TCONS_00046382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046382
Unique NameTCONS_00046382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046382 ID=TCONS_00046382|Name=TCONS_00046382|organism=Clytia hemisphaerica|type=transcript|length=3408bp
TGATGCCTCTAGTGGTaatggtgacgtcaccatcaATAAATACCTCGATG
GAGGTATCAATCGAGCCCAACTGACGCTACAAGAGCTTCAAAGTCTTGCG
GAGAGACAACGCGAACAGATCTTGTACAACAGTCAAGAACTTAtggaaaa
acaacaacaacttaTGAAAATGCACCACGATTATCGAGCAAAACTCAAAG
CACAACAAGAAAATAATCGCTCTGTCCCTAAAGGGTTGAAAGCACACGAA
AACCACACAACACATACTTCACTTCCACAATCACCCATGGCTCCCCATAG
AACCAACCGTTCCCGCCCCTCCAAAGGCGGTGTGGATCAAGACCAGTACG
CGAAAATGTTGAGGGCGACTTATCAGAATATGGGGCGGATACAGAGCAAG
AACCAAATGCAACATAATTTAGATGTCAAGAAGTTTAACAACACTGAACT
TACTCACGAGTTAGAGAAAGTACGTGCGGCTTTCGCTGCCAAACAAAACG
AACTAGCAGACGCGGTTAAGAAAGTAGACGTATTAACACACGAGCTAGAG
CAACGTAAGAACGGAGAAAACCATCCGTCCGTACCGACTCCCGAACGAAT
CAATCGACGCAAGAAGATTCAAAACGCCAAAGATGAATTGTATAGACTCC
AAAGTGAACTCATTATTCGAAACGAGATGAATTCTCAGCAAAGCCATCAG
CTTCAACTACAACGTGACATCATCCAGGAAAAGAAACAAGAACTCAAAAT
GCTCAACATCAGAATGGCCGAACTCGGTAACGCTTTACGCCGCCAACACG
GAAGTGGGTTTGACCCACGTCGCTCCATGTCCTACGGGAAACAATCGCCG
GGACTTTTTAACGGAACTTATTTACAAGACACTCTAAGTCGGCGCAAACT
CAACAACAATAACAGTAAACCGCCGCCAGGACAACGTGACGTCAACGCTA
ATATTGTTCCCAGTCCTTCGAAAGACCAACAACAAACGGAGCGTTCAGaa
gcgatgacgtcatcgccaTCTACGCAACATTTACGTAATGGAATGGTCAA
TGGCGGACATTCATCTAGCAGTAAATCGAAATCCAACTTTGAAGATGCTC
CAGTGTCCGGGGACCAGGTTTGGCGAACTGACCCGAAGAAGAGTTTGAAC
TTTGACAACCAACCACAACAGAAATCCTCTCCTCTCCATTCGCCTGCATC
CTCTATCTCATCTCTTTCTTCACTCTCCTCTGCTTCCGCTACTCCTGATG
AATCAGCACCCTCGAATAAACCAGCTTTCCCCTTTAAAGAGGCTCCACCG
GCGCCGCCAACCCGCACCACACCCGTAGGGGTCTTAATCGATCACAACGA
ACCATCAGAGGAAGACCTCTNCTGATGAATCAGCACTCTCAAATAAACCA
GCTTTCCCCTTTAAAGAGGCTCCACCGGCGCCGCCAACTCGCACCACACC
CGTAGGGGTCTTAATCGATCACAACGAACCATCACAGGAAGACCTCGCAA
AGTTACGcgcacaaaatcaaaaaatttacgAGCTTCAACAAGAACTTAAG
AAAAATACGAACCTTTCACTACAATCTTATAATGACTCTTCTCTTTCGTC
GTCCAAAGATGACATAAGGTTTCAACCGTACGGAGATGCCAGCAGTAGTT
GTTCTAAAGAAGAACTTTCTTCTACCGCTCAACTTAAATCTAAACCACCT
CCACCGACTACTAAACCCAAACCACCTGCGGTATCACCCAAACCAAGTAT
AGCAGCCAAACCGAAAATAAACACAACCAAACCGGAAGAGATCGAAAAAA
CGGAAGTACAAACAATAAGGGATGATACCATTCCCGACGAACGTCATGTA
AATGATCACGAAAATAATACTTCAAAAACGAATGACGCTAATTCGTGGTC
GGTGGCTCCGCCTCAAATTGTAAACGTTAATGAACCAGATGAGTTTGAGT
TATCTTTTGCAGATATTGATGAAATTAACGATATGCAAACGGACTTATGG
AGCAATAGCGGTTCATCCGCAGGATCGCAAAGCTCTTACGATTCCGAAAC
TGAATCTTATACGGCGGCTCCCGTCCCTGTTGTCATAAGCGTGTCGCCCG
ATAAAATGCCTCCTCCCATTTTAATGAAACCGGATAAACCGAGAAAACAG
AAACGGAATGTTATTTTGGATCCGTTTGCTCTTTTGTTGGATTCAGCTTT
GGAAGGAGAAATGGAGATGGTGAAACGAACACTTATGCAGGTGCCGGACC
CAAGTCGACCAAATCCCGAAGGAATCACAGCTCTCCACAACGCAGTATGT
GGAAACCATAAAGAAGTGGTGAGATATTTGGTGGAAGTGGCTTGTGATAT
CAATGCTGCCGACAATAACGGATGGACGCCCCTTCATTGCGCAGCTTTCT
ACAACGATACGGAGCTGTGTCGATATTTGGTGGAGAGCGGCGCTTCAGTG
TTTGCCACCACTTACACCGACTACCAAACACCCGCTCACAAATGTTCACG
CCTTGATGATCATTACGATGAGTGTTTCGCTTATTTACATGAATGTAAAG
AGAATGTTGGCCGCATCGACGCTGGTTTGGTGCACGCGTTATATGACTAT
GAAGGCCAGTACGAGGACGAGTTATCTTTCTATTGCGGTGATGAGTTAAC
TATCTTACGACGAGGTGACAACTCGGAGAAAGAGTGGTGGTGGGCTAGAG
ACTGCAAAGGAAACATGGGATACATACCGTGCAATCTTGTAGGGAATTAC
CACCGTATTTCTGCTGCTGTGTAATGGGGCCATGTTCAAAGAGAGAATGA
TCGAACGTGGTTGAATATGTCAATATAAAATTTCTAGTtggaaaaaacaa
aatgaaaatattcaaaataaatccACTATATAAGGACACACCTAAGTGAT
TGAAGTAGCGTCTTTGTTATGGGCCCTTTTCTCAATGCTTCTAAAGTGAA
AATACTTGCCAATTTCAACTTTTCCAATGatagaaaaatagaaagaatta
tcctcaaattttatttttgtacgattttattgttattattatcatttGTA
TTATTATCCCACCTAATATTTTagtattttgaaataaaaaaacctaaaat
tcATTTAAGCCAAAACTCCTCTTCCTTTTCACACTAACACCCACTTTCAT
TTATATAtaatgaaattcttttttcttgtaaattttagaatccaattttt
tttcttgtagaacttttttttgttttgacaatAAAATCAGAATCTTGTac
agttttttatattttatcagTTTTATTTTCTGAATAGATGTAGCGATAAG
GGAATGATATAAAAATCAAATACAGTTGTTACTGCTTTTCAACCTCGTCA
ATTAGAGTcttcattttgtcattttgttagaaacaaaaagacaagttgcg
attCGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_109:282934..291309+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046382 ID=TCONS_00046382|Name=TCONS_00046382|organism=Clytia hemisphaerica|type=transcript|length=8376bp|location=Sequence derived from alignment at scaffold_109:282934..291309+ (Clytia hemisphaerica)
TGATGCCTCTAGTGGTaatggtgacgtcaccatcaATAAATACCTCGATG
GAGTACGTGAATTCGATTGAATCTACTGCAGCTGTTTTTGACAGAATTTG
AATTGCTAAGAAAAACTTTTAATGCTATTCACATCCATTTCTATGACGAC
TTATAAATGACGAACTATAAATTGAGACTGCAACCTAAAGAAATTTAGTT
GATCCTAGCTTAATGATAAAAATGCTATGTACTTTATACTTAAAGACTAC
AACTTCAAACCCTAACAACGTATTATAAACTGTTCTACCAAACGCGATGA
CTTATTTTTGATTTCGTAAGACGGAAAGAGAAATTGACCTTTTATATAAA
AAGGGTGAAAATTCTCTTCACACTGAAAACCGCATTGACCGACCACTGTC
GAGACAGTCACACAATAaacttgttttgatattttttcttttttcctttg
aaTTGAATCTCTCTCGCACAAAATAGTctgtttgtttcaaaattttaaga
agaaatcTACCGTCTAATAaccttgtaaaaaaattcaccttttaaACCTT
CCTTTCTCTTCTTGCTAATTTCCAGGGTATCAATCGAGCCCAACTGACGC
TACAAGAGCTTCAAAGTCTTGCGGAGAGACAACGCGAACAGATCTTGTAC
AACAGTCAAGAACTTAtggaaaaacaacaacaacttaTGAAAATGCACCA
CGATTATCGAGCAAAACTCAAAGCACAACAAGAAAATAATCGCTCTGTCC
CTAAAGGGTTGAAAGTAAGTAGTGACTGAATATTCCCATAAACATTTATT
GACCATAGAACTTCAAAATCTCGGTAATACCATTATTGCAGGGGCTATAC
CCTCCACTGGAAATCTTATCAAAATGTTTAGTTCGACTGAGATATTTTTT
GCTGGTTTTCTAGTTATGTAACGTCATAAACAAAAAGCAAACTAAGGCTA
TTTCTCTTTTATCTTTTAGGCACACGAAAACCACACAACACATACTTCAC
TTCCACAATCACCCATGGCTCCCCATAGAACCAACCGTTCCCGCCCCTCC
AAAGGCGGTGTGGATCAAGACCAGTACGCGAAAATGTTGAGGGCGACTTA
TCAGAATATGGGGCGGATACAGAGCAAGAACCAAATGCAACATAATTTAG
ATGTCAAGAAGTTTAACAACACTGAACTTAGTAcgaacttcttttttttc
ataatcCCGAGATTGTATTATGGCCTTTCTTTTTCGGTAATTTCACAAca
acgtgttttttttttcacactttcacaatgctggacaaaaggttgtagac
acatgaaatttcagtgaaaaatgatgagaaatagNacaatgccggacaaa
aggttgtagacacatgaaatttcagtgaaaaatgatgagaaatagagcaa
aatgactcttcaatgtgtctgaaaggggatggaaattaagaaaaacactt
ttgaagccgTTGCATCGcctttgaattgcttttgagcgaaccacaagcaa
aaaatcagcgttttgatattggtgtaagccagttaatcaagcccttgtgg
tttgcccttgcggttagactgtgGGTgatgaaagactttgaaagactttg
gatGGGTTTGGATGGGCttggatgggtttggaaagcacccagaacttgtt
tttgatcgatattgaagtattttgcaaaccttttgtccagcattgcaTGT
TATCTTGTACTCGTTTTCCTGGAACATCACTCTCGACAGTCTAGACCATG
CAGAACATGCtcttaattttttcttccttatgTTACAGCTCACGAGTTAG
AGAAAGTACGTGCGGCTTTCGCTGCCAAACAAAACGAACTAGCAGACGCG
GTTAAGAAAGTAGACGTATTAACACACGAGCTAGAGCAACGTAAGAACGG
AGAAAACCATCCGTCCGTACCGACTCCCGAACGAATCAATCGACGCAAGA
AGATTCAAAACGCCAAAGATGAATTGTATAGACTCCAAAGTGAACTCATT
GTATGTCAAATGCTTTTCAATAATCCTTTCTCTTTTATACCTGTTACAGT
TCTCTACTACCTCCTGTAGTGATATTTCACGCATTAGATCGGGCatatac
cgggtgtcccagaaaaaagttccgctctttgaagtgaaNTGATCAAGTTG
acttaatttaataaatgacccctcaaaatttaagtttatccttcctcttt
ccaatgcaaaaagattcattatctaaaagttcatagaacttgagaaaatt
cacttcaaagagcggaacttttttctgggacacccggtatataTTAATTT
CTACGTAGGATACTGCACTCTTCTTCTCTTAGCTTTGTCTGGCCGTAGTT
TCTAACCCCTGTATTACGTACAATGTTTGTGTTGCATGTACAATGTTTGT
GTTGCATGACCCAATTAGCGAGAAAATAATCCCGCAAATTATCCTAGTTC
TAAAATCTAGATTCTTTACACCCTCATCCATTCCAGATTCGAAACGAGAT
GAATTCTCAGCAAAGCCATCAGCTTCAACTACAACGTGACATCATCCAGG
AAAAGAAACAAGAACTCAAAATGCTCAACATCAGAATGGCCGAACTCGGT
AACGCTTTACGCCGCCAACACGGAAGTGGGTTTGACCCACGTCGCTCCAT
GTCCTACGGGAAACAATCGCCGGGACTTTTTAACGGAACTTATTTACAAG
ACACTCTAAGTCGGCGCAAACTCAACAACAATAACAGTAAACCGCCGCCA
GGACAACGTGACGTCAACGCTAATATTGTTCCCAGTCCTTCGAAAGACCA
ACAACAAACGGAGCGTTCAGaagcgatgacgtcatcgccaTCTACGCAAC
ATTTACGTAACGGAATGGTCAATGGCGGACATTCATCTAGCAGTAAATCG
AAATCGAACTTTGAAGATGCTCCAGTGTCCGGGAACCAGGTTTGGCGAAC
TGACCCGAAGAAGAGTTTGAACTTTGACAACCAACCACAACAGAAATCCT
CTCCTCTCCATTCGCCTGCATCCTCTATCTCATCTCTTTCTTCACTCTCC
TCTGCTTCCGCTACTCCTGATGAATCAGCACCCTCGAATAAACCAGCTTT
CCCCTTTAAAGAGGCTCCACCGGCGCCGCCAACCCGCACCACACCCGTAG
GGGTCTTAATCGATCACAACGAACCATCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtga
aagactttgaaagactttggatggatttggatgggtttggatgggtttgg
aaagcacccagaacttgtttttgatcgatattgaagtattttgcaaacct
tttgtccagcatgtTATCTTGTACTCGTTTTCCTGGAACATCACTCTCGA
CAGTCTAGACCATGCAGAACATGCtcttaattttttcttccttatgTTAC
AGCTCACGAGTTAGAGAAAGTACGTGCGGCTTTCGCTGCCAAACAAAACG
AACTAGCAGACGCGGTTAAGAAAGTAGACGTATTAACACACGAGCTAGAG
CAACGTAAGAACGGAGAAAACCATCCGTCCGTACCGACTCCCGAACGAAT
CAATCGACGCAAGAAGATTCAAAACGCCAAAGATGAATTGTACAGACTCC
AAAGTGAACTCATTGTATGTCAAATGCTTTTCAATAATCCTTTCTCTTTT
ATACTTGTTACGGTTCTCTTCTACCTCCTGTAGTGATATTTCACGCATTA
GATCGGGCATATATATTAATTTCTACGTAGGATACTGCACTCTTCTTCTC
TTAGCTTTGTCTGGCCGTAGTTTCTAACCCCTGTATTACGTTCAATGTTT
GTGTTGCATGTACAATGTTTGTGTTGCATGACCCAATTAGCGAGAAAAAA
TCCCCCAAATTATCCTAGTTCTAAAATCTAGATTCTTTACACCCTTATCC
ATTCCAGATTCGAAACGAGATGAATTCTCAGCAAAGCCATCAGCTTCAAC
TACAACGTGACATCATCCAGGAAAAGAAACAAGAACTCAAAATGCTCAAC
ATCAGAATGGCCGAACTCGGTAACGCTTTACGCCGCCAACACGGAAGTGG
GTTTGACCCACGTCGCTCCATGTCCTACGGGAAACAATCGCCGGGACTTT
TTAACGGAACTTATTTACAAGACACTCTAAGTCGGCGCAAACTCAACAAC
AATAACAGTAAACCGCCGCCAGGACAACGTGACGTCAACGCTAATATTGT
TCCCAGTCCTTCGAAAGACCAACAACAAACGGAGCGTTCAGaagcgatga
cgtcatcgccaTCTACGCAACATTTACGTAATGGAATGGTCAATGGCGGA
CATTCATCTAGCAGTAAATCGAAATCCAACTTTGAAGATGCTCCAGTGTC
CGGGGACCAGGTTTGGCGAACTGACCCGAAGAAGAGTTTGAACTTTGACA
ACCAACCACAACAGAAATCCTCTCCTCTCCATTCGCCTGCATCCTCTATC
TCATCTCTTTCTTCACTCTCCTCTGCTTCCGCTACTCCTGATGAATCAGC
ACCCTCGAATAAACCAGCTTTCCCCTTTAAAGAGGCTCCACCGGCGCCGC
CAACCCGCACCACACCCGTAGGGGTCTTAATCGATCACAACGAACCATCA
GAGGAAGACCTCTNCTGATGAATCAGCACTCTCAAATAAACCAGCTTTCC
CCTTTAAAGAGGCTCCACCGGCGCCGCCAACTCGCACCACACCCGTAGGG
GTCTTAATCGATCACAACGAACCATCACAGGAAGACCTCGCAAAGTTACG
cgcacaaaatcaaaaaatttacgAGCTTCAACAAGAACTTAAGAAAAATA
CGAACCTTTCACTACAATCTTATAATGACTCTTCTCTTTCGTCGTCCAAA
GATGACATAAGGTTTCAACCGTACGGAGATGCCAGCAGTAGTTGTTCTAA
AGAAGAACTTTCTTCTACCGCTCAACTTAAATCTAAACCACCTCCACCGA
CTACTAAACCCAAACCACCTGCGGTATCACCCAAACCAAGTATAGCAGCC
AAACCGAAAATAAACACAACCAAACCGGAAGAGATCGAAAAAACGGAAGT
ACAAACAATAAGGGATGATACCATTCCCGACGAACGTCATGTAAATGATC
ACGAAAATAATACTTCAAAAACGAATGACGCTAATTCGTGGTCGGTGGCT
CCGCCTCAAATTGTAAACGTTAATGAACCAGATGAGTTTGAGTTATCTTT
TGCAGATATTGATGAAATTAACGATATGCAAACGGACTTATGGAGCAATA
GCGGTTCATCCGCAGGATCGCAAAGCTCTTACGATTCCGAAACTGAATCT
TATACGGCGGCTCCCGTCCCTGTTGTCATAAGCGTGTCGCCCGATAAAAT
GCCTCCTCCCATTTTAATGAAACCGGATAAACCGAGAAAACAGAAACGGA
ATGTTATTTTGGATCCGTTTGCTCTTTTGTTGGATTCAGCTTTGGAAGGA
GAAATGGAGATGGTGAAACGAACACTTATGCAGGTGAGGAAGAGGAGACA
ATCTTTATTGCTCCAATGTTTTCCTTAGGAGTTTTTTCACCAAGAACGGT
TTTACCTACATGAATTAAACGAAGTCTTGCTTACATTTGACTAGAATGTC
AGTATTATCAGCTCATGTTGAATTTTTAATTGGGACATGGGCCCCGTCAA
CTTGGTCAGTATCTTTCCTTTCCAGAATCCTCAGTTAGTCCTCACTGCGT
GCCTTAAATTGTCATTATGATGAAGGTTGTTTTGAATCAGCTTTCTGGTT
ACTAGCCTTACTATCAATGTAAACCTAACACGGGAGGAAATATTTAGACA
ATTTCTTTTTCTACACACATAGGTGCCGGACCCAAGTCGACCAAATCCCG
AAGGAATCACAGCTCTCCACAACGCAGTATGTGGAAACCATAAAGAAGTG
GTGAGATATTTGGTGGAAGTGGCTTGTGATATCAATGCTGCCGACAATAA
CGGATGGTGAGTCCAATCTCCTCTGTACCTAGTGATTTTCTGGTGTTCCA
AACAATCGTTTTCAATATTCTGGTCAGATTGCTTCGCATTTGACGTTAAA
TTCTCACACGGTTCCTCTAGTAAAATTagcatttttaggctgaaatgaaa
tataatttaaatcacttttctttgagattttttgacGCTTATATGGACCT
TTGAcagtaaaaaattgaaattcacgaattgaccgttgacttCTTATCTA
TTGGGTAGACCCCACAATTCCCATATTTTGATAAACATACTGAAATAATT
AGAGTAACCTAAAACtaggaaaattatgaaaatcctCTTTCTTAATCGCG
ACGTATGTATGGATCCTTTGCGGATCAGTACTTTAACCTTGTTCAAAGAA
TAACGTTccttcattcttttttcttaCCAGGACGCCCCTTCATTGCGCAG
CTTTCTACAACGATACGGAGCTGTGTCGATATTTGGTGGAGAGCGGCGCT
TCAGTGTTTGCCACCACTTACACCGACTACCAAACACCCGCTCACAAATG
TTCACGCCTTGATGATCATTACGATGAGTGTTTCGCTTATTTACATGGTA
AGTTTGAGAGAAAAACGttatcaaaactttttcatttcccTGTTTTCCAT
TCAAAGTAGTGAAAACTTGTACTTAGAATCCTTCGAAAGCGGAGGTTGAT
CAGGCGACGGGGTAGCAGAATATTGTAACTTTGTTAGTAGTATTTTTTTC
TGAAGCTCTAATAATGAAAAGTCTGTCAATGGCGAAAAAGCCATTTCAAG
TTTAACCAGAACACAACAATTTTATTACAAAGTTCTACTAAAATCGTTGC
AATTCAAAAGAGTCGTATATATTTTGTTGGCTCAGTGTTAGATCTTTCCC
TCAGTCAAATGGTcgctttttcataaatttctattCTTTCCATCATTAGA
ATGTAAAGAGAATGTTGGCCGCATCGACGCTGGTTTGGTGCACGCGTTAT
ATGACTATGAAGGCCAGTACGAGGACGAGTTATCTTTCTATTGCGGTGAT
GAGTTAACTATCTTACGACGAGGTGACAACTCGGAGAAAGAGTGGTGGTG
GGCTAGAGACTGCAAAGGAAACATGGGATACATACCGTGCAATCTTGTAG
GGGTAAGTGTTTTACGGGCTCTCTTAATGACTTGACATTTCATCTAATAA
TTGGAAAatgcagttgacgctctctagttCGATTTTCATCTAATAAGGGA
GCATATTTAATAGTATGGCGTTGTTTAAGAGAGTTTCTTGTTAATGGCGG
CTTTCACTTCAGTATTATCGAATAACAagacgtcgaattagagagcaacA
ACtgtattcaaaaaaatatttttaccccGGATCCCCAAGTTGAGGAGGTT
GAGTTTTCCACCATAGTAATGCTCCTCCAAAAGCCTGGAAATTCTAGGGA
AATCATcttaaagatgagaaaaaactaGATGTTTGCTTGCAACATGGGGT
AGTGAAGTCTATTTCTGGATTAGCATTTTCGAGGTTTGAGGATGTCTCGT
CAATCTCAAGTAATATGGTTCATATTGTTCTCTAATTAAGTTTATCTCTT
TTCCGTTCTTAGAATTACCACCGTATTTCTGCTGCTGTGTAATGGGGCCA
TGTTCAAAGAGAGAATGATCGAACGTGGTTGAATATGTCAATATAAAATT
TCTAGTtggaaaaaacaaaatgaaaatattcaaaataaatccACTATATA
AGGACACACCTAAGTGATTGAAGTAGCGTCTTTGTTATGGGCCCTTTTCT
CAATGCTTCTAAAGTGAAAATACTTGCCAATTTCAACTTTTCCAATGata
gaaaaatagaaagaattatcctcaaattttatttttgtacgattttattg
ttattattatcatttGTATTATTATCCCACCTAATATTTTagtattttga
aataaaaaaacctaaaattcATTTAAGCCAAAACTCCTCTTCCTTTTCAC
ACTAACACCCACTTTCATTTATATAtaatgaaattcttttttcttgtaaa
ttttagaatccaattttttttcttgtagaacttttttttgttttgacaat
AAAATCAGAATCTTGTacagttttttatattttatcagTTTTATTTTCTG
AATAGATGTAGCGATAAGGGAATGATATAAAAATCAAATACAGTTGTTAC
TGCTTTTCAACCTCGTCAATTAGAGTcttcattttgtcattttgttagaa
acaaaaagacaagttgcgattCGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029599XLOC_029599Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046382-exon-scaffold_109-1491911889:282934..282985TCONS_00046382-exon-scaffold_109-1491911889:282934..282985Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:282934..282985TCONS_00046382-exon-scaffold_109-1510915933:282934..282985Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:282934..282985TCONS_00046382-exon-scaffold_109-1575043694:282934..282985Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:283509..283697TCONS_00046382-exon-scaffold_109-1491911889:283509..283697Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:283509..283697TCONS_00046382-exon-scaffold_109-1510915933:283509..283697Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:283509..283697TCONS_00046382-exon-scaffold_109-1575043694:283509..283697Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:283903..284113TCONS_00046382-exon-scaffold_109-1491911889:283903..284113Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:283903..284113TCONS_00046382-exon-scaffold_109-1510915933:283903..284113Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:283903..284113TCONS_00046382-exon-scaffold_109-1575043694:283903..284113Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:284722..284933TCONS_00046382-exon-scaffold_109-1491911889:284722..284933Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:284722..284933TCONS_00046382-exon-scaffold_109-1510915933:284722..284933Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:284722..284933TCONS_00046382-exon-scaffold_109-1575043694:284722..284933Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:286991..288566TCONS_00046382-exon-scaffold_109-1491911889:286991..288566Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:286991..288566TCONS_00046382-exon-scaffold_109-1510915933:286991..288566Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:286991..288566TCONS_00046382-exon-scaffold_109-1575043694:286991..288566Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:288906..289039TCONS_00046382-exon-scaffold_109-1491911889:288906..289039Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:288906..289039TCONS_00046382-exon-scaffold_109-1510915933:288906..289039Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:288906..289039TCONS_00046382-exon-scaffold_109-1575043694:288906..289039Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:289464..289630TCONS_00046382-exon-scaffold_109-1491911889:289464..289630Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:289464..289630TCONS_00046382-exon-scaffold_109-1510915933:289464..289630Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:289464..289630TCONS_00046382-exon-scaffold_109-1575043694:289464..289630Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:289983..290185TCONS_00046382-exon-scaffold_109-1491911889:289983..290185Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:289983..290185TCONS_00046382-exon-scaffold_109-1510915933:289983..290185Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:289983..290185TCONS_00046382-exon-scaffold_109-1575043694:289983..290185Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1491911889:290646..291309TCONS_00046382-exon-scaffold_109-1491911889:290646..291309Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1510915933:290646..291309TCONS_00046382-exon-scaffold_109-1510915933:290646..291309Clytia hemisphaericaexon
TCONS_00046382-exon-scaffold_109-1575043694:290646..291309TCONS_00046382-exon-scaffold_109-1575043694:290646..291309Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:282934..291309 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0721069	0	9.28302e-10	2.59018e-10	0	0	0	0	3.83701e-05	0.00201306	0	5.75488e-07	0	0	0	0	0	0	0	0	8.21207e-05	0	1.21828e-08	1.22657e-09	7.60131e-06	1.8978e-09	0.000145591	1.3569	0.0210366
Blast
[Close]
BLAST of TCONS_00046382 vs. Swiss-Prot (Human)
Match: ASPP1 (Apoptosis-stimulating of p53 protein 1 OS=Homo sapiens GN=PPP1R13B PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 4.377e-64
Identity = 105/200 (52.50%), Postives = 145/200 (72.50%), Query Frame = 3 
Query: 2160 VILDPFALLLDSALEGEMEMVKRTLMQVPDPSRPNPEGITALHNAVCGNHKEVVRYLVEVACDINAADNNGWTPLHCAAFYNDTELCRYLVESGASVFATTYTDYQTPAHKCSRLDDHYDECFAYLHECKENVGRIDAGLVHALYDYEGQYEDELSFYCGDELTILRRGDNSEKEWWWARDCKGNMGYIPCNLVGNYHRI 2759
            V  +P ALLLD++LEGE ++V+R + +V DPS+PN EGIT LHNAVC  H  +V++L++   ++NAAD++GWTPLHCAA  N   LC+ LVESGA++FA+T +D +T A KC  +++ Y +C  +L+  +E +G ++ G+ +AL+DYE Q  DELSF+ GD LTILRR D SE EWWWAR      GY+P NL+G Y RI
Sbjct:  884 VRFNPLALLLDASLEGEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGWTPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCEEMEEGYIQCSQFLYGVQEKLGVMNKGVAYALWDYEAQNSDELSFHEGDALTILRRKDESETEWWWAR-LGDREGYVPKNLLGLYPRI 1082
The following BLAST results are available for this feature:
BLAST of TCONS_00046382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASPP14.377e-6452.50Apoptosis-stimulating of p53 protein 1 OS=Homo sap... [more]
back to top