TCONS_00046377 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046377
Unique NameTCONS_00046377
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3649

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046377 ID=TCONS_00046377|Name=TCONS_00046377|organism=Clytia hemisphaerica|type=transcript|length=3649bp
GAATTTATTCTAATATCTAACCATATAGAAAagcgaaagaaaaataattg
gcATATATTTATCACTGTTGGTCCGACATTCTTATCATTTCATTGGATTT
ATACGTTTTTGATTTACTTCACGTATAACATCATTGCTTGCTCATCGAAG
AAGAGAAGTGACGTTACTTTTTATGGTATCGGATTTAATGTAAATCTTTC
CTCGTGTTTTCTTGGTTTTGTTGGATATTTTGACGGAAAGTTTATGAGAA
AAACAACATGGTTTCACTGAAAGCACCTCCACCTGGCAAACCAGGTATCA
ATCGAGCCCAACTGACGCTACAAGAGCTTCAAAGTCTTGCGGAGAGACAA
CGCGAACAGATCTTGTACAACAGTCAAGAACTTAtggaaaaacaacaaca
acttaTGAAAATGCACCACGATTATCGAGCAAAACTCAAAGCACAACAAG
AAAATAATCGCTCTGTCCCTAAAGGGTTGAAAGCACACGAAAACCACACA
ACACATACTTCACTTCCACAATCACCCATGGCTCCCCATAGAACCAACCG
TTCCCGCCCCTCCAAAGGCGGTGTGGATCAAGACCAGTACGCGAAAATGT
TGAGGGCGACTTATCAGAATATGGGGCGGATACAGAGCAAGAACCAAATG
CAACATAATTTAGATGTCAAGAAGTTTAACAACACTGAACTTACTCACGA
GTTAGAGAAAGTACGTGCGGCTTTCGCTGCCAAACAAAACGAACTAGCAG
ACGCGGTTAAGAAAGTAGACGTATTAACACACGAGCTAGAGCAACGTAAG
AACGGAGAAAACCATCCGTCCGTACCGACTCCCGAACGAATCAATCGACG
CAAGAAGATTCAAAACGCCAAAGATGAATTGTACAGACTCCAAAGTGAAC
TCATTATTCGAAACGAGATGAATTCTCAGCAAAGCCATCAGCTTCAACTA
CAACGTGACATCATCCAGGAAAAGAAACAAGAACTCAAAATGCTCAACAT
CAGAATGGCCGAACTCGGTAACGCTTTACGCCGCCAACACGGAAGTGGGT
TTGACCCACGTCGCTCCATGTCCTACGGGAAACAATCGCCGGGACTTTTT
AACGGAACTTATTTACAAGACACTCTAAGTCGGCGCAAACTCAACAACAA
TAACAGTAAACCGCCGCCAGGACAACGTGACGTCAACGCTAATATTGTTC
CCAGTCCTTCGAAAGACCAACAACAAACGGAGCGTTCAGaagcgatgacg
tcatcgccaTCTACGCAACATTTACGTAATGGAATGGTCAATGGCGGACA
TTCATCTAGCAGTAAATCGAAATCCAACTTTGAAGATGCTCCAGTGTCCG
GGGACCAGGTTTGGCGAACTGACCCGAAGAAGAGTTTGAACTTTGACAAC
CAACCACAACAGAAATCCTCTCCTCTCCATTCGCCTGCATCCTCTATCTC
ATCTCTTTCTTCACTCTCCTCTGCTTCCGCTACTCCTGATGAATCAGCAC
CCTCGAATAAACCAGCTTTCCCCTTTAAAGAGGCTCCACCGGCGCCGCCA
ACCCGCACCACACCCGTAGGGGTCTTAATCGATCACAACGAACCATCAGA
GGAAGACCTCTNCTGATGAATCAGCACTCTCAAATAAACCAGCTTTCCCC
TTTAAAGAGGCTCCACCGGCGCCGCCAACTCGCACCACACCCGTAGGGGT
CTTAATCGATCACAACGAACCATCACAGGAAGACCTCGCAAAGTTACGcg
cacaaaatcaaaaaatttacgAGCTTCAACAAGAACTTAAGAAAAATACG
AACCTTTCACTACAATCTTATAATGACTCTTCTCTTTCGTCGTCCAAAGA
TGACATAAGGTTTCAACCGTACGGAGATGCCAGCAGTAGTTGTTCTAAAG
AAGAACTTTCTTCTACCGCTCAACTTAAATCTAAACCACCTCCACCGACT
ACTAAACCCAAACCACCTGCGGTATCACCCAAACCAAGTATAGCAGCCAA
ACCGAAAATAAACACAACCAAACCGGAAGAGATCGAAAAAACGGAAGTAC
AAACAATAAGGGATGATACCATTCCCGACGAACGTCATGTAAATGATCAC
GAAAATAATACTTCAAAAACGAATGACGCTAATTCGTGGTCGGTGGCTCC
GCCTCAAATTGTAAACGTTAATGAACCAGATGAGTTTGAGTTATCTTTTG
CAGATATTGATGAAATTAACGATATGCAAACGGACTTATGGAGCAATAGC
GGTTCATCCGCAGGATCGCAAAGCTCTTACGATTCCGAAACTGAATCTTA
TACGGCGGCTCCCGTCCCTGTTGTCATAAGCGTGTCGCCCGATAAAATGC
CTCCTCCCATTTTAATGAAACCGGATAAACCGAGAAAACAGAAACGGAAT
GTTATTTTGGATCCGTTTGCTCTTTTGTTGGATTCAGCTTTGGAAGGAGA
AATGGAGATGGTGAAACGAACACTTATGCAGGTGCCGGACCCAAGTCGAC
CAAATCCCGAAGGAATCACAGCTCTCCACAACGCAGTATGTGGAAACCAT
AAAGAAGTGGTGAGATATTTGGTGGAAGTGGCTTGTGATATCAATGCTGC
CGACAATAACGGATGGACGCCCCTTCATTGCGCAGCTTTCTACAACGATA
CGGAGCTGTGTCGATATTTGGTGGAGAGCGGCGCTTCAGTGTTTGCCACC
ACTTACACCGACTACCAAACACCCGCTCACAAATGTTCACGCCTTGATGA
TCATTACGATGAGTGTTTCGCTTATTTACATGAATGTAAAGAGAATGTTG
GCCGCATCGACGCTGGTTTGGTGCACGCGTTATATGACTATGAAGGCCAG
TACGAGGACGAGTTATCTTTCTATTGCGGTGATGAGTTAACTATCTTACG
ACGAGGTGACAACTCGGAGAAAGAGTGGTGGTGGGCTAGAGACTGCAAAG
GAAACATGGGATACATACCGTGCAATCTTGTAGGGAATTACCACCGTATT
TCTGCTGCTGTGTAATGGGGCCATGTTCAAAGAGAGAATGATCGAACGTG
GTTGAATATGTCAATATAAAATTTCTAGTtggaaaaaacaaaatgaaaat
attcaaaataaatccACTATATAAGGACACACCTAAGTGATTGAAGTAGC
GTCTTTGTTATGGGCCCTTTTCTCAATGCTTCTAAAGTGAAAATACTTGC
CAATTTCAACTTTTCCAATGatagaaaaatagaaagaattatcctcaaat
tttatttttgtacgattttattgttattattatcatttGTATTATTATCC
CACCTAATATTTTagtattttgaaataaaaaaacctaaaattcATTTAAG
CCAAAACTCCTCTTCCTTTTCACACTAACACCCACTTTCATTTATATAta
atgaaattcttttttcttgtaaattttagaatccaattttttttcttgta
gaacttttttttgttttgacaatAAAATCAGAATCTTGTacagtttttta
tattttatcagTTTTATTTTCTGAATAGATGTAGCGATAAGGGAATGATA
TAAAAATCAAATACAGTTGTTACTGCTTTTCAACCTCGTCAATTAGAGTc
ttcattttgtcattttgttagaaacaaaaagacaagttgcgattCGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_109:273007..291309+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046377 ID=TCONS_00046377|Name=TCONS_00046377|organism=Clytia hemisphaerica|type=transcript|length=18303bp|location=Sequence derived from alignment at scaffold_109:273007..291309+ (Clytia hemisphaerica)
GAATTTATTCTAATATCTAACCATATAGAAAagcgaaagaaaaataattg
gcATATATTTATCACTGTTGGTCCGACATTCTTATCATTTCATTGGATTT
ATACGTTTTTGATTTACTTCACGTATAACATCATTGCTTGCTCATCGAAG
AAGAGAAGTGACGTTACTTTTTATGGTATCGGATTTAATGTAAATCTTTC
CTCGTGTTTTCTTGGTTTTGTTGGATATTTTGACGGAAAGTTTATGAGAA
AAACAACATGGTTTCACTGAAAGCACCTCCACCTGGCAAACCAGTATGTA
TTTGTTGGCTTTCGTTTGATACTCCACTTATACATCTATCTatcaaccat
tgagtttaaacccgaagggctataGTGGGATCTTCAACCTTTCAAGATTT
GCGTTGAATTTAGAATGACTGATTTATTCTAGcgattttattgttttcac
gCGGCTGGAGATGGATTTTATCTGAAAACTGCGTGGTTACGCTTTCAAGA
TTTAGCTTTATTTCTCATGCAAGGGCACAATGTTATCAACTTTTTCGCCA
AAAGATGTTATATATAACAGGGGGTGTGGATTCGAGTTTACTAGGATCTG
ATATCATTGTATTGTTGCACTGACAGACACAGAAATTGACCTCGGTCGGC
TTTGGTAAGCTGGGGAGGGTTCAGGTTTTTAAACATGACTttagttgttg
tttttttgttttaattatgTTGGATGTGGACTGGAGCCAAAATGGTGTAA
AGAGTATTGTTCTTAACTACCTACACCTCACTCAACATGAGAAACTTCAT
TCATAAAACATCAACAGGCATACCACTCAGCCTCTTTCATTAGAAAAGTC
TGttgtttgtaaattaaaatttagCTGTGTCGTCAATTCTTTCTGGAAAT
TGTgatattacacgctttttttataagaatggtgtaaatccatttcatca
tggatattcttaacttttttgggaaaatcatcctaaaatattcttgcagc
attcttaggttaggatcctaattcagactagttttaacatacgtctcaag
cataaaatggcattttttgagCGAGTCTTACTTAGGGGTAATCaagggta
attgacaatttttatgattgaaaatgctctaaaaatggcattcttagctt
gaatagcaaatttcatgatggtaatattcttagcattattcttaattttt
tggccatttttatcatggacattcttataaagtgtattcttataaaaaag
cttgtaaatcatGTTAACATACCAAGCATCTCAGGCAGCAATGACTTACA
GTAATGTTTGTCATTAAACCCCTAGTGCTTGTAATCTATCGATGACCTTT
GAATTTTGTGGAACTTGTAATAAAACTATTTCAATTTCAAGTTCGTAAAC
CTTATTGGATTAATTCTCGAGCCTGCATTCCCCAAAAGTCAGTGTGCAAG
GAGAGACtttattatatatactttttcAACGTTGCCTAATTAGTTCGAGG
TATTACtattataaaatttataaacacACGATTGAGGAATGCTACCGAAA
TGGATACATGTTGCAATATCCATTGAGGACCACTTAATGATGTGTTGCTA
TTTGTGGTGAGGGAAAACGTGCATCCTAATGTTTACTTAAGAGTCCCTTT
AAATCCCTCAGTTATTTATAAGAAAGTATGGTTTTATTAGAACTCTGTCA
GACTCATTCAACTGTTTTTGTTGGATATAGGGTATTAATTGTCTGGTGGC
TTCATAACATCAAACACTAGCTAAACCTAAAAACTATTTTAAGATATGTT
AAAAGGTGAACCATCttaaaatgattcaatttttccccaaaaagaaTTCC
TTTTTTTGTCAGCTTTCCAAGTTTTTTTATGATGGACTGTGGTTTTCTGC
CATACTCAAAGTTATCNAAAAGAATTCCTTTTTTTGTCAGCTTTCCAAGT
TTTTTTATGATGGACTGTGGTTTTCTGTCATACTCAAAGTTATCGAAACG
GCCAGCCTGTTATTGAACAAAGATATTGGCAATAATTTGAAGTATCTATT
GTTTACCTTCTTAACGAGTTAATCGATGCTGAATTAAAAAAGATTACCTT
ATCTTATTGTTGagtgaatgaaaaaaaatgttatacAATTCATCCATAAT
CATTTTGTTATTCAGTCTTAACGTAGTTGTAGAGAGTAATTTACTACGTT
GGAAGCatgttatttttatgtttttagatttagaATTTTTTGGCCAAGAT
TCCAATGTTTTAATGGATATTCTCAGCTGTTCTAGGGTTTTACAGTTTAA
TTTCTGAATTCTAGATTCTGAATATTACAGTCattgatttttttcgaaat
caatCGAGCCATGCTGAATCCATTTATATAATGACGTGATGATAGCTTCA
TTTTCGTAGGAAGTTAAAAGGTtcaaaatgtcaattttcatgttttataa
tGTGGTGTGGTTGTGACATCTACGTAGGAACTTGTGAAATAAATGTTGAg
ttcttttccttttcctttctGTCAACCTCGTTGAATGGACGAGTTTCATC
AGTGTACAATAGTGTCGATAATTAGATAATGTACGTGGATAGCCTAGTAA
TGTAGGACTTTTGGACAGTCTCTCGATTGTTTTGACGTGGTCCACGACCA
GCTGGCTTAGCTAtttatgaactgaacggaacattggaaggagcgagGAC
TCGAACAGCGAAGCCCTGGTTTGTAGTGCTGATGTCTTTAACCACTTGAC
CATCACTTCTTAAGACGAGTCTACTTTACATCTGCTTTATTATCACAGTT
AAATCTGTGAACGATCTACTTCTTTAGAGAATTTGGAGGATTGAATTTGA
GATTATATTTTTTTGGAAGAGCGAAACACATTACACTAATCACCTTTTTG
GCATACCAGCCAGGTGTATTTCGTTTTCGAAACGAGTGTAATTAACTAAA
ACGTAATCACCTTCCAAGAATCTTGATGCTTTCaattagtttttttcatt
tccaaaaaCGTTTAATAAAGACTTTTTCAATCGGTAGTGGTAAGAGTGTT
GGCGAAAGTTGGCATCGAAAGAAAACCAATCAATTAATTGATGACGATGC
TATTAAACGCGTGCTTTCCTTTCGAATGAATCTGTCTTTTCgtgttttta
aacatttttatttgatgtAACTGGGAAAATTTATTGACATCAAACTCTTC
TTgtactctttttgtactactatTGGAGAATTCACTCTGTGTGACagtta
cagtggagtctctcgaacacgcacggggaacacaaatttgttcgagttaa
ggaaatttcgagtcatggagtaagttttaaaaagcattgCTAATTCAAGG
GACCAGCAAACTTGTTCTACTTGAAGAGACATTCGACtgagaggttcgaa
ttaaagataCTCCACTGTAGTTAAGGATTTCGACCTTCTTCTTTCTTCAT
TCTTTCTTCGCAAATAAATGTTTCTTCTTCAGGCCTTGATGTTGTCTTCA
ATGTGAGGAAGCACTATGATGGTGGCCGACGGTAAAAGAGAGacattttc
aattcaattgcTGTTCTTTACCATGTGTGAAAATGGATATCCTAGCTTTG
TTGAAAGGATGTTCACGTTGAGGCTGCTCTTTTACCAAAACTCTTTGCGA
CGGAGAGTATACCATCTCTTATTAGGAAATTTATTTCTGGTTACAAGCTT
TCCACTGTAGGACTCTTTAAAATCTCACCTCCATTGAGACACACCACGAC
GACATTTTGAATTGAGAATTTTTCATGAATAATGAATTATCCCACAACAC
GATTTTGTTTGAAAACTGACGGTAAATATGACTCGCCTATTCAGCAGACA
GGTTTGTCTCTCTATATTTAGATGGCTTCATCATTTTAAACGAAATCACA
TTGATTATTTAAGAATACTCTCTTCTGACcgttttactttcattttattc
atcCCCGTGTAGAATGCGGGGTCGTTTTATTATGGTTCGGGTTTTCCATG
ATTTCTATGTCTctgtttttgaatattttttggtgGCTTGAATATTTTGT
TTGTCTCTGTCTAGATTTGCCTTATGATGGTCATATTATCTCAGTTCGTT
CAAAATAAACAGTTATACACCTATTACGAGCACTGAACTCTATGCAGATG
GTTTCGATGTTCTTCTTTTCTCGagtgaaatttcatcattttttcaagac
tttCGTCTAATTTTACATATGTTATATTTTTATCCAGACTCAGAAAATCC
CCATCAAATCTTTTCACATTAATTCAAGTAACATGTCGATAAAAAGGGCA
AAAGGGGTGATGTTCTTACGCTTGGAATCAGTTGTTTGGCAACTTCACGT
GAATACCTTTTGACAGATTGTTTTGATAAAGGATTTAGGGGTCATTTTTG
TAGCAGTCCTTACTATACACGAAATGTTTTCTTTGCAAAGAGTTTTTTGA
AGCACTTCTCAAAGTCCAGTGTTAGTTTAAAGctttaaagtttattttta
catcaaatatTTTGAGAAGACGTGAATTATAAGAACNNNNNNNNNNNNNN
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NNNNNNNNNNNNNTACTAAACACGAAATGTTTTCTTTGCAAAGAGTTTTT
TGAAGCACTTCTCAAAGTCCAGTGTTAGTTTAAAGctttaaagtttattt
ttacatcaaatatTTTGAGAAGACGTGAATTATAAGAACCAGAACCACTG
GCTATTTTGGAAAGTAATTGCTAGAATCAGTTGTCAAAATGCCTTTTGCT
TGACTTTGTTAAATTGGGATCTTGGAAATATAGTGCTAGACAGTGTACTA
GAATCTGTCATCGCATCAATTCTGGAGTCTTCTTTTCCATCGTCAACAAC
TTTTTTACAAcaaaatttttacagtttttcaaatgtttgtaCAACCCTTC
ATCCTCTCTCTCTTTTTCCCTTTCTCTCTCTACACGTTGCAATAAATTTA
TGTTTGTTATCTTTTCTCTGCTCAGATTGTGTGCGGTAAAGATATTTCGT
AATATTGTCATTTTAAATCGTAACCGCATCGGGTTGTTGTGCTAGTTGGT
TAGAGGGTTGATTTCGGAAAGACGTATACACAATTCTTCTTTATGAAAAT
GCAAAGTTAAAGCGAAACTTGTCATTCCAACTTTCGCATCCTATGTACTG
TACATATTCTCAAATTGATGGAATAGGAATCTTATTAGTCATTTTGTTTA
GAGTCTTCATGTTACATTACACCAAACTTGATCACGTGTTTTACAGTAAT
ATGATCCATATATCATTCTTTATGAGGCAACTTTGCTGTAGTTAAAAAGC
GATCATTTTACGCAAACGAGTGCTACTTTATTGCAAAAGTCATGATGATA
TTACTCATANTTCTCAAAGTCCAGTGTTAGTTTAAAGctttaaagtttat
ttttacatcaaatatTTTGAGAAGACGTGAATTATAAGAACCAGAACCAC
TGGCTATTTTGGAAAGTAATTGCTAGAATCAGTTGTCAAAATGCCTTTTG
CTTGACTTTGTTAAATTGGGATCTTGGAAATATAGTGCTAGACAGTGTAC
TAGAATCTGTCATCGCATCAATTCTGGAGTCTTCTTTTCCATCGTCAACA
ACTTTTTTACAAcaaaatttttacagtttttcaaatgtttgtaCAACCCT
TCATCCTCTCTCTCTTTTTCCCTTTCTCTCTCTACACGTTGCAATAAATT
TATGTTTGTTATCTTTTCTCTGCTCAGTTTGTGTGCGGTAAAGATATTTC
GTAATATTGTCATTTTAAATCGTAACCGCATCGGGTTGTTGCGCTAGTTG
GTTAGAGGGTTGATTTCGGAAAGACGTATACACAATTCTTCTTTATGAAA
ATGCAAAGTTAAAGCGAAACTTTCAAACTTGTCATTCCAACTTTCGCATC
CTATGTACTGTACATATTCTCAAATTGATGGAATAGGAATCTTATTAGTC
ATTTTGTTTAGAGTCTTCATGTTACATTACACCAAACTTGATCACGTGTT
TTACAGTAATATGATCCATATATCATTGTTTATGAGGCAACTTTGTCGTA
GTTAAAAAGCGATCATTTTACGCAAACGAGTGCTACTTATTGCAAAAGTC
ATGATGATATTACTCATGAGAATGCTTTTAACGAGTTATCAAAATGATAG
TTGTGTATTTTCTGTAATATACAAGAAGAGTGTTTTATGCGATATGTCTT
TTTCAACAATGTCAGTAAATTGTGGTGATAGGGTGTTCCATacaataccg
taagttggtctaatttcgacacccttcctTAGAGATagaaataataggaa
ggttggtatcactgatagacaaaagattttttccgcTCTGAACGTTAAAC
AAAGAtaattagtttcaatcagcgattcggACTTTCCTAATATTCCTATT
Ttcaaagaaggatgtcgaaattagaagagggatgtcgacatcagaccaac
ttacggtactagATACTTCGGTATCTatctaaaatttctttcaaaatgtt
tgtttattaatctctaaagAACTTCAATAACATCAATAATCTGTGAACTA
AAGAACTTAACAGAAACCTTGTTTTATGTTTAACCGTGATGGTTTGTTAA
ACTTTTGCCCGTCTGAATTTGTGTGTATGATCATTGGATCAGTATccttt
gcttactcgtcaattttaatttacaagctttttcactttGGTTttacacg
gatgtggagcaagattagtcagaaagaggaaaagacaaacatttttttgc
ttatatctgcacaatataacaataggaagacactgtcttgatatgaaacg
ggaacatttatgtaaaaataaaacctttaaatctcTACTATATCTGTTAT
CGCCAGTAAAACAACCAGCAAAAAAATAGTAATAAGAAAAAATGATTGGG
TTCGTCCAGATGAATGGTTTGGACAAACGGAAGAAATTTCCACATCAGca
tcaaaaagtgaagaaaattcCCTCTCCTGATGCCTCTAGTGGTaatggtg
acgtcaccatcaATAAATACCTCGATGGAGTACGTGAATTCGATTGAATC
TACTGCAGCTGTTTTTGACAGAATTTGAATTGCTAAGAAAAACTTTTAAT
GCTATTCACATCCATTTCTATGACGACTTATAAATGACGAACTATAAATT
GAGACTGCAACCTAAAGAAATTTAGTTGATCCTAGCTTAATGATAAAAAT
GCTATGTACTTTATACTTAAAGACTACAACTTCAAACCCTAACAACGTAT
TATAAACTGTTCTACCAAACGCGATGACTTATTTTTGATTTCGTAAGACG
GAAAGAGAAATTGACCTTTTATATAAAAAGGGTGAAAATTCTCTTCACAC
TGAAAACCGCATTGACCGACCACTGTCGAGACAGTCACACAATAaacttg
ttttgatattttttcttttttcctttgaaTTGAATCTCTCTCGCACAAAA
TAGTctgtttgtttcaaaattttaagaagaaatcTACCGTCTAATAacct
tgtaaaaaaattcaccttttaaACCTTCCTTTCTCTTCTTGCTAATTTCC
AGGGTATCAATCGAGCCCAACTGACGCTACAAGAGCTTCAAAGTCTTGCG
GAGAGACAACGCGAACAGATCTTGTACAACAGTCAAGAACTTAtggaaaa
acaacaacaacttaTGAAAATGCACCACGATTATCGAGCAAAACTCAAAG
CACAACAAGAAAATAATCGCTCTGTCCCTAAAGGGTTGAAAGTAAGTAGT
GACTGAATATTCCCATAAACATTTATTGACCATAGAACTTCAAAATCTCG
GTAATACCATTATTGCAGGGGCTATACCCTCCACTGGAAATCTTATCAAA
ATGTTTAGTTCGACTGAGATATTTTTTGCTGGTTTTCTAGTTATGTAACG
TCATAAACAAAAAGCAAACTAAGGCTATTTCTCTTTTATCTTTTAGGCAC
ACGAAAACCACACAACACATACTTCACTTCCACAATCACCCATGGCTCCC
CATAGAACCAACCGTTCCCGCCCCTCCAAAGGCGGTGTGGATCAAGACCA
GTACGCGAAAATGTTGAGGGCGACTTATCAGAATATGGGGCGGATACAGA
GCAAGAACCAAATGCAACATAATTTAGATGTCAAGAAGTTTAACAACACT
GAACTTAGTAcgaacttcttttttttcataatcCCGAGATTGTATTATGG
CCTTTCTTTTTCGGTAATTTCACAAcaacgtgttttttttttcacacttt
cacaatgctggacaaaaggttgtagacacatgaaatttcagtgaaaaatg
atgagaaatagNacaatgccggacaaaaggttgtagacacatgaaatttc
agtgaaaaatgatgagaaatagagcaaaatgactcttcaatgtgtctgaa
aggggatggaaattaagaaaaacacttttgaagccgTTGCATCGcctttg
aattgcttttgagcgaaccacaagcaaaaaatcagcgttttgatattggt
gtaagccagttaatcaagcccttgtggtttgcccttgcggttagactgtg
GGTgatgaaagactttgaaagactttggatGGGTTTGGATGGGCttggat
gggtttggaaagcacccagaacttgtttttgatcgatattgaagtatttt
gcaaaccttttgtccagcattgcaTGTTATCTTGTACTCGTTTTCCTGGA
ACATCACTCTCGACAGTCTAGACCATGCAGAACATGCtcttaattttttc
ttccttatgTTACAGCTCACGAGTTAGAGAAAGTACGTGCGGCTTTCGCT
GCCAAACAAAACGAACTAGCAGACGCGGTTAAGAAAGTAGACGTATTAAC
ACACGAGCTAGAGCAACGTAAGAACGGAGAAAACCATCCGTCCGTACCGA
CTCCCGAACGAATCAATCGACGCAAGAAGATTCAAAACGCCAAAGATGAA
TTGTATAGACTCCAAAGTGAACTCATTGTATGTCAAATGCTTTTCAATAA
TCCTTTCTCTTTTATACCTGTTACAGTTCTCTACTACCTCCTGTAGTGAT
ATTTCACGCATTAGATCGGGCatataccgggtgtcccagaaaaaagttcc
gctctttgaagtgaaNTGATCAAGTTGacttaatttaataaatgacccct
caaaatttaagtttatccttcctctttccaatgcaaaaagattcattatc
taaaagttcatagaacttgagaaaattcacttcaaagagcggaacttttt
tctgggacacccggtatataTTAATTTCTACGTAGGATACTGCACTCTTC
TTCTCTTAGCTTTGTCTGGCCGTAGTTTCTAACCCCTGTATTACGTACAA
TGTTTGTGTTGCATGTACAATGTTTGTGTTGCATGACCCAATTAGCGAGA
AAATAATCCCGCAAATTATCCTAGTTCTAAAATCTAGATTCTTTACACCC
TCATCCATTCCAGATTCGAAACGAGATGAATTCTCAGCAAAGCCATCAGC
TTCAACTACAACGTGACATCATCCAGGAAAAGAAACAAGAACTCAAAATG
CTCAACATCAGAATGGCCGAACTCGGTAACGCTTTACGCCGCCAACACGG
AAGTGGGTTTGACCCACGTCGCTCCATGTCCTACGGGAAACAATCGCCGG
GACTTTTTAACGGAACTTATTTACAAGACACTCTAAGTCGGCGCAAACTC
AACAACAATAACAGTAAACCGCCGCCAGGACAACGTGACGTCAACGCTAA
TATTGTTCCCAGTCCTTCGAAAGACCAACAACAAACGGAGCGTTCAGaag
cgatgacgtcatcgccaTCTACGCAACATTTACGTAACGGAATGGTCAAT
GGCGGACATTCATCTAGCAGTAAATCGAAATCGAACTTTGAAGATGCTCC
AGTGTCCGGGAACCAGGTTTGGCGAACTGACCCGAAGAAGAGTTTGAACT
TTGACAACCAACCACAACAGAAATCCTCTCCTCTCCATTCGCCTGCATCC
TCTATCTCATCTCTTTCTTCACTCTCCTCTGCTTCCGCTACTCCTGATGA
ATCAGCACCCTCGAATAAACCAGCTTTCCCCTTTAAAGAGGCTCCACCGG
CGCCGCCAACCCGCACCACACCCGTAGGGGTCTTAATCGATCACAACGAA
CCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtgaaagactttgaaagactttggatg
gatttggatgggtttggatgggtttggaaagcacccagaacttgtttttg
atcgatattgaagtattttgcaaaccttttgtccagcatgtTATCTTGTA
CTCGTTTTCCTGGAACATCACTCTCGACAGTCTAGACCATGCAGAACATG
CtcttaattttttcttccttatgTTACAGCTCACGAGTTAGAGAAAGTAC
GTGCGGCTTTCGCTGCCAAACAAAACGAACTAGCAGACGCGGTTAAGAAA
GTAGACGTATTAACACACGAGCTAGAGCAACGTAAGAACGGAGAAAACCA
TCCGTCCGTACCGACTCCCGAACGAATCAATCGACGCAAGAAGATTCAAA
ACGCCAAAGATGAATTGTACAGACTCCAAAGTGAACTCATTGTATGTCAA
ATGCTTTTCAATAATCCTTTCTCTTTTATACTTGTTACGGTTCTCTTCTA
CCTCCTGTAGTGATATTTCACGCATTAGATCGGGCATATATATTAATTTC
TACGTAGGATACTGCACTCTTCTTCTCTTAGCTTTGTCTGGCCGTAGTTT
CTAACCCCTGTATTACGTTCAATGTTTGTGTTGCATGTACAATGTTTGTG
TTGCATGACCCAATTAGCGAGAAAAAATCCCCCAAATTATCCTAGTTCTA
AAATCTAGATTCTTTACACCCTTATCCATTCCAGATTCGAAACGAGATGA
ATTCTCAGCAAAGCCATCAGCTTCAACTACAACGTGACATCATCCAGGAA
AAGAAACAAGAACTCAAAATGCTCAACATCAGAATGGCCGAACTCGGTAA
CGCTTTACGCCGCCAACACGGAAGTGGGTTTGACCCACGTCGCTCCATGT
CCTACGGGAAACAATCGCCGGGACTTTTTAACGGAACTTATTTACAAGAC
ACTCTAAGTCGGCGCAAACTCAACAACAATAACAGTAAACCGCCGCCAGG
ACAACGTGACGTCAACGCTAATATTGTTCCCAGTCCTTCGAAAGACCAAC
AACAAACGGAGCGTTCAGaagcgatgacgtcatcgccaTCTACGCAACAT
TTACGTAATGGAATGGTCAATGGCGGACATTCATCTAGCAGTAAATCGAA
ATCCAACTTTGAAGATGCTCCAGTGTCCGGGGACCAGGTTTGGCGAACTG
ACCCGAAGAAGAGTTTGAACTTTGACAACCAACCACAACAGAAATCCTCT
CCTCTCCATTCGCCTGCATCCTCTATCTCATCTCTTTCTTCACTCTCCTC
TGCTTCCGCTACTCCTGATGAATCAGCACCCTCGAATAAACCAGCTTTCC
CCTTTAAAGAGGCTCCACCGGCGCCGCCAACCCGCACCACACCCGTAGGG
GTCTTAATCGATCACAACGAACCATCAGAGGAAGACCTCTNCTGATGAAT
CAGCACTCTCAAATAAACCAGCTTTCCCCTTTAAAGAGGCTCCACCGGCG
CCGCCAACTCGCACCACACCCGTAGGGGTCTTAATCGATCACAACGAACC
ATCACAGGAAGACCTCGCAAAGTTACGcgcacaaaatcaaaaaatttacg
AGCTTCAACAAGAACTTAAGAAAAATACGAACCTTTCACTACAATCTTAT
AATGACTCTTCTCTTTCGTCGTCCAAAGATGACATAAGGTTTCAACCGTA
CGGAGATGCCAGCAGTAGTTGTTCTAAAGAAGAACTTTCTTCTACCGCTC
AACTTAAATCTAAACCACCTCCACCGACTACTAAACCCAAACCACCTGCG
GTATCACCCAAACCAAGTATAGCAGCCAAACCGAAAATAAACACAACCAA
ACCGGAAGAGATCGAAAAAACGGAAGTACAAACAATAAGGGATGATACCA
TTCCCGACGAACGTCATGTAAATGATCACGAAAATAATACTTCAAAAACG
AATGACGCTAATTCGTGGTCGGTGGCTCCGCCTCAAATTGTAAACGTTAA
TGAACCAGATGAGTTTGAGTTATCTTTTGCAGATATTGATGAAATTAACG
ATATGCAAACGGACTTATGGAGCAATAGCGGTTCATCCGCAGGATCGCAA
AGCTCTTACGATTCCGAAACTGAATCTTATACGGCGGCTCCCGTCCCTGT
TGTCATAAGCGTGTCGCCCGATAAAATGCCTCCTCCCATTTTAATGAAAC
CGGATAAACCGAGAAAACAGAAACGGAATGTTATTTTGGATCCGTTTGCT
CTTTTGTTGGATTCAGCTTTGGAAGGAGAAATGGAGATGGTGAAACGAAC
ACTTATGCAGGTGAGGAAGAGGAGACAATCTTTATTGCTCCAATGTTTTC
CTTAGGAGTTTTTTCACCAAGAACGGTTTTACCTACATGAATTAAACGAA
GTCTTGCTTACATTTGACTAGAATGTCAGTATTATCAGCTCATGTTGAAT
TTTTAATTGGGACATGGGCCCCGTCAACTTGGTCAGTATCTTTCCTTTCC
AGAATCCTCAGTTAGTCCTCACTGCGTGCCTTAAATTGTCATTATGATGA
AGGTTGTTTTGAATCAGCTTTCTGGTTACTAGCCTTACTATCAATGTAAA
CCTAACACGGGAGGAAATATTTAGACAATTTCTTTTTCTACACACATAGG
TGCCGGACCCAAGTCGACCAAATCCCGAAGGAATCACAGCTCTCCACAAC
GCAGTATGTGGAAACCATAAAGAAGTGGTGAGATATTTGGTGGAAGTGGC
TTGTGATATCAATGCTGCCGACAATAACGGATGGTGAGTCCAATCTCCTC
TGTACCTAGTGATTTTCTGGTGTTCCAAACAATCGTTTTCAATATTCTGG
TCAGATTGCTTCGCATTTGACGTTAAATTCTCACACGGTTCCTCTAGTAA
AATTagcatttttaggctgaaatgaaatataatttaaatcacttttcttt
gagattttttgacGCTTATATGGACCTTTGAcagtaaaaaattgaaattc
acgaattgaccgttgacttCTTATCTATTGGGTAGACCCCACAATTCCCA
TATTTTGATAAACATACTGAAATAATTAGAGTAACCTAAAACtaggaaaa
ttatgaaaatcctCTTTCTTAATCGCGACGTATGTATGGATCCTTTGCGG
ATCAGTACTTTAACCTTGTTCAAAGAATAACGTTccttcattcttttttc
ttaCCAGGACGCCCCTTCATTGCGCAGCTTTCTACAACGATACGGAGCTG
TGTCGATATTTGGTGGAGAGCGGCGCTTCAGTGTTTGCCACCACTTACAC
CGACTACCAAACACCCGCTCACAAATGTTCACGCCTTGATGATCATTACG
ATGAGTGTTTCGCTTATTTACATGGTAAGTTTGAGAGAAAAACGttatca
aaactttttcatttcccTGTTTTCCATTCAAAGTAGTGAAAACTTGTACT
TAGAATCCTTCGAAAGCGGAGGTTGATCAGGCGACGGGGTAGCAGAATAT
TGTAACTTTGTTAGTAGTATTTTTTTCTGAAGCTCTAATAATGAAAAGTC
TGTCAATGGCGAAAAAGCCATTTCAAGTTTAACCAGAACACAACAATTTT
ATTACAAAGTTCTACTAAAATCGTTGCAATTCAAAAGAGTCGTATATATT
TTGTTGGCTCAGTGTTAGATCTTTCCCTCAGTCAAATGGTcgctttttca
taaatttctattCTTTCCATCATTAGAATGTAAAGAGAATGTTGGCCGCA
TCGACGCTGGTTTGGTGCACGCGTTATATGACTATGAAGGCCAGTACGAG
GACGAGTTATCTTTCTATTGCGGTGATGAGTTAACTATCTTACGACGAGG
TGACAACTCGGAGAAAGAGTGGTGGTGGGCTAGAGACTGCAAAGGAAACA
TGGGATACATACCGTGCAATCTTGTAGGGGTAAGTGTTTTACGGGCTCTC
TTAATGACTTGACATTTCATCTAATAATTGGAAAatgcagttgacgctct
ctagttCGATTTTCATCTAATAAGGGAGCATATTTAATAGTATGGCGTTG
TTTAAGAGAGTTTCTTGTTAATGGCGGCTTTCACTTCAGTATTATCGAAT
AACAagacgtcgaattagagagcaacAACtgtattcaaaaaaatattttt
accccGGATCCCCAAGTTGAGGAGGTTGAGTTTTCCACCATAGTAATGCT
CCTCCAAAAGCCTGGAAATTCTAGGGAAATCATcttaaagatgagaaaaa
actaGATGTTTGCTTGCAACATGGGGTAGTGAAGTCTATTTCTGGATTAG
CATTTTCGAGGTTTGAGGATGTCTCGTCAATCTCAAGTAATATGGTTCAT
ATTGTTCTCTAATTAAGTTTATCTCTTTTCCGTTCTTAGAATTACCACCG
TATTTCTGCTGCTGTGTAATGGGGCCATGTTCAAAGAGAGAATGATCGAA
CGTGGTTGAATATGTCAATATAAAATTTCTAGTtggaaaaaacaaaatga
aaatattcaaaataaatccACTATATAAGGACACACCTAAGTGATTGAAG
TAGCGTCTTTGTTATGGGCCCTTTTCTCAATGCTTCTAAAGTGAAAATAC
TTGCCAATTTCAACTTTTCCAATGatagaaaaatagaaagaattatcctc
aaattttatttttgtacgattttattgttattattatcatttGTATTATT
ATCCCACCTAATATTTTagtattttgaaataaaaaaacctaaaattcATT
TAAGCCAAAACTCCTCTTCCTTTTCACACTAACACCCACTTTCATTTATA
TAtaatgaaattcttttttcttgtaaattttagaatccaattttttttct
tgtagaacttttttttgttttgacaatAAAATCAGAATCTTGTacagttt
tttatattttatcagTTTTATTTTCTGAATAGATGTAGCGATAAGGGAAT
GATATAAAAATCAAATACAGTTGTTACTGCTTTTCAACCTCGTCAATTAG
AGTcttcattttgtcattttgttagaaacaaaaagacaagttgcgattCG
CAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029599XLOC_029599Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046377-exon-scaffold_109-1491911889:273007..273299TCONS_00046377-exon-scaffold_109-1491911889:273007..273299Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:273007..273299TCONS_00046377-exon-scaffold_109-1510915933:273007..273299Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:273007..273299TCONS_00046377-exon-scaffold_109-1575043694:273007..273299Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:283509..283697TCONS_00046377-exon-scaffold_109-1491911889:283509..283697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:283509..283697TCONS_00046377-exon-scaffold_109-1510915933:283509..283697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:283509..283697TCONS_00046377-exon-scaffold_109-1575043694:283509..283697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:283903..284113TCONS_00046377-exon-scaffold_109-1491911889:283903..284113Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:283903..284113TCONS_00046377-exon-scaffold_109-1510915933:283903..284113Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:283903..284113TCONS_00046377-exon-scaffold_109-1575043694:283903..284113Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:286486..286697TCONS_00046377-exon-scaffold_109-1491911889:286486..286697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:286486..286697TCONS_00046377-exon-scaffold_109-1510915933:286486..286697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:286486..286697TCONS_00046377-exon-scaffold_109-1575043694:286486..286697Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:286991..288566TCONS_00046377-exon-scaffold_109-1491911889:286991..288566Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:286991..288566TCONS_00046377-exon-scaffold_109-1510915933:286991..288566Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:286991..288566TCONS_00046377-exon-scaffold_109-1575043694:286991..288566Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:288906..289039TCONS_00046377-exon-scaffold_109-1491911889:288906..289039Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:288906..289039TCONS_00046377-exon-scaffold_109-1510915933:288906..289039Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:288906..289039TCONS_00046377-exon-scaffold_109-1575043694:288906..289039Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:289464..289630TCONS_00046377-exon-scaffold_109-1491911889:289464..289630Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:289464..289630TCONS_00046377-exon-scaffold_109-1510915933:289464..289630Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:289464..289630TCONS_00046377-exon-scaffold_109-1575043694:289464..289630Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:289983..290185TCONS_00046377-exon-scaffold_109-1491911889:289983..290185Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:289983..290185TCONS_00046377-exon-scaffold_109-1510915933:289983..290185Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:289983..290185TCONS_00046377-exon-scaffold_109-1575043694:289983..290185Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1491911889:290646..291309TCONS_00046377-exon-scaffold_109-1491911889:290646..291309Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1510915933:290646..291309TCONS_00046377-exon-scaffold_109-1510915933:290646..291309Clytia hemisphaericaexon
TCONS_00046377-exon-scaffold_109-1575043694:290646..291309TCONS_00046377-exon-scaffold_109-1575043694:290646..291309Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:273007..291309 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.495893	0	0	0	6.7988	3.20063	9.03317	10.2429	2.92169	14.0173	2.08248	2.02466	4.66834	5.30426	2.41694	2.40304	6.1027	5.99623	6.52082	6.99259	9.35189	8.26463	4.60359	5.86591	1.15957	1.45669e-05	16.3661	6.37429	0	3.48157
Blast
[Close]
BLAST of TCONS_00046377 vs. Swiss-Prot (Human)
Match: ASPP1 (Apoptosis-stimulating of p53 protein 1 OS=Homo sapiens GN=PPP1R13B PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 7.010e-64
Identity = 105/200 (52.50%), Postives = 145/200 (72.50%), Query Frame = 1 
Query: 2401 VILDPFALLLDSALEGEMEMVKRTLMQVPDPSRPNPEGITALHNAVCGNHKEVVRYLVEVACDINAADNNGWTPLHCAAFYNDTELCRYLVESGASVFATTYTDYQTPAHKCSRLDDHYDECFAYLHECKENVGRIDAGLVHALYDYEGQYEDELSFYCGDELTILRRGDNSEKEWWWARDCKGNMGYIPCNLVGNYHRI 3000
            V  +P ALLLD++LEGE ++V+R + +V DPS+PN EGIT LHNAVC  H  +V++L++   ++NAAD++GWTPLHCAA  N   LC+ LVESGA++FA+T +D +T A KC  +++ Y +C  +L+  +E +G ++ G+ +AL+DYE Q  DELSF+ GD LTILRR D SE EWWWAR      GY+P NL+G Y RI
Sbjct:  884 VRFNPLALLLDASLEGEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGWTPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCEEMEEGYIQCSQFLYGVQEKLGVMNKGVAYALWDYEAQNSDELSFHEGDALTILRRKDESETEWWWAR-LGDREGYVPKNLLGLYPRI 1082
The following BLAST results are available for this feature:
BLAST of TCONS_00046377 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASPP17.010e-6452.50Apoptosis-stimulating of p53 protein 1 OS=Homo sap... [more]
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