TCONS_00046179 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00046179
Unique Name	TCONS_00046179
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4289

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_106:331659..347892-

transcript sequence

>TCONS_00046179 ID=TCONS_00046179|Name=TCONS_00046179|organism=Clytia hemisphaerica|type=transcript|length=4289bp
CTAAGCCATGGAAAAATGgttttccattgttttggtaGTGCTCTTCAGCA
TTGAAGCCGTTTCCACAGCAAAGGTGTTTGGTTGTAATATCAACAgtaaa
ttctttcaaaaaacaGTCCAGTTATCTAGCTGTTTATTTTGTGATTGCAA
CGTTGACCAAAATAATATTACTTGCTTCAAAGTTGACGAGAATGAAACTC
GACATACGGTATGCTCTAATTGTCCACAAAAAGGTGATCCAATCAGCGTC
GACTGTCCATTTTGCCAACACCCATTCAACACATCTATCAGAATCGATCT
AGGAAACACCATAGATATATCAACTCAATCGAAATGTGTCTCTTGTCAAT
GTACAAAGAAAGGGAAAGTCATCTGTCAATATGCGGGATTTAAAGATCCG
ATTTGCAGCGACCAAGATTGTCCTTATTGGAAGATAAAGAGGTATCCTAA
AGAGAAATGCACCCATTGTATTGCACCTTTCACAAGAGAGAAGAAAATGC
CAGGAGAACATTGGTTCATGTACAACCCAGATTATTTCGCATGCAATTGT
CTTAAAAATGGATATTTAGTATGCTTCAGCAAACGCAAATACACTTCTGT
TGGAAGttttgaaccaatcagattcaGTACTTACACCACGAAAATGATTG
AAGAATTATTCCAAAGTCCAGATTGTTTTTTCAAGAATCAAACGATCAAG
CACCGTTCATCTCAATTCATTTCTCTTTACGAATTACCCTACTGTTTACA
ATGTAGTTGTTATTTTCGTCAATTGATCTGTAAGAGAGATTACAATACTA
AATGTGAAGGTTATGAAAGATGCAACCAACTTGCTAATTCAACTAAAGTT
CAAAAATATTGCAATTCACCATCAAAGTCTTTATGTCCTAGTGGGATGTC
CTTTAGATGGCGCTCAAGTCATTGTCTTTTAAAATGCGATCCGAAGAGAC
GGCAACCGGTATTTATGAAGATAAAGAAGAAATGGTGTGAGCACGTTATC
CAGAATGATGGTTACTGTACACCTTGTGATGGAGATAGGGATTCATTTTT
GGAAAGACACAACGGAAGCATTACAGTTTGTAACAGAACGAAAGAGCTGC
TTTGGAAGTCAAGTCTTTGCAACCGAGTTATCGAATGCTCTGATAAAGAA
GATGAACTAAATTGCCCGAAAGAATGTCAGATAACGGAATATGAATTCTT
GGGTAATAGAGGCGTCATGAAAAGAGGCTTCAGATTTCAAACAAGATATG
AGTTATCCCACTGTTCTTACTGTCTATGCAACAACACTAATGGGCATTCA
ACTTGTTATAAAAAAGGCTTAAATGGCATCGCAACGgaaaaatgctcaaa
atgtgCGATTATTATCAAGGAACCTTGTTCGTACTGTGAGAAACCTGGCA
ATCGATCAATAATCATTCCGTCTATGCACTCTGTTAACTTTGGTAATGAA
ACAGAATGTATCTCATGCAATTGCACCAAACAAGGAACCATATCGTGTCG
TTATAAGGATATTCGGCAACCCATATGTGGAAACACACAAGATTGTGAGA
CATTGTTAGCGACACTCCCTAAACATCAATGTACTTATTGTGTCCACCCT
TTAAATGGACagaagaaaattcctttgaCTTCATGGAATGTTCAAATTGG
AAGCGATAATATTAAATGTTCGTGTTCTTACGAAGGTGATCTGATATGTT
CAACGGACGAAAGAATTAATGGATTCATGTATTCATTTCAATGTTCTGAG
GAGAATTGCACCAACTTGATGACTAATCCAGACTGCAGATTTCAAAACCA
TACCATCAGACATAGACAATCGCGATACGTCTCGATGTACGAATTAGCAT
TCTGTTTTGAATGTACATGTTTCTTTGGTCAAATTCAATGTCGAGTACGA
GGAAGATCTGATAAAGAAAAACCTATCAAGAAAGATGAATATGATCACAT
CAACAAGCATTGCAATGGTGATAAAGAGTGTTCGAATCTAGCTTTGGATG
GTGATGTCAAAAGTTTGTAGTAAGCCAGCCATTGCTTATTGTCCATCCGA
AGCTATTGAGTGGTCAGCAACCCATTGTAATTTGACATGTGAAAATCCTA
CACGCGGTAGAGCTCGCCAACCAAACTACATCAAGACTCAAACCAGATGG
TGTGATAATATGATGTTCACCAGGGATCAATGTTCGCCCTGCCAACAAGA
TAAAGAGAAAATCTTGGCGAAATACGAGAAATACCTTGTGTCGTGCAATT
CGAGCAATCAATATGTATGGATAGATCAGATCTGTGATTCTTACAAAGAT
TGCATCAATGGTGAAGATGAGAGAAACTGTACAAAATtTTATTGCGGGTT
CGATCTGGATAAACATGGATTTGACTGGCCTTCAAGGGAGGAAAACACGA
CCATTGTAAGATCTTGCGCAATTGATCCTGTAATAGCAAAGAATTTCTCA
CGATTTGGATTGAGTGGCAATATATCAAGAAAGTGTGCGAGAGATGAAGA
CGACCTACTTCATATCAAATGGAACAAGACAATGTGTGCTTGTACCGTCT
CTGATTTCCCTTTCTTCAATAGTACAACGTACGACAATGATATCACTCTT
CTAACATTCAGCACAGTTATCAATGCATTGCAGAATATCCACAAACACAT
CCTTAAATCACCAAGTAATTTTCAACATCTGTATGAAATCAATAAGATAT
TGAGATTGACACACAAGTTGTTGACTTACTCATACCGATATGATTATGAA
CGTTTGCAAGGGCTGAAAGGATATCGCTTAATGAAGCCAGTAGCAGAAAT
GTTCAGAACACAAGTTATGTGCCATGCAGGCGAAGAATATTGGAAGCCAG
CTGTTTCTGTTTTCGTCTCACTTGGGAAAGAATTTGACTTACCAGATTAC
GGCTTTGGTGACTTTGGGTCATCATTTGTCAGAGCTCTTGGAGCAACTTA
TTATACACCACAAGCTCGATTTGTTGTTATGATGGAGGATGAAAGACTGC
AAGAGAACAAACATAAACGGTCTCCACCTAAGATAAATGAAACACATCAA
GTCCATCCCTCTTCTTCAGCTGATAATAGATCTTCACCAAAAAAGATAAA
GAAAGTGTATATTGGCCATACGAAGGACGCATTGGATAAGTTTGAAGAAG
TTTTATCTGGAATGAGTATCGCATGCTTGGTTGTTGGGCTAACGACATTC
CGTTTTGTCAAaGAACAGAATATGAAGTACTTCATCCATCAAAACTTGAT
GATTGCTTTACTGTGCAAGAATTTGTTCTACAAAACAACAACATGGTTTA
TTCCAAATCTTCCGCATAATTCCAAGGCTGGTTGTTTTACAGTATCGATT
TTGTCGTACTTTTTCACTTTGTCAACATTTTCATGGATGATGGTTGAAGG
AATCAATATCATCAtcattgttgtttttgttttcaaaggaAATCGAAATT
ACCACAAACAATATTTAGCCATCGGTTATGgtGTTCCCTTTCTATTGACA
TCGATCTTTGGAGGAGTTTTCAACCAAGCTTTTGCCGATGCTATTGAGTG
TGTCGTTTTACAAAGAAACTATTTATGGGTGTTGAGAGGACCAATATGTT
TTTATCTACTGgtTAATGGTATCTTTTTCATTTGCATTTTGATGAAACTT
CGTCAAGTTGCTAAACAACGTAAAAACATGAATGTCAACACGAAGTCAAG
ctcAAGTACAAAGACGTTTTTGGTGTTGGTGCCACTACTTGGGATACCAT
TTATATTGGCACCCTTTGTTGAATACAGCATTTATATCGCTTACACTTTC
GTCATCATGAATGGACTCACGggtGTGTATTTGTTGGTTGGACACGTCAT
CATGGATGTCAATGTTCGACAAGATATCGACACGCGATTTGATTGGCTCA
AACAAAAGACTGTTCGAATGAGGAAATTTTCACAAGAATCGACGCGAACG
AGAACAAGCACCATGTGAATAAATTGCGAGACAAACTTAATCACTTTCTT
GAAGATTTGAGGATTTAGCTAAGCTACGCCAAAGTCATTTTATTTGAATT
CGATATAAACATGTGGTAGAAACTTAGTAGAAACAAGTATGAACTTCGGC
CTGGATTAAAAACAAACCTATTTACTTTACTTAGATTTCTGTTGGGCCTT
GGGCCTACATAATGAGATTTGTCTTATCGAAATTTTTCATCACTTAGGAC
TTGTTCGTTAAACTTGAAATGAAAACTTTTGTTTAGTAAAATGTTTGGGC
ATTTATCTTTTTCAAAGGGGCGTTTGAAATAAGGGGCGT

Run BLAST on NCBI

transcript from alignment at scaffold_106:331659..347892-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00046179 ID=TCONS_00046179|Name=TCONS_00046179|organism=Clytia hemisphaerica|type=transcript|length=16234bp|location=Sequence derived from alignment at scaffold_106:331659..347892- (Clytia hemisphaerica)
CTAAGCCATGGAAAAATGGTTTTCCATTGTTTTGGTAGTGCTCTTCAGCA
TTGAAGGTAAGACATGGACCAATGGTACATTTGCTTTCTTATTTTGTAAG
AACGTCCAAAAAAATTGAAGCCTTGAGATGTTCTTAACTTTTCGGATTTC
AAGCCTAAAAATGTTCTTCGTGTTCATATTTCAAGCATTTTTTAAGTATT
TTTGTTAATTTCCCTGATAGAACAGGTGTTTTAGAGCCCACGATGCCTTA
AAATGTTGTTAACTTGTTCTTAACATTTTTGCCACACGGAAGCCTTATGT
TTGTTCTTATAAAAAAACGTGTATTTCACTCAGTTAGTGAAATTATTTAT
GCATAAGTTTCAAAGATTATTGATAAATTTCCTCTATAATTTTTCATGAA
ATCCTCCTCTTCCGTATAGACTAAAAAATGTTCTGCTCTTTTTCCTTTCA
GCCGTTTCCACAGCAAAGGTGTTTGGTTGTAATATCAACAGTAAATTCTT
TCAAAAAACAGTCCAGTTATCTAGCTGTTTATTTTGTGATTGCAACGTTG
ACCAAAATAATATTACTTGCTTCAAAGTTGACGAGAATGAAACTCGACAT
ACGGTATGCTCTAATTGTCCACAAAAAGGTGATCCAATCAGCGTCGACTG
TCCATTTTGCCAACACCCATTCAACACATCTATCAGAATCGATCTAGGAA
ACACCATAGATATATCAACTCAATCGAAATGTGTCTCTTGTCAATGTACA
AAGAAAGGGAAAGTCATCTGTCAATATGCGGGATTTAAAGATCCGATTTG
CAGCGACCAAGATTGTCCTTATTGGAAGATAAAGAGGTATCCTAAAGAGA
AATGCACCCATTGTATTGCACCTTTCACAAGAGAGAAGAAAATGCCAGGA
GAACATTGGTTCATGTACAACCCAGATTATTTCGCATGCAATTGTCTTAA
AAATGGATATTTAGTATGCTTCAGCAAACGCAAATACACTTCTGTTGGAA
GTTTTGAACCAATCAGATTCAGTACTTACACCACGAAAATGATTGAAGAA
TTATTCCAAAGTCCAGGTAATTTTAAATGTAGGGAATTACGTTATTCGAA
CTTGGAATATCAAATTGTCCAAATGATCTTTTTATGGTATCTTTTCCCCA
CATCACTAAACAGCTGGGACCCCAACCCTCACTGATGGAAAAATAAATCA
CATACATCGCCCCGCTGGATAAAATATCGAATAATATTCCTATTGGATAA
TCGAAAAGAAAATTCAAATAATCAAATTTTTAAATCTCTTCTGAAGAGGT
CCTTGTACACAGACGTTCGTTAGACGTGATTCGGCCCAATCCACTTATTG
TTGTATTATACAAGAAACTTTTCGTTTGTACTGTCGACTCTTGTTTATTC
GAACTTCTATTATTCGAATCTTTTATAATCCCAACTTTTTCTCAGTTCCC
ATTAGGAAGAAACCATCTTAAGATATTCTCTATAATTAGAATCTCTCTGT
TATTCGAACAAATAAGATTCCCACTTCGAGTTCGAATTAGCGAGAGTCAG
CTAGTTACGCGGCTATCAATGCGATCAAACGATACCATATATTTTTTCTC
TTAGATTGTTTTTTCAAGAATCAAACGATCAAGCACCGTTCATCTCAATT
CATTTCTCTTTACGAATTACCCTACTGTTTACAATGTAGTTGTTATTTTC
GTCAATTGATCTGTAAGAGAGATTACAATACTAAATGTGAAGGTTATGAA
AGATGCAACCAACTTGCTAATTCAACTAAAGTTCAAAAATGTAAATGTTT
ATCATTGAATTCTAAAATACTTAAAAATTCACCTAGTCTGTTCGAGAGTG
TATCCGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GCGACTTTTTCGAATGTTTTGAGCCCAGGTTTTCGGGCTCTAAACATTCG
ATTTTTTGACGTCATTTTTAACTTTCGAAGCTCCTGCAGTATCAAAATAA
TCAAATTTGCGTCAAAGCACTTGAAAGGCTTCTATTTTTCGAAAATCGTC
AAAGTGGAACTCACTAAGAAACGAGATGAAAAATCCCGGTTTTTAGTGAG
GTGCTTGCTAACCCTTACCGGGACTAAAAAGGAGAATACAAAGGAAAATT
TTGGGAATTTTACGACCCTTAGCGGGAATAATTTGACCAATTTTGACCAA
ATTTCGATCTTTCAGGGGGTAAAAAGTTGAAATTTTCCTTTTTTTCCGAC
CCTTACTGNTAATTTGACCAATTTTGACCAAATTTCGATCTTTCAGGGGG
TAAAAAGTTGAAATTTTCCTATTTTTCCGACCCTTACTGGGACGACTGAA
ATTTGATTTTCGGATTTTTCCGACCCTTAGTTATCCACTATAGATTAAGT
TGGAAATATTTCGAAAATATGATATTTCAGATTTGGAAATATCGTGAAAT
ATGGTATTTCCACAACTTTGGAAATATAGAAGAGTCATATTTCCATATTT
ACAAAAGTATATGGAAATATCATATTTTCAATATATTTCCAATATTGGAA
ATCTCTTATTTCGCCCAGTGATTATCAGATTTGTATTTGACCCAAAGATT
TCAAAATTCTCCTGCCGTAGTACGAACAATAATCGTGTTCACTCTTTACA
AAATAGATAAAAGTGTAATAGGAAAAAAAACGATAGCCAAAATTCCAAAC
TTTACATCTGTAAACTCGTGAGCCAACTATTCTTTTTGACCATCAAGTTG
TATCCATAGATTAACATCTAATCTAATTTATGGCCACCAAAATAATGTTT
CTTTATTATGGCTAGCTTTTGTATGGGCAAGTTGATGAATGAATACAGTA
AACTCGCGCTTATTTGAGCTTCTATAATTCGAACTTGTTTCCAGTCCCCG
CTAAGGAGAAACCTTCTTAAAATACTTTCTATTATTCGAGTTTCTCTATG
CTATTAGAAGAAATAAGACGTGATTTCCCTCGAGTTCGAATTAGCGAGGG
TCAACTGTATTCTGATAATTCTATTTAGATTGCAATTCACCATCAAAGTC
TTTATGTCCTAGTGGGATGTCCTTTAGATGGCGCTCAAGTCATTGTCTTT
TAAAATGCGATCCGAAGAGACGGCAACCGGTATTTATGAAGATAAAGAAG
AAATGGTGTGAGCACGTTATCCAGAATGATGGTTACTGTACACCTTGTGA
TGGAGGTATAAGCAGTTTAATGATAGAAAATTTGTCACGGTAAAAAAACT
GACGGTTATTAATTTTTGCCAACGATTAAATTTTGCCGACAAATATTTTT
CACTAATTGGATCTGAGATTATTTTTGTACTTTCTTTTCATTTTTTGAAT
GTTTTGGTGCTAAATTTCAGGTTCGTGTACTTTTTACGACAAAATATTCC
CATAGCATAGAAACCGCCAAGCAAGATGCAATGATTGCACAGTTTATTGG
TGTTTTCATTTCACTGAAAACCAACGTTAAACAATGTCTAATCTAAGGTT
AAGAAAGTTACAATAAAATTTTTAATTAAGTTCTAAGTAACAAACACTTG
TTTCTTTCTATCGGTTCCTTAGATAGGGATTCATTTTTGGAAAGACACAA
CGGAAGCATTACAGTTTGTAACAGAACGAAAGAGCTGCTTTGGAAGTCAA
GTCTTTGCAACCGAGTTATCGAATGCTCTGATAAAGAAGATGAACTAAAT
TGCCCGAAAGGTGAGTGTTTTATAATAATTTTGCTTATTTCGAAGTTGAC
GGCATCCATAGCTCCTTTTAATTTTGAGGTATTAGCTTGAATAAGACGAC
TATTTCAGGCATAGTGGAAAATAAGCCAAACAAAATGAAAGGGGAAAGTT
GTAGTTTATCCAACCTCATAATCCCATAACATATGGTACTATATAACACC
GATATCAATGTATGAGACGAATTATAAACGACTCCAGTCTAGTTGATTGA
GGAAAATCCTCAAATTTTTCTAAAAAGTATTCGGCAGGTTTTTGGCTTGA
ATTTAACTCACAGTATAACTACACGATTTCATCTTCTGTTTTAGAATGTC
AGATAACGGAATATGAATTCTTGGGTAATAGAGGCGTCATGAAAAGAGGC
TTCAGATTTCAAACAAGATATGAGTTATCCCACTGTTCTTACTGTCTATG
CAACAACACTAATGGGCATTCAACTTGTTATAAAAAAGGCTTAAATGGCA
TCGCAACGGAAAAATGCTCAAAATGTGCGATTATTATCAAGGAACCTTGT
TCGTACTGTGAGAAACCTGGCAATCGATCAATAATCATTCCGTCTATGCA
CTCTGTTAACTTTGGTAATGAAACAGAATGTATCTCATGCAATTGCACCA
AACAAGGAACCATATCGTGTCGTTATAAGGATATTCGGCAACCCATATGT
GGAAACACACAAGATTGTGAGACATTGTTAGCGACACTCCCTAAACATCA
ATGTACTTATTGTGTCCACCCTTTAAATGGACAGAAGAAAATTCCTTTGA
CTTCATGGAATGTTCAAATTGGAAGCGATAATATTAAATGTTCGTGTTCT
TACGAAGGTGATCTGATATGTTCAACGGACGAAAGAATTAATGGATTCAT
GTATTCATTTCAATGTTCTGAGGAGAATTGCACCAACTTGATGACTAATC
CAGGTTTGTCTTTCCCAGAGTTTTATATGAAAAGAGTGCCGTGGTTCGGT
AGGAAATGTGACAATTACATTAGAGTTTCAGTGCTTGACAAATCAGAAGC
CTCGCAGATTTTTGAAAACAATATCAACAATATTTTTTGCAATATTTACT
TTTTTTGCTATGAAAAGCTTAAAGCACGAAATCTAGCCCTTCGGGATTTA
CAGATCTGTGGTCTATTCTAGATGGTGAACGGACTACGATAGCGAGTTTA
TGAATGTGTATTCTTCTGTTAGCTTCTGATTTGTATAGACCCTGATCAGC
TGAGAACGACGGTAAACAAGCACTTTTACTGTCCCCGATTTTGTGGGCCA
GAACTGCGGTTTTTTCAAGTTTTAGTCACTCCGTCTTACTCAAAAGTGCC
AATACATAAACTCGCTAAGTGCGTCTATAGCTGTTCAAAAGATTCGTATT
ACGTATTTCAGACTTATTGTTTCTCATACAGGATATGATGTACCTTAAAT
AGACAAAACTATCCCAATTTCTTTATATACGTTCACTTAGATCTTACCTT
TTCTCTCTCTTTAGACTGCAGATTTCAAAACCATACCATCAGACATAGAC
AATCGCGATACGTCTCGATGTACGAATTAGCATTCTGTTTTGAATGTACA
TGTTTCTTTGGTCAAATTCAATGTCGAGTACGAGGAAGATCTGATAAAGA
AAAACCTATCAAGAAAGATGAATATGATCACATCAACAAGCATTGCAATG
GTGATAAAGAGTGTTCGAATCTAGCTTTGGATGGTGATGTCAAAAGGTGT
AAGTATGTTAACAACATTGAATAAGTCAGTTTTGGGAAGAATCGTTTTGG
GAAGAATGCCGCGTTAGTTTCCAATTTCAAGAATTAGTCTAAAAAGTTTC
ACTTTTAAAGTCTGTCATAACTTTCCAACCAGTTGTCGTATACTAAAAAG
TTTGGTATCGTTAGAAATCCACTAATTAGTTTTGCAAAATTAGCCCAAAA
AAAGTGAAGAAAAATGAAGAAGAGACTTTGCTCCTTTCGATATAAAGGTG
TAAGGAAATGATGTTTATATCAATCGGAAGGCGACAGTCAAAAAATATGG
CAACAAAGCATTTAAATATCTTTCCAACGATACCAATGGCCAAAAATAAA
AACACTGCACACCTTTTTGACACAGACTTGAGCCAAAGCGTTGTAAAGAG
AATGTCAATGAAGGACAATCTTATCATTTAAATTCTTACATTTGCTTACT
ATTCAAATTCCAGTTTGTAGTAAGCCAGCCATTGCTTATTGTCCATCCGA
AGCTATTGAGTGGTCAGCAACCCATTGTAATTTGACATGTGAAAATCCTA
CACGCGGTAGAGCTCGCCAACCAAACTACATCAAGACTCAAACCAGATGG
TGTGATAATATGATGTTCACCAGGGATCAATGTTCGCCCTGCCAACAAGG
TATGGTATTTCATACCTGTTACGCCAAAAAAGTATACAGCTTTGTCCCGG
AGTGGGTACTTGAGTACAGAGATGTGTCGCTGGTCAGTCCCAGGTAGGAT
CGTAAAAAGCACAAAATAGAAAAGTCAGACCCTCGTGGGATAGTTTTCTG
GGGGAACTCAAAATGTGGCAGATTTTGGAAGAAAAAGGTGGAGAATTTTG
AGAACATTTTAGAATTTCAGTCCCGTTCAGGGTCACTTTTTTTTGCAAAT
CTTAGCAAAATTTTCGAAAAGCGAGTCCTACGTAGGGTCTATTTTTTTAA
CCTCAGCGGAATACCCCCTTTGGTCGCCAAGGGTAGTACCCCCCCCCCCC
CCGGAAGCTTTGTCAAGAGATTGTGAGCTTATGGTTAAATAGTTTTTGTT
GATTTTTATTCTATATGTAGAGAAAAGCTTAATTTAAATTTTATTATATA
AAACTTAAAATCGGTTATTTAAAAGATAAGTTAGAAAAATAAAAGTGTTG
ACCTATACCCAAAATGTCAAAATTCATTAAAAACATGGAGATAAACTTAC
TCAACTAACAATCAACAAAACTAAAACAACCAAAAATCTTCAACCGTAAG
CTCGCAATATCTCAATGATGCTATATGTTCTTTTTGACGCGCCCTATAGT
ATCATCTCATTTCGATTCCAATTCTGCTTCAAGTTTAATCATCGAATGAA
TGTAGGAATGGTGCAGAAATTGTAAAGCAGAGGACCTGGGATGCCGGAAC
AATTTGCCAGGAGAGTAGTGTAGTTATTCTTTTAACTTGCCCTAGGTAAC
CTGAGAACAAATGGTCATAAATTTCTTACGTACACAGCAAACCCCTGGTC
TCTTGACGCTTGAAAATGAACCATCCGAGGAAAATTCTAAAACAAGAATC
TTGTCGATTCGCACCAGAATGTCAAAAATTGAATTTCGATCACTTTTTAA
ACACAATCACGTAACTTTATTTGTTCTCTTAGGGATGCGCATTCCTTACA
AAATCCAGATAGCTTATCCGTCTTATCGTTTTTTTTCACCTATCCCTTTA
GAGCTACATCCTGATTGGTAGAAGCCAACCACAATCTAATTTTAGTTTAG
CCCTAGTCCGCTGACACCCTCTCGTTACGAATACAATGTGCGTGATTATT
CTATTCTACTTGTGATTCAGACTAAAAACTTTTAGGTAACACCAAGTTTG
AGTTTTCTAAGTTATGTATTTTTTAATTTACACAGATAAAGAGAAAATCT
TGGCGAAATACGAGAAATACCTTGTGTCGTGCAATTCGAGCAATCAATAT
GTATGGATAGATCAGATCTGTGATTCTTACAAAGATTGCATCAATGGTGA
AGATGAGAGAAACTGTACAAAATGTAAGAATTGCGAAAGGACTCAAATCC
TCATCAAAAAAGCCTTGTCTCACAGCCCCGGTGGAACTCATTCAAACAGT
GAGAATAGAAATGATATTGCTCCCTACTCAAAAAATCCGGTGGGGATGGT
TTTGGTGCGCAGTTTCTTTTCACTGAATTTCAAATGGGGATGGAAACAAA
GTTCTCCAACGGGAATGAAATTTTAGCCTAATTTTACAGTTGGTTAGGGT
CCCACCGGGTCCGTTACACAGGGGTGTATCAAATTAAATCTTTTGAAGTC
TGCTTTTTGGAAATCTTCGAAAACGAGTATGGTTTTACGTGTTTCAATAT
TTTCTCGCATTATAATATCTTAAAGGCCTTTAAAACGAGGATTGATTCAC
TTTCCCTATGGCATTAAATCAAAATATGAAATTCGACGAGACACTAAAAA
TTAAGACTTGTGTAATATAGCATGATGCATTGAAATTTGCATCCAAAGCA
AAAATACTTCTATATTCTTTGAAGCCCCCCTTTGAATAAACAATTGTAAG
AATAATATTTCTTTGTTTAGTTTATTGCGGGTTCGATCTGGATAAACATG
GATTTGACTGGCCTTCAAGGGAGGAAAACACGACCATTGTAAGATCTTGC
GCAATTGATCCTGTAATAGCAAAGAATTTCTCACGATTTGGATTGAGTGG
TGAGTCCATTGAGTTTAAAGCCTAGAGGGGAATCTTCGACCTTTTATTTC
TGAAGCGACAAAAATGAAGCCTTAAGTCTCGCAGTGCTTTTTCAATTATG
GATGTATAATTTAACGCTTTCTTTTTTTCATGCGGCATATTTTTCGAGCT
TTTATTTTCAACTTTGCGTCTGTGTGAAAAGACACAAAATTTCAAGGAAA
AGAAGCTAGTTGTTGGGAGCAATATTTTGTATTTTAGTATAAATTTGTAC
TATTTAGGCAATATATCAAGAAAGTGTGCGAGAGATGAAGACGACCTACT
TCATATCAAATGGAACAAGACAATGTGTGCTTGTACCGTCTCTGATTTCC
CTTTCTTCAATAGTGTAAGTGTACAAGTATGTTTGATTTTAAGCTCTTCT
GCTTAGGTGAACTCAATTTTTGATTTTCAAGTTCTAGGAACTCTTTATCG
AATCACGTTTAAGTGTTTTAGAGAATGGTTTTTAAGAGTTAAAGAAAGAA
AATCGTGTCTTGGGCATACTAGCACAACGTCCTTCCCTTTTTTGTATTTT
TTTTGTGTTTTTTTTCTCCGAATTAAGATCACAATACAGTGGACTTTACC
TTAGATATTCGAACTTAGATATTCGAATATTTCTACAATTCAAACTAGAA
CAGTGGTCCCCTTAGCTCGCAAGTAAAATGCTCTCTATAATCCGTATCGA
AAAGTCTTAGTCCCTTGACGATCGAATAAGAGAGAGGCAACAATATACCC
AATACTTTATTTTTCAGACAACGTACGACAATGATATCACTCTTCTAACA
TTCAGCACAGTTATCAATGCATTGCAGAATATCCACAAACACATCCTTAA
ATCACCAAGTAATTTTCAACATCTGTATGAAATCAATAAGATATTGAGAT
TGACACACAAGTTGTTGACTTACTCATACCGATATGATTATGAACGTTTG
CAAGGGCTGAAAGGATATCGCTTAATGAAGGTATCGTTTTTTCATATCAA
GCCGGTTGATCTTTTGGCTCAGGCCTTGTAGGGATTTGGGGTNTGTATCG
TATTTTCAAATCAAACTGGTCGATCTTTGGTCCAGGTCTCCGTCGACAAC
TTGTCTTTTTATATTTGGCCGGCAATCAATAACCATACAATCTCAGCTGA
CACACAACGTTGTTTCAACGTTCATCTAATATTATATGGACGTTATGAAT
GTCACATAAACGTTGAAACAATGTTGTGTGCCAGATGGGAACTATCAACT
TCAGCGTGAGTTTAGTCTTACCCAGTTCCTCTAAACATCCAACTCATAAT
ATTAGATATTTCCTTATCTCTATGTGTGATTTCATCAAGTGGGACCTCTC
AAAATCATTTGTGTGGACATCAAATGGAGGAAACGGTTTCCAGAATTCAT
TGATGGAACATTTTAATACGATGCTTCTAGGACTGGAATGTGTCAAATTA
GGCGTTAATTAGTCGATCCGAGTATTTAATGCATATCATATTTTTAACAC
TAAGTCTGTTTTGATTACCCCTGTAGCCAGTAGCAGAAATGTTCAGAACA
CAAGTTATGTGCCATGCAGGCGAAGAATATTGGAAGCCAGCTGTTTCTGT
TTTCGTCTCACTTGGGAAAGAATTTGACTTGTAAGTTTTTGCTTTGGTAA
CCAATAGTTCCTTGCCTTTGATTCGTCCGTCCGTCCGTCCGTCCGTCCGT
CCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGATCGAAACGCCCCAATAAAAC
CTGATTTCCATGGACTTCTTTTTCAGACCAGATTACGGCTTTGGTGACTT
TGGGTCATCATTTGTCAGAGCTCTTGGAGCAACTTATTATACACCACAAG
CTCGATTTGTAAGTCGAAACAATAAATCAAAGTAATCTTTCGTAGGTAAA
ATTTAGCTACAGGATGCCCTGCATGCTGGATATATCTGTCTCTAAGTTTG
GAGCACAAAACCAGCTTAATAGAAAACTCTGCCTTCCTTACAAGACATAT
TTAAAAGAAGAACTGAAATTTTTAAAAATTATTTTACTGACATTTTGAGA
ATGCAAAAGTAATTGCATACGTAAAATCCGATCCCATTAAATCTTTTTCT
TCTTCCCTCAGGTTGTTATGATGGAGGATGAAAGACTGCAAGAGAACAAA
CATAAACGGTCTCCACCTAAGATAAATGAAACACATCAAGTCCATCCCTC
TTCTTCAGCTGATAATAGATCTTCACCAAAAGTAAATAATTTTCATGTCG
GTGTTATGTCAAATACATCTTTTAGCTTGCAGTCAATTTAGCTTATAAAA
TTGTCTCTTTTATGTTATTTTTTACTACATGGGAGCCACTCTCAAGGAAA
TTAGCCTATAGGTTTCCATATGGATGTAAAAAAGAGTGAACACTGCTGTC
GATTTTGTGGAGACGGTTTAAAAGTTTAATATACCGTTTAACACATTCAC
TGCCAATATCGATAGTACTTCAAAGGATCCGTAACTTTTGATAATGGAAG
TTTGATTGCTTTTTATTGCTATTTTGGAATCTTCGTGAAATTCTGCGTCG
ATTATGGTGCACTTGAAGCAAAACGTGGCAACAGGAGCCTGTGAAAGTCA
AACTTTAATACCATTTCTCGATTTACGAGAATGTTAAACTATTTTTCTAC
AGTTGACACGTTGTTTAATTGGATTTTCATCGAATAGTAGTGCTCCGTTT
GTTTCTTGTTGACGGCGACTTTCAATATTATCGAATAATGGAGCGTATCG
AATTGGGAGAGCGTCAACTGTAGTTTTGAGAATCTTTCTTATCGTTGTAG
TGACCTCTTACATAATGTTGTTGTTTGTTTTCGTTTTAGAAGATAAAGAA
AGTGTATATTGGCCATACGAAGGACGCATTGGATAAGTTTGAAGAAGTTT
TATCTGGAATGAGTATCGCATGCTTGGTTGTTGGGCTAACGACATTCCGT
TTTGTCAAGTGAGTCATTTAACCAAACATCCAAATTTTTGAAACCTTTGG
ATGTTCCTAAAAAAAAATTTAACCCTAAAAATGTTCTAATGATGTTCTTA
TTTTCCCAATTTTTTAATTAATTTTGTCCTTTTTCCTAAGAAATCAGGTG
TTTTACATTTTAGGTATGTAAAAAGTGGATAGAATCTGCATTGGCACTTT
ACCCATTCTCGGATAAAGATTTTGTTTATCGATCGATTTTCATTTTATAG
AGAACAGAATATGAAGTACTTCATCCATCAAAACTTGATGATTGCTTTAC
TGTGCAAGAATTTGTTCTACAAAACAACAACATGGTTTATTCCAAATCTT
CCGCATAATTCCAAGGTATTTCATGCCTAACCTTTGTAATCATGTCAAGT
TGAAGTTCCTCGATGAATAAAAACACGGTGCCCTGGTGGAACTTTTTTCC
ACAGTGGGAATAAAAATTTCCATTGAAATCTGAATGGGAAGGGAAATTCT
ATTTTAATTATATTAAAAAACTCTCAAAAGTTGGAATGGTTTTATAGTGC
AATTTTTTCCACTGAATTTCAAATGGGGATGAAATCAAAGTCAATTTACC
AGTGGGACCGTACCAAAGGGGTGTATCAATACAACATACAACCGTCGTAG
CTGGATTTCCTTTGAAAACTATTTAAGATTTTTATATTTATTTTATCGAT
TTTTCAGGCTGGTTGTTTTACAGTATCGATTTTGTCGTACTTTTTCACTT
TGTCAACATTTTCATGGATGATGGTTGAAGGAATCAATATCATCATCATT
GTTGTTTTTGTTTTCAAAGGAAATCGAAATTACCACAAACAATATTTAGC
CATCGGTTATGGTGTGTATAGCCTAAACTAAAAATTTCAGAAAATTGAGA
TATTAACTCAACAAACAAAGTTTAGAGAATGAAAGTATGAATCTTATGTT
TCCAAAAGCTTCCATAACCACATAGCACAGTCAAACCCAAAATTCACTAA
CCAATATCCAAAAAATTACAACTGTCCTTTTAAGAAAGTTTTCTGTATCA
CCATGAACCGTGTTTCCATGGAAAATAAATTCCCCAGATTTCTTTTCATT
TTGTGTTTTCATGTGATTAGGAAATTATATTTTCATTAGTAAGTAGAGGG
TTACCCTATTTTTGTTACATAATTTAGCCGCGTCATGGTATCCTTTCGGG
TTTAACGGCGTTTGCACAAGCAAGTGAATTGCGTTCTGATTGCAGAAGTC
AAATCGCTTTAAAGACTAGGCAGTAAACCAGAAATATCTGTGAAAACTAG
AAAGTGAAATAATTTACCGTTTGGACATCAAGGCTACGGTATTTAGTGTA
ACTGAACTGAGACTTTTTTGTGTCTTTTTTGTGAGAAATGCATTATGCTG
TTGCTGAAATCAATAATTACAATGATGAAACATGCTCTATTACTTTTATC
TGAGATCTGACATACACGCAAGGGAAACAAGAAAAAACACCCTGACTTTT
TGAGTCAATTTACGATAAAAATCTGAAATGTTTCAATATATCAAAAACTA
GACTGTAAAATTGGTTTAGGTAATTGTAAAGCTATGGTATGTAGTTTAAA
AGAACTGAGACTTGTTTCAATAGGTTACACTTTCTCACATTGAAGAAAAG
CAAGGAAAGTCATGGTGAGTTAGGTGTTTAATAGTTTTTATGATTCATCT
TCTTTTTTTTAGGTGTTCCCTTTCTATTGACATCGATCTTTGGAGGAGTT
TTCAACCAAGCTTTTGCCGATGCTATTGAGTAAGAAATTCTTATATCAAA
GAATATTTTTTCAATACGCACTAAGTTCATATTTTTTTCAATACACTTTA
AAGTATAGAACATATTTGCGAAAATCTTAATCAAAAATGTGCTTCAAAAC
TTCAAAGCTACTGAGTACTACATTTTAAAACAGACTTTGTTGAAATGATC
ATTTAGAGTGGATGAATTCAAACTCCCAAATTGAAGAAAAAATAACTGAG
AATTTTCTATACGCGAATTCAAGTAGATAATAGGATGCTCTAAATTTCAG
TTATTTTATTTTGTGACTTCTAGGTGTGTCGTTTTACAAAGAAACTATTT
ATGGGTGTTGAGAGGACCAATATGTTTTTATCTACTGGTAAGTTCACTGT
GCAAAAGTACACGTTTCTCTCTCTTCTTTCTTTCTTTCTGCTACTGGTTT
CTATAGAAGAATCTACGTCTATGCCACTGACCCAACCTCGTTCCCTGCAT
ATTATCAGCTTTTTTATGCTTACTGATATCAATAGATAATATTCTCTGGT
GTCAATCAGTAACGTAAATAAAGCCTGGGATTCACGGAGACTGACCTTTA
TACTATGGAGAAAGCTTCTCGATTCCAGTCAAGCAAAAAATCTTTGATTT
CGAAAGAGAGGTGTATCACCACTCAATGTTGGTTTTTAAACGGAGGATTT
CATTGATTTATAACTTGACCCACATTGATCAAAAATAACGTATATAGCTT
GGTCCAGGGTATGTTGTCTATACCCATTAATTATTTCCATATTTTTCATG
AAATGAGAGTTCTGCTTTCTAGTTAGACAGGAGAACCGTCGTGTGTTTTT
TTTATAATTTGATGTACACAAGACGGGTTCGAGCTGTGAGTCCAATATTG
GACTCACATTTTTTACAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTCTCACTTACTAAAATAAAAACCAAATTTCG
AAAGTTGCGCTTTCTCTAAGAAAGTGTGACCAGTAAAAGAATAACAAAAT
TTGATTGGCTATGTTTTCAACCGTTATTAGGATCTGAGAAATTCAAACTC
TCAGCCCATACCATGCTATACATTTCGCCATCAGTTTATAAAAGAAGAAA
TCATAGCATGGATTCCCAGGCTACTTTCTAGTAAGCGGCTTGTTTCCTTT
AGAGCAAATATAGCACAATATGATATCTTATCTTATTGTTTTTGTGACCT
TTTTTCGTATGCATTACGTTTCTAAACATGTACTTTTGAAATTTTTTTAG
GTTAATGGTATCTTTTTCATTTGCATTTTGATGAAACTTCGTCAAGTTGC
TAAACAACGTAAAAACATGAATGTCAACACGAAGTCAAGGTACATAAACG
CCAGTGTTGTGATTTGTGTCCTGGTGGTGGTGGCCCCCAGCTAAATCAAT
ATGGCGCCAGAAACAAAAATCCTGTAATATTTTTGCAAAACCCAGCTTAG
GAAGCGTGAGAAAGCACTCATTTATTACGAAAATTGCACCCTTTCCCTTT
CTTGAATATCAATGTTTTTATGACATCGTGTTCTTCTCTTTAACTGGGTG
GACCACATTTATCTTAAAATTCTCTTAAGTTAACTGAACTTAGAGGTTTA
GAGGGGGCGCCAAAAACAAAATATCTTTTAAAGGTCGCCAAATATTTGCT
TGGGATTGATATTCCCGTGTTTTCATGACTGGGAATTTCATTGTTTTCAT
GGAAAAAAAAACAGCGCAAAGTTTTACAGTGAGGATTTGTTGATTTTATT
ATTTTCAGTGAAGATGAAAATTGGAGCATAGTTTTCTACTGGGGACGATA
TTTTGGCTAATTCTTCCAGTTGGAAGGGTTCCCACTGGGTCTATGAGAAG
GTGATCTTGATATCTGGTTCGAAGCCTCGCTTTTCATGTGTGTTATCTTA
TAGACTCTCCTATATAAAAAGAGTTACCGAAGAATTACTATTTGGAGGAT
TACTAACGCATGAATAGACGACTGTTTTTAAAATTTTCAGCTCAAGTACA
AAGACGTTTTTGGTGTTGGTGCCACTACTTGGGATACCATTTATATTGGC
ACCCTTTGTTGAATACAGCATTTATATCGCTTACACTTTCGTCATCATGA
ATGGACTCACGGTATGTGGAAATTTTTTTTCATGATTTTGTTTACTGACT
GCTGCGACTATAATTTTTCAAATTGCTTGATAATTTTTACTAAGAAAGAC
ACATTATTTAGACATTCATTCTCACAGACTCGGTAGGATTTCTTCAGCCA
GTGGGGAATAAATAACGAACTGAAACTCGATGGAGATAGATATTCTAAGA
GTTTTTGGGGATTTCAATTCTTTTGCTTTCCAGTCAGAAAATTCAGTGGG
GATGGGAAAAATAGCATAATATTTTGCAGTGAGAATTGGTTTATTTGATT
ATTTTCAGTGGGGACAAAAAGTGGAGGATAATTTTACACCGGGAACGATG
TCTTGGACAAATTTTCCAGTGGGAAGAAGTCCCAGTGGGTCTGTGAAAAG
GGGGTATTTTAGACAGCGAGGCTCACTTTGGTAAAGGCTAACGAAGAGCA
TGTTTGACAGAAGGAAATCTGATATTCAAATTCCACACTCAAAGAAAATG
TTTCTTTATTTTTCAGGGTGTGTATTTGTTGGTTGGACACGTCATCATGG
ATGTCAATGTTCGACAAGATATCGACACGCGATTTGATTGGCTCAAACAA
AAGACTGTTCGAATGAGGAAATTTTCACAAGAATCGACGCGAACGAGAAC
AAGCACCATGTGAATAAATTGCGAGACAAACTTAATCACTTTCTTGAAGA
TTTGAGGATTTAGCTAAGCTACGCCAAAGTCATTTTATTTGAATTCGATA
TAAACATGTGGTAGAAACTTAGTAGAAACAAGTATGAACTTCGGCCTGGA
TTAAAAACAAACCTATTTACTTTACTTAGATTTCTGTTGGGCCTTGGGCC
TACATAATGAGATTTGTCTTATCGAAATTTTTCATCACTTAGGACTTGTT
CGTTAAACTTGAAATGAAAACTTTTGTTTAGTAAAATGTTTGGGCATTTA
TCTTTTTCAAAGGGGCGTTTGAAATAAGGGGCGT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_029494	XLOC_029494	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_106	supercontig	scaffold_106:331659..347892 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	8.61495e-06	6.5586e-09	0.0331029	0.000146534	0.162761	7.11489e-06	0.00372345	1.70633e-06	0	0	0.139667	0.217135	0	1.33909e-10	0	0	0	0	0.00417226	3.23227e-08	0	0	0	0

Blast

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BLAST of TCONS_00046179 vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.052e-16
Identity = 73/290 (25.17%), Postives = 132/290 (45.52%), Query Frame = 3

Query: 3114 GHTKDALDKFEEVLSGMSIACLVVGLTTFRFVKE----QNMKYFIHQNLMIALLCKNLFYKTTTWFIPNLPHNSKAGCFTVSILSYFFTLSTFSWMMVEGXXXXXXXXXXXKGNRNYHKQYLAIGYGVPFLLTSIFGGVFNQAFADAIEC-VVLQRNYLWVLRGPICFYLLVNGIFFICILMKLRQVAKQRKNMNVNXXX-XXXXXXFLVLVPLLGIPFILAPFV--EYSIYIAYTFVIMNGLTGVYLLVGHVIMDVNVRQDIDTRFDWLKQKTVRMRKFSQESTRTRTS 3959
            GH + AL     V   +S+ CLV  L TF  +      +N +Y IH NL  A+L   +    +    P         C  +++L ++F LS F+WM+VEG+++  +V+ VF    + H+ Y  +G+G P L+  I       ++  +  C + L    +W    P  F ++VN    I +   + Q++     ++ +  +   + K   VL+P+LG  ++         ++   Y F  +N L G+++ + H +++  VR          K KT   + +S  S+  RTS
Sbjct:  561 GH-QVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPG-----TTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAA-------FKHKT---KVWSLTSSSARTS 834

The following BLAST results are available for this feature:

BLAST of TCONS_00046179 vs. Swiss-Prot (Human)

BLAST of TCONS_00046179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRD1	1.052e-16	25.17	Adhesion G-protein coupled receptor D1 OS=Homo sap...	[more]

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TCONS_00046179 (transcript) - C. hemisphaerica