unique NameTCONS_00046443
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length902

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046443 ID=TCONS_00046443|Name=TCONS_00046443|organism=Clytia hemisphaerica|type=transcript|length=902bp
CTACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAA
TCTGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTC
AAAAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATC
TCAGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAA
GAACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAA
ACAAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGA
TTTCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttca
gcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaT
TTCAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaac
CAGTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAG
AAAAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGA
AGAAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAA
CAACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATC
AACCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCC
ATCTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAG
TGGTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagtttt
gaagAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaa
tgtttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAG
GT
Run BLAST on NCBI

protein sequence of TCONS_00046443-protein

>TCONS_00046443-protein ID=TCONS_00046443-protein|Name=TCONS_00046443-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
TETLYSIPPAEKPIIESGKPQMAICMSVGNSTSKEIQKFTTPQNQKSFNL
SRNSSKLLQVSIMEPEEHENTEESFTTSPVVAKQKTGQDVTRTKKSFEEI
SMQVENESPSKEKNVSANEPRSATPKKNLTEFISTIGLSNVTQENVQEKP
VKQSMETQAGSAKVVKKRRSRLKNNNKGPTILEEGVSNRSMRTRSRSNKT
TDIPLAAYCRMINKSINQTMDVNQDDAGVEKHPSPISKDTEESFTTSPVV
VKQKTGKDVTRTKKSFEEISMQVENESPSKEKNVSANEPRSATPKKNLTG
Run BLAST on NCBI

transcript from alignment at scaffold_110:38955..50960+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046443 ID=TCONS_00046443|Name=TCONS_00046443|organism=Clytia hemisphaerica|type=transcript|length=12006bp|location=Sequence derived from alignment at scaffold_110:38955..50960+ (Clytia hemisphaerica)
CTACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAA
TCTGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTC
AAAAGGTTTGAGATGTTTCACTATCTATTATTGCAGTTTAAGCTATTGTC
ATAATTCAGGAATTTATAAAAGTTATGTCCTGTTTTATTAACAATATGAT
TGTTTTCATATTGCAAATAAACACTGTATTTCCTTCATATTATATTGTAA
TTCATTGATCACTTCGATTAATGTTTTATGTATtatattttatgtatttt
atgtATGTCTTATGTTTTATGAAAAGTGAGAGttcgaaatattgtttaaa
ataaaatttatgtgaAGAATGACCATTTGAACGTACATaaatcattgaaa
acattcATCTGAAGTATGTCAATTCAAGAATTCGATTAAtgtttttctac
atctttttcAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCT
TTAATCTCAGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAA
CCAGAAGAACATGAAAGTATGAACTAGCAATTTTTAACACGTCTGGTACC
TTAAAGTTGTTCAGTCTCAAAATTCACCAGGAAAAGTTCCAGGAATGTGC
TGTGTAtaatccattttccgtctctGACAAAAAACCTTGCTTTGGCCAAT
GCTTAATAGGAAACTTAACTTTTTCAGACCTTTATCCCTCCATGTGAATT
AATAGTAAATGTCTGCACAAATAAggtgtttattttgaaatgcaaaTTGT
TACACATaaaagaaattcatcaaaacaaaacaaatttattcatatatcaa
ttttaaaaacacatTTATTTTCTGTAAAATACGAAACTTTTCGTATGACA
AAGTTACATTATAAAGTAGGTATATGTTGACATGGCTTGttgattgataa
atttattcatcTTCATTGATAGTGAAGTAAAGTAAAGGATGGATTCCACT
TTTTTAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAACA
AAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaaggTAAGT
AAGTTTAACAAGACAAGTGCTTTATCAGTAAAGGCGACCATGAAAAATTA
CTCTAATCAAAAGTCCAACACCACTTTCTTTTGCTGTCTTTGAACTTCTA
ACTATGAGTTTGTTAGTAACGATTAAAAAATTACAGTCAGAATTTAAATC
TGTTAAATTTACTCTTTCAGAGATTTCGATGCAAGTTGAGAATGAGAGCC
CTTCCAAagaaaagaatgtttcagcaaATGAACCAAGAAGTGCGACTCCA
AAAAAGAATCTAACAGGTGAATTATAATTCCTTCAAACCTAGAAAGATTA
ATAGTGAGTCTTGTTCTACCATTTCATTAAGATTGTTGAGTCATATGTTT
TGTGAAAGTTAGGAATAACAAATTCTGTCTGAAATGGCAATGGCCTAAAA
CTAAAGTTTGATATTAAAGCGTCTATTAAACATGAGATTTTTGACACCAC
TATAGTATCATCTACTCTCATAGTTTGAAATTGATTCAAAAgaccttttt
cataaattatgtcacAAGCAACGCTTACCTCCTTTTCAAAGTATTCCTTT
GGTAATTGATTCTCAGAGGAGCCCATTAGCAATTTACTTAAAGGATATAA
TCATCTTtttaatggtttcaaaacgaggcagcgATTGAACCAAGAACTCA
AAATAGTTCATGAAAAAGCCTAATAATCCTTACCTGTTTCTCACTCACCC
TTTCGAATTCGAAACTAACTTCATAACTCCATTCATAATGGAACCAACAC
aactttatttcaatttttcatagaatttaTTTCAACTATTGGTCTCTCAA
ATGTCACacaagaaaatgttcaagaaaaacCAGTTAAACAAAGCATGGAA
ACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAAAAGACGGTCTAGgctaaa
aaataacaacaagGGACCCACTATACTGGAAGAAGGTGTATCAAATCGTT
CAATGAGAACTCGATCGCGGTCAAACAAAACAACTGATATTCCGCTGGCA
GCTTATTGTCGCATGATCAATAAATCCATCAACCAGACAATGGATGTTAA
CCAGGATGATGCTGGTGTTGAAAAACATCCATCTCCCATATCAAAAGGTT
TGCATATCAAGATTTTGATATAATGATATAATGATTCTCCTTGCAGAGGA
TGCTAGATTAGGAGTCGTCTCGTTATAACTGTCTTACACTATAATTTATA
CTGCCTGCTCTGGCTCACTTTGATATCATGGTATGTTCTCTAGAAGCAGA
ATCTGCGCACTTTTTGGTATTTACATGTCGACGAAACATAGATGGATTTA
ACAGGCTAGGTATATAAAAGGCTATATAATATTAGCAGTCATTGAAAGAG
TGGCTGACACGTTGtataaattaattttaaaaccaaaagaaATTGCTACT
GAGATTTTGAAATTAACCTGTCAAATTACTTTAATTAATAAATATTAGAC
TTCATTGACACAAAAATTCATACGCACCTAGTTTTAGGATTTTCAGCACG
CTTTAATTGATCTGAATATTCTACTTAATATTGTAGCTTCTGCAAAGACC
AACAACACTAcctttaacaataaaaagaatgaaagtattacaaagaaaaa
caatCAAAGTATTCTCAAGAGAAACAATAAGAAGAATATCAAGAAGTGCC
TAAAGATGGGGTTTTTTGAACTTGGACTGACGTTGCTTCNTCATagttat
ttctgattttttgcacagtaatgcaaaatggtgattcccaaaaagcgacg
gagcccgattttcgaaagaatttgggccaaaaagtgcctaaaaatggggt
tttttgAACTTGGACTGATGTTGCTTGTTTGATCAAAAATTTCTAGCAGC
TTCTATTCTGtctttacaagttttttttcgagGTTTTACATTGATTGCCT
GAAATTAAAtaatgaaagttttctttggGAACTTTAAACGTTTGAGACTG
ATGATGACCTGACATTTTTAGTTGAATTCGATAATCATCTATTGGATTTa
cagtgattttttaaatctttggtTGATTAAGAAAGCCTTTTAAAACTAAA
TTATGCGTacttttttctctctttcagaTAAAACCATTTTAAATTCGACC
AAAACTGTAAAGCACACTAAAAAACAGTCAACTACATCAACTGCTGATTT
AAATATCTCAAAATCAACAACGAAGTCTACTCAAAAACAACCAGAAACCA
ACCAAACCATCTCAGAAAATCAGTTGAACAATACTCGAAACACCTCCACC
AGGCTGACCAGATCCAGATTAAAATCGAACAAAAGTCTATCATTATCATC
TTTCTGTAATCAACTATCGACAACGCTTAACCTGACGGGTAAtatagaaa
atgttttcaacgTCACAGCATCGAGCGAGTCACAAACTAATAATACTATC
GATAAAAGCAACAAAACTTTCCCCGTCAATACCAATAGTAAATCAAAGAG
CAATCAACAAAATAATAAGACAGTTACTTTACCACAAAGCAATNAAAAAC
AATTCCTGATCAATCTCATATGAACTAAAATtgatgtattcatgatatgc
accactggagagtcttctgaaaactttaagaattttccacccaacacgtc
actttttctattgtttaaatgacgtattgggtggaaaattttaaaagttc
ttagaagactctccagtggcgCACATCATGAATACCGAGTTGAttgttct
acatctgcaatccTGAACTTTACCTAGCACATTTGACGTCAATTGATACT
TTGGTCATCAGTTGGTTTGAGAGACAGTTATATCTTCTTACTATACTAAt
tgagtttatgaaaattttttgtaacGATAGCCCAGCATTAAGAGCCATCT
CCGTCTATCACGGGCTTCACATAGCCGTAAGAGTATACGGATATAGGTAA
TCTATTAGCGTTTTGgggaagaagtcgttgcagtgtaaatctttcgcaaa
tttaaaaacccaacCCATGTTAGTTAGTTAAtgcgttcgttaccagcttt
tctcgagattggctcattagttttttcagatttttggcacaaaggtgcat
gaccctaaaccctcgaatgtgacggagcctgattttcgagaaaaaaattt
ttttgggcaaatttggaccaaaaaacggcttaaaaacgggttttttggac
tttgtgaaaaattggatcattaattttttctgatttttagcatgaaagta
gggtacaatcatagtcttcaaaatcaaaaaaaacctatatcacgtgatag
agctcttcaaactgagcaaaaaaatgtattatatcaaagtctcaactttt
ctaaatcaaaagttatgggcgtttttgtggtaaaaagtgctataattttg
cataaattatgcagattgtggggaaattctttaaatcaatttttgaccat
aaaatcgtctataatttttgatctaaaaaagttgagactttgatataata
catttttttttgctcagtttgaagagctctatcacgtgatataggttttt
tttgattttgaagaccccccaaaaatcacaaattttcagggcttacaatt
ttgcaaaaaaacgcaaaaaatcgcaaattacgcaaaaactgcggatattc
aagcttggtaacattcagatttggaatcagcaccctcaaattgagtaaGA
AACATGTGAAAAAGTTGGTCAcagacattttaaattttttctttattttt
gaaacaataacaatccaCTGGCCACGGCCTAAAAATGTCACGGTGGAGGG
TAATGATTTGAGTTTTCTAGAAACacttattatttttttggctgaaaaac
gaatctttatctataagaatcactaattataagcatagatcaatgttctt
agccaaattattattttgttattattctttctaaacaaagaaaatgtcac
cttagagcgcgatgatttgagttttctgtaaacacttattatttttttga
ctgaaaaacgaatctttatctataagaatcactatttataagtatagatc
aatgttcttagccaaattattattttattgccccgcaggggttttgttgc
ttcacgtagcggacttgctcgccagaaaaatattcatgttcagattcatg
ttgtttcttccgattctgagcgggccgccgcgtttaaaaaatgtttgcgC
GCACCTAATATTATATCTCTTTTGTTGCTACTTGGTACTTTATAAGATTG
AAGGtaatatacttttcggtaattagttcttagaaagtaaacaaaggatg
gcgaaaaaaattagcatacttatttttattataagcatctactttataag
aatcaaatcaataactcttgattgaaggcaatatatctttcggtaattag
ttattagaaagtaaacaaaggatggcgaaaaagataagcatatttatttt
tattataagcatctgctttataagaatcaaatcaataacctttgtttgat
tgaaggcaatatgcctttctgtaattaattcttacaaagtaaaaaaagta
tggtgaaaaagatgagcatatttatttgtattataagtgtctactttata
agaatcaaatcaatttcaaaatttttggcgttttcactgtgataacatgt
gagcgataacttctctttttgagatgtgagcgaccgtctatcgcatgtca
tctcaaaagtaaagttgaaaccaagctttccTCCTCcgacttaaatttta
tcgataagacgaatttaaaatctataCATGCGttattttgcttacttagg
gatatttcgaaAAAGGAAGCGctgcggggcattcttagccacagcatgaa
catataaacgacggacgtctatcttttattgtctctttgaagcgagcttc
gttgccgcctgtatttcaaagttggtatgaaaaatccgacaatattccgt
cataattttaattctttgaattatttaggtaaaaggattgatagagcttg
aacattactcctaatgtacaaaaaaattattttcgatttttttcacaagt
ttgcaatatattttatcaacatttaaaactctaaaatgcagaatttcaac
tgcgtgtatacttttgaatcacttttgtcactcacataattttttttatg
acttgaaaaaaatagcttgccaaagttgagcgcatgtttcataagaaaat
cgaaattagaatgtgacactctctaagattattagacacttttaagtcaa
aatttagaaatattagtcggatttttgacaagctgacgatNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtattgtttcatt
ttatgcttttaacgaggcggcaacgaagctagcagccttttctacaaaaa
gacaaaggagatggatgtccagtcgtttatatgttcatggccacagctac
ttgctagttattattttttctaaacaaagaaaatgtcactttagagcgcg
atggtttgggttttctgtaaacacttattatttctttggctgaaaaacga
atctttatctataagaatcactatttatctacataaaagattttttgttc
ctTGCCATGAAGCAGTGTTGTAAGGCTCTGATTGGTCCGTTTTACAGTTT
ATTAACAGATCATTTTTTTTACAATCCCAaaagggaattgaaaaaaatga
actatTGGTTCAAAACACGTTTTTATTACATtaagaaaaaatgtttacaG
TTTAAGATCTCCATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNgaaatgccagaaaaggggattcctttgctcaaaatggca
tttcaaatgccaacgaaatgccaacacgctggcatcattaggcatttgac
aaaccgaacaattgcccggaacaatagaattcaaaagaatactgcaagca
attacaaatgccaggctggtctaaacgcagcctaaGAGAGGATCGATGCG
ATCTCACAAAAAGGCAAGTTCACTTTTTAAATGcttatttggaaaatatg
gAGAAATGACGTGTGTACGCGATGAAGAGAACTTTCAGCAAGAAAGATTG
GGAAGGCGTTGAAGGAGCAAGTCCCAAGGCTAAACGGCTCAAGCTGACTC
CAAATGCAGCTGGCTTGTTTGTTTGTCCTGTTTCCAATTGTGACAGTGAT
AGCTACCACAGTCAAAGAGGTTGCAGAAAACACGTTGTAAGGAAACACGG
ATGgtacttttattttgaaagtaaacCTAATATTGATGAAGTTTTCACag
ataaaatctatttttcaaaaagagcagTAATCAGAAATAAAACTTGGAAC
ATTTCATCATTCTCGGACAAATGTCAACTGGCTAAGGACTTTATATTTTG
GATATGCAGTGCTANGTTTTCACAGATAAAATCTATTCTTCAAAAAGAGC
AGTAATCAGAAATAAAACTTGGAACATCTCATCTTTCTCGGACAAATGTC
AACTGGCTAAAGACTTTATATTTTGGATATGCAGTGCTGGAGGGGGTGGC
AAAGATGCAAATCAAGCGCTTCAAATTTGCCGAAAAATAATGAAGTTCTG
TAAATTttgtttggaaaatttggaagaaaattttgaattgacTTTGACTT
TAATGGAATATTGTGTTGGATCTACGGAATATATAGAGAGATTTTTGAGA
TATCTGGAGAATGAATGCAAACTTGGCAAACCCGGGATGATATCTTATCT
ACagtcagtgtagctggaacctcgatattccaggattagaaaaagctata
cctgttatcttttttcttcaaagaatcaacaagccatcaacatcaataaa
ttacacacattttcctcagaaacttttaaaattatctgccattatgactt
tcttgaagccgttctgaaattaaccaatcgggttaggtatcggaattccc
aTAGGAgatcttttccgagatttgtaaaaaagctaagtcggcaaaaaaac
tttttccgggggtttgaggaataaacagaactgttatcgtttgtttttta
tttaaccatatatttaaatttgcgctcaaaaatacttaaatgaataagtt
aataatattcaatatactatttgtatctctcaggaaataaacacttacag
aacgacattaTCATTTGTaatacccccgtgtttggaccattctatcgagg
gtgcaaaatagggcggaaactaagtagcaccctcagtgtaagattgccgc
ctcatctttattcgcccgcgcaaaaacgcgagctaatcatttttttctcg
cgtgCTCAAGGgcaaaaggaaagtgatcgatattctttgaaggaaaaacg
tcagagacaaacccaaagaccaaaagatgtattttgttattgagaatcga
tcctgtgaagatgaaaaactttctgctctgcgtttttttcggaacgctga
aaaactctaatttcgattttccttaaggtaaagaggttgtgagatttggg
ttagcaaggcaaaaatcgctaaaaaactggtaaaatcgtaatcctcaaaa
atcgaagttccagcatCACTGACAGTCATTGAGTCATTGCCTAGACTATT
TGGGATGCAGGGGTATTACGCGCAGACAAAATAGCGATATTTCTGACCAG
CGAAGTTTTTCTCTCTCGTGCCAAACAATGTTTGAGAAAGAAGATGCGGG
TCGAGTGGAACACTTTACTTTCAATCGAGCATTTGGAGAGTATCAATTGC
TGGGCGTCACTTGCAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTGCTGGGCGTCACTTGCAGATTTACAA
AAAGTGATACCTTTTCACGAGGACAGGTATAACCAagttgtaaatttatc
aaagatCAATGCTCACATTGCCCGCGATCTTTCTTTCGCGTCATCTTTCG
TagtttctttgttgtttttaaatGTTAAAGGCAGCAGGCCAATGACATTT
CAATTTCTTACTGTGAAAGTGGTTCTTACTGCTATGAAAACAGGAATGAT
TGATCAAACACAATTAAAAACTGAAGAACAATACGGTTTTGATTCACTTG
TTTTTACTGATGACGTACTttcgaaattgaaaaattacgtaGATCATGTT
AGACCACGATTGAATTCAAAATGTGATTTCTTACTGGTCTGTAAAAACGG
AAACCAGCTTAAAAACTTGGGAGATATATTTGGAAGAATGGTGTATCAAG
CGATTGGAAAGTATATAACACCAACGCGTTATAGGCATCATCGAAACCGC
TAGCGCTGAGAACGTGACCCTAGAAGAACAACGTATTGTCAGCCTCGACC
AGAAACACACATCAAATGTTGCCAAGGTGCACTATTAACAACGAAAGTCA
CAAGATGTTGCAAGAAAAGCGAACGACTGTATGgacaagttgataaaagt
tacaTCGGCCAAGGAGAAACATGTTAAAGAAGATAAAATCGTACAAACTA
TTGGTCACCTTCATTTGCTACAACATCTACAAGATATTCAACTCCTGCAA
CTTTGTCCAAAGATTTGCAAACCTGCAGGGTTTGTAGATTGAAATTTATT
GATTGCCTTCATAATTTCTTTTCTCCGCTGTAACGAACACCGACTCAAGG
ATAACTAAAAATTGCTCTGAAAGGTGAGTCCGCCCGCTGTGATAATAAAG
AGAATGGAAGTCACATGGTTTATCCTTGGTCAGtcatccttttttgacat
tGCTAACAAATAGCGGTTTTTAATATTAGTAAATTAAActaaagaataaa
aacaaatatggcagattttgtaaaaatttctgTAGCGTTCGTAGGGTTTG
AATGTCCCAAAGATTTGCACATTTCTTTTTGCtgagaaaaggttgaaatt
caGCTGCAACTCCTGTGATATCTGCAAACAAAGTAGCTCAATAGGTACTG
TGTTTGAATCTCCTTCAAACGCTGCAAACCCTTCAAATTTGAGACCAAAG
ATTTgcaaaaatgggttttttgcaGGGTTTGTAGTGACCAATAGTTTGTA
CCCTTTGTCAATCTCGAAATTTTCATATATTATGGGCATTGAATCTGAAC
TACTCTTCAGATTGACCTTGTATTTAGAATGTAGACTCACTGGAAGCATT
GAAATAGGTTGATAAAAAATAACACCAATAAACATCCAGGTTCAATTTTT
CGGTACAGGGCGATAAGCATTTTTGACCCCCTTTTTGACCGGGGCGATCT
TAGCCAAATTGAGGTTTAGTATTACAAGCAGGGAGTATAAAAAGCATTAg
aacaatttcaggcttaaaataaaaatagtagTCATAGCATCAAAAGATTT
TACTGgtctttatataaaaaaaactgtacccggtgaaaatttacctcaaa
ttttccaacccggcgacaTTATTCAGTCAAAAATCTGCCCCGGTGAAATC
CTGTTATTTTCTTAGCCACCCCGGTGAGCTTTTAAACTCTACcgggttac
tgagacaggggtgttgttacGAATAAAGGAAATtcgtcaaaacaaaacaa
atttattcATATACTgtatcaattttaaaaacacatATATTTTCTGTAAA
ATACGAAACTTTTCGTATGACAAAGTTACATTATAAAGTAGGTATATGTT
AACATGGCTTattgattgataaatttattcatcTTCATTGATAGTGAAGT
AAAGTAAAGGATGGATTCCTCTTTTTTAGATACTGAAGAATCCTTCACCA
CCTCACCAGTAGTGGTAAAACAAAAAACTGGTAAGGATGTAACAAGaaca
aagaaaagttttgaaggTAAGTAAGTTTAACTAGACAAGTGCTTTATCAG
TAAAGGCGACTATGAAAAATTACTCTAATCAAAAGTCCAACACCACTTTC
TTTTGCTGTCTTTGAACTTCTAACTATGNAATTCACTCAAATcagctcaa
aataaaaaaaaaatattcttgaaaattgaacataataAGTGTATAAAGAG
GTATTACATTACTCTCAGTTGGgtcgcaaaatttgtgtaggagaagAGAA
TTAGTAACGATTAAAAAATTACAGTCAGAATTTAAATCTGTTAAATTTAC
TCTTTCAGAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaa
agaatgtttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTA
ACAGGT

Coding sequence (CDS) from alignment at scaffold_110:38955..50960+

>TCONS_00046443 ID=TCONS_00046443|Name=TCONS_00046443|organism=Clytia hemisphaerica|type=CDS|length=6300bp|location=Sequence derived from alignment at scaffold_110:38955..50960+ (Clytia hemisphaerica)
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
ACAGAAACACTGTATTCAATTCCACCTGCAGAGAAACCCATCATAGAATC
TGGAAAACCCCAAATGGCAATCTGCATGTCTGTTGGAAATAGTACTTCAA
AAGAAATCCAAAAGTTCACCACACCGCAAAATCAGAAATCCTTTAATCTC
AGTCGAAACTCGTCTAAACTTCTACAAGTCTCAATCATGGAACCAGAAGA
ACATGAAAATACTGAAGAATCCTTCACCACCTCACCAGTAGTGGCAAAAC
AAAAAACTGGTCAGGATGTAACGAGaacaaagaaaagttttgaagAGATT
TCGATGCAAGTTGAGAATGAGAGCCCTTCCAAagaaaagaatgtttcagc
aaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGaatttaTTT
CAACTATTGGTCTCTCAAATGTCACacaagaaaatgttcaagaaaaacCA
GTTAAACAAAGCATGGAAACTCAAGCTGGTAGTGCAAAGGTGGTCAAGAA
AAGACGGTCTAGgctaaaaaataacaacaagGGACCCACTATACTGGAAG
AAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCGGTCAAACAAAACA
ACTGATATTCCGCTGGCAGCTTATTGTCGCATGATCAATAAATCCATCAA
CCAGACAATGGATGTTAACCAGGATGATGCTGGTGTTGAAAAACATCCAT
CTCCCATATCAAAAGATACTGAAGAATCCTTCACCACCTCACCAGTAGTG
GTAAAACAAAAAACTGGTAAGGATGTAACAAGaacaaagaaaagttttga
agAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAagaaaagaatg
tttcagcaaATGAACCAAGAAGTGCGACTCCAAAAAAGAATCTAACAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029641XLOC_029641Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046443-exon-scaffold_110-1491911889:38955..39059TCONS_00046443-exon-scaffold_110-1491911889:38955..39059Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:38955..39059TCONS_00046443-exon-scaffold_110-1510915933:38955..39059Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:38955..39059TCONS_00046443-exon-scaffold_110-1575043694:38955..39059Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:39416..39520TCONS_00046443-exon-scaffold_110-1491911889:39416..39520Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:39416..39520TCONS_00046443-exon-scaffold_110-1510915933:39416..39520Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:39416..39520TCONS_00046443-exon-scaffold_110-1575043694:39416..39520Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:39962..40048TCONS_00046443-exon-scaffold_110-1491911889:39962..40048Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:39962..40048TCONS_00046443-exon-scaffold_110-1510915933:39962..40048Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:39962..40048TCONS_00046443-exon-scaffold_110-1575043694:39962..40048Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:40225..40320TCONS_00046443-exon-scaffold_110-1491911889:40225..40320Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:40225..40320TCONS_00046443-exon-scaffold_110-1510915933:40225..40320Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:40225..40320TCONS_00046443-exon-scaffold_110-1575043694:40225..40320Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:40828..41151TCONS_00046443-exon-scaffold_110-1491911889:40828..41151Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:40828..41151TCONS_00046443-exon-scaffold_110-1510915933:40828..41151Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:40828..41151TCONS_00046443-exon-scaffold_110-1575043694:40828..41151Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:50484..50570TCONS_00046443-exon-scaffold_110-1491911889:50484..50570Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:50484..50570TCONS_00046443-exon-scaffold_110-1510915933:50484..50570Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:50484..50570TCONS_00046443-exon-scaffold_110-1575043694:50484..50570Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1491911889:50863..50960TCONS_00046443-exon-scaffold_110-1491911889:50863..50960Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1510915933:50863..50960TCONS_00046443-exon-scaffold_110-1510915933:50863..50960Clytia hemisphaericaexon
TCONS_00046443-exon-scaffold_110-1575043694:50863..50960TCONS_00046443-exon-scaffold_110-1575043694:50863..50960Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046443-proteinTCONS_00046443-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:38955..50960 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07177	0.645045	0.795332	0.579762	4.67631	2.62897	2.50037	3.39255	2.15126	2.0972	0.621637	2.39386	2.78791	2.80512	1.37754	1.41998	1.26101	0.913412	0.37998	0.617461	0.413564	1.35924	0.897485	1.22332	1.83431	2.663	0.724696	0.504607	0	0.48017
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046443 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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