TCONS_00045989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045989
Unique NameTCONS_00045989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length364

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045989 ID=TCONS_00045989|Name=TCONS_00045989|organism=Clytia hemisphaerica|type=transcript|length=364bp
CTGATCGACTGGTAAAGCGAGaccaaaaaccaaaacaaagatggcggctc
aCGATGGAGGTTTTTCTGGTGAAGGATCAAATCAACCCATCAAAACAACA
CCAAAAGAAGCATTAGTAATGGCTTCAATACTGAAAGAAATGGGAGTTAA
TGAGTATGAACCAAGGGTGATCAACCAAATGATTGAATTTTCCTACCGGT
ACATAACGGATGTGATTGAAGATGCTCGAGTGTATAGTCAACATGCAAAC
CGTAAAAATTTGAACTTAGACGATGTGAAACTTGCGGTCACTCAAAAGTT
GGACCACTCTTTTACCTCACCTCCTCCAAGAGAATTCTTGTTGGAGATTG
CACGCTCCAAGAac
Run BLAST on NCBI

transcript from alignment at scaffold_105:265339..284888+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045989 ID=TCONS_00045989|Name=TCONS_00045989|organism=Clytia hemisphaerica|type=transcript|length=19550bp|location=Sequence derived from alignment at scaffold_105:265339..284888+ (Clytia hemisphaerica)
CTGATCGACTGGTAAAGCGAGaccaaaaaccaaaacaaagatggcggctc aCGATGGAGGTTTTTCTGGTGAAGGATCAAATCAACCCATCAAAACAACA CCAAAAGAAGCATTAGTAATGGCTTCAATACTGAAAGAAATGGGAGTTAA TGAGTATGAACCAAGGGTGATCAACCAAATGATTGAATTTTCCTACCGTA AGTTCAATAAGTTATCACATTAAAcaaagtttaaagttttattatatttt tttattttttttttggctttttgaaACTTATCTTAGTCCAGATATAGCCT AGTCCAGACGGTgacagacggtactaatcgaacgTTTTATTGTGAACATT CGATAGTCAGTGACCACCTATCGATTTTATcggtgatcgaatactcacac TCGACTCCAGATTATTTTcgatttgttcaatcatttcgCTCGATTACTTT TCGATTACCTTCGATTGTATTGAGTACCTTCAAGTGAGTGGCGTACAATT TTTCTGAATTGCGGAaattgacccttttttcttcagaACTTCCAGAATCA GGCAAAATTCTTTTGGTAGTATTTTGGAaatctgaaattgtttcggtttc ggaaatccatgaatttttgcttcaaaatttcggtattttatccccttttt tcgaaattcatagctacatgaaaaatcaaaaattagtcaaaatgggaaaa atacccaaaaaaatcggtatcggaattgcaaagtatttttttacggaatt tcggaaattttggcaaaattattcggtattttgGAAAttgcaaaccccgt acgcccccttcGATTGTATTGAGTACCTTCTAGccttcgattttatcaaa tatgttttcagtagcagcgcgtcaaaataatctgaaaccaagttTATTTC GGCCAATTAAAACACGCGATTCATGCgcgaaaaccactttcgttttctcc gaccaatcagaatgcacaaaaaccactttcgttttctccgaccaatcaga atgcacaaaaaccactttcgttttctctgaccaatcagaaagGGCAATAt gagttacttgaggaaacccagCAGGGCAAAATCACACAAAATGGCGGGTG AAATGGCTGGGAAATAAGGGGGTCAATCTTTATGGCGGGccttctttttg tgctttggttttaggtcatttttttggtttttcttaaagatatatcatag taattggttattgaagtaatcaattggttatcgaagttgtcaaagttatc aaaagtaatcaataacaatcaaagtactcgaaCGTTTATTGAGTCTTCGA AGActtgttaagaaagtgatcgaaaactcacaatttttttgaaattttgg tactcaaCATTCGATTGTTAATTGATAAGTGATCGTTCGATTACTTTGAG cattatcgattacttcgataatcACATTTATCGATTAGTATCGTCTGGTT TAGTGTTTAGAAAGCATCACTGgtcttttcgcctttccatttgaatccat cttgaattgtatgcaaaaatatgggaacgaaaaagccgtggttggattta gttgggaaatatgcaaaacataccgtcaactgctctaacttgggacgatt ggtcaaaacacgGGACTGTGGATATCTggcacttactgttaaatctcttt gacaaaaaatttgttttgataactccaccaagtttatcaatcatattttc tatcataacatgtcacgataacttttactgatagcgcgccctttttaact tttttgttttcattcaaaatgaccggatgccgattggagaattagagaac gccagCCGATTAGAGAATTAGAGAAAGCCCGCCGCCTAACCGACTATCGC CCAATGAGATTAACAAAAATGAGTGTGTACAACTTGCTGCGCGAGTGACA TCAAACGTTCCAtcattttgccactaatttggtggttttcttcgttccag acattcgtgtgtgttccactacagatttttttcatatttcgatttaaaag cctacttggtgcgaaagagaaaaaggaaattttgtaatacgccgttcatt aactcaactcaaatgactttggaggttgaGTGAAATGGTGCCTGAATTGC CATCCTATGTTTTgccagatagtcccaagttagagcagtgaCGGTATGCa agcaagtttacacaaagattaaaaagacaacaaagtatcttataaagaaa tattataatcattagaacaataaaagatggaatttcttaataaaaaaaaa atatttacagaacaacagaagccttttagaaatttttttttttNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGCAATATAGTGAAGACCAGT TAAAGCTTCTTCACCGATTAATCtcattattttagaatttacaCAATCGT GTCCTCCTGCTTTGTTAGGTTTGAAGACATGTTTAAAGATTCTGCTCAGT TTGTAGAATTCGTAGTTGACATTCGATATTGTAGGTGTCACTCTGTAAAT ATGGCTCATCAGGTCTGAATTTTCAGGTATTTTATCAAGCTTCCCAATGT TCGCAAAATAGTTATTAAGAATATTACATTTCATAGGTTCATCGGTCGTA AGGACCCCCTTTTCATCCTCTAGAGGGCCGACATTCTGTTGTTTACTTTT TCCGATAAATTCATTGATACAATTCCAAAAGTTTTTACTTGAGGGAGAAA GCCCCTGAAATTTATCCCTCCAATATTTTGCTTCAGCAGTTCTAAGAATT TTAGTGCAGTGATTTTTGGCTCTGCGGTATATTTTCCACTCATGAGAGTC CTTTGGTGTTTTTTGGGCTGTTTTAAGTAGTTTGAAGCGATTGTTTAACT GTTTACGAATTAGTCCATTGATCCATGGATGTGATTTTGATCTTATTTTG ACTTTACGTTCTTTGAAGTGTTCATTGACAGTACTATTATACAAGCTTTC CCATACATATAATGTATCATCAACATCGTCAAATATATCACAAACTTGCC ATGGGGCTGACAAGATAtcatttttcagctgttttataTCAATGTTTTTG TAGTTTCTAACAGTTTTTATTATCGGTTTTTCCTTTAANTAATGTATCAT CAACATCGTCAAATATATCACAAACTTGCCATGGGGCTGACAAGATAtca tttttcagctgttttataTCAATGTTTTTGTAGTTTCTAACAGTTTTTAT CATCGGTTTTTCCTTTATCTGTACTGCGGAGAATGAACAGAATATAAGGT GGTGATCTGAAATTGCAGGATCCATTGATTTTGCATTATTTATCTTGTGT TTGATCGCATTTGGTATAATTATGTGATCAATGAGAGTTTTGGATGTTTC TGTGATGTGCGTAGGTTCTGTGATTGCATTATGTAAGTTGCGGGTGTTTA ACAGTTTTTTTAGTTGATTTCGAATAGGTGCACTAGATTCGTTTTCCTCT AACATATCAATATTCAGATCTCCAACAATAATTACATTACGTCTCTTGGT TGTTATCTCACTAACAATGGTTTCAAATTTGGTAAGAAAAGTTCGATGTT CACATGGGGGTTGATAAACACAAGAAACAAGAAATCTCTGTGATTTGACA TTGCATTCCAACCAAGTCATTTCAAGATCTGTCTCATTTAAGGTTTTATA TTCAATACCGTTTAGGATTTTTTTATGGTAAACTATAACTCCTCCCCagc cattttcagtttttctgtCACGACGCAACAATTCATAGTTCTCAATTTCT ACTTTGTCATCTGATGTATCTGGTTGAAGATGTGTTTCAGTGATAGCAAG GATGTCTAGATTAGTTTCTTCCAACAAAACTTTGAGCACGTTTAGTTTTG CAAGAAGTCCATTTATGTTGAGGTGAGCAACTTTTATTCCGTTTCCTTCA TTGATTTTTGTAGCAATCTCTTTGAACGCTTTCATCATTTCCTCATCGAT TTCTAAATTAATTTCAGTATCATTAGTCAAGAGTTCATTTAAGTTTTCAG TTGGTATACGGTGACAATTTGGACAAAGCCAGTTAAATGTTTCCAATATT TGAAGTTCATCATATCGCTTTGGACTGATCTGGCCACATTTGATATGTAT CCAATTGGAGCAACCATCACATTCAATTGCTCTATGTGATATGGCAACAG CACGATTGCAAATAGGACATCTTGGAGCCATTTTATATAGTGATTTTAGA CAGGTTGCCGCCTTTTAGTGGACGGATCTctgtctttgtttatttttctt ggtCATTcatcttattcactaattcttattcactaattcttaatggagtg aatttttttatcttcttaaagacatagcatattctgtttccatgccatta aaaaattccacgaagacagAGTACTCAcatcaactttcaaaacatgcaaa ctgaaagcagtaattatgatgtCACACATTCTTTCCTgtgcaagaaaata ttaaagccactcatagtgtgcaccccccccagaatagtggggggggggtt ttgctgatttgggtcgaaaattttcaggtgggatttggggttttccaggt tttaggtgggagaaacaagttaaggtgggagttaatttctttaggtggga ctttgggtgttttggaaaaagttaaagtaaaatttcttattttcagattt tatgNNNNNNNNNtatatttttttatatatttcataaatgtatataatag acatattaatatattttggatttaacacaggttaaattgcggtttaactt ttatttgataagcactatatacagtattcgaatggctgggtggccgccat ccgccaactgagtctactttgctaatagccatgtgacgtcatgttcaaaa tggccatcacatctccctgttcaagtcgacgctctaactgaaagctgaca ggatgaaatattttacctccctccctccctgcagttatgcttgtaggcga tcctcacttatttatactaatattgtagttattgggacaaattttcccca aaacttattattcgaggattagccataatttcatgccaaacttatatcta acgactcacacttacttctaAGCCATCTGActacttgattggtttctacc cctaatataggtcataggcaaatggaaagttaaacatatataatatattg catcttcatattacggtaaagaaattttgttttgttcctcgaattagtat atattttttgtttttagctgggatctgggagtctgggctgaaggtgggaa ttttaggataaagtgggacctgaattttcaggtgggacctggaaccccct tgcacactatgccactgtttttatatatagtcatctggggtaattacggg atgACTTTGACTTATTTGGGCATTACTCTGAAAGTATAAATCTTAGAGAT CcgatcttttgatattttatttaaattaaTCAAAGTATAACCTTTAAACA AGACTTATTACTTCTCCTTGAAATTAATTAATTACTAGATTTTactaaaa ttcattttaaaggTGATCTGTAAATACCCCGTATTTTTGGGTAATTACAG GACACCCTTGGAGAAAATATGGGACAggtataaaatattgaaaaatccat aaatatctttccaaaaggtTGTGATATTTGAGGTTTTGCATCCACTTGAC TTCAACAAAATTAGTGACAGTGTCCCATTATTTCTCCAGCTTTTTTCCCA TTTGGGAAATCAGTAATATTTGTATAGAGCAATTTAGACCAATAGTCCAG TAGAATTTAgggtcaacctagaaaaaattattataaaaggtttctatata ccgttggaaagataattttatcagctttcaaatgaggggtagaGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTCATttgaaagctgataaaattatc tttccaacggtatatagaaaccttttataataattttttctaggttgacc cTATTATGGACGAATTTCTACTGGACTACAACTGAAGTATTTTTAGATGC AAACCTTTGCAGGCTTTGAAAGACTTAGAGTGTAGTTATGATTCtagaaa atcaagtttgtagttttcttataaaaaataaacacttcAAACTCAAACTT TGTGTCCTATAATTACCCCAAGATTAAGATCTTAGATGATCTAAGATCTA AAATCttagatattttcattttgaagaactggtgcaaaaaagtaaaaaat caaaagtttcattttttattaataataataataataaaattctaCGACCG CCTAAATTCTAAGCTTAGTCGGGATGGAACAGTCTCTCCAGCCACACAAA GCCTACTTGTGTTCGTGAGAGACTATTCCATACCAGACCTTCCTCATTTC TTGCTCATGGCAAGGACACAAAAACTATTCaaattcatatttttgttttc aatcacTTGATCCAACAGAGTTTTCACAGGACGACCTTTCTTTGTATAAT GATCGGCGTTAAACATAAGCAGTTTTGTTGTTCTAGAAGGTGACATTCGA ACAACATGCGCAGTTACTAACATCAGAAGTATGAAAAATCTCGTGCAAAC GGACATTACCAGTTTCGTCCACACATTTAAAACCACCAAGAGTATGGAGA TTTATCGAGAAGTTTTGTAGTGCTCTCgacttttgagcaaattttgTGGT AGCTAGTTGTATCCTGTGGTTCATCTTATTCACTAGTGCTGGGTTGGTTG TAAAGGATTTAAGTTCCGAGGTATTTGAAATCTGATACATTATTTAGCTC TCTATCGTTGATGTTAATAATACTCGAAGGGTAATCTGCTTCTGACGAAT GGTTGAGAATCATCAGTTCGGTTTTATTCACATTAATGGTTAACCTGAAT CTGGAGAAGACTGTATCCATGAGATGTGAAGCATTCTGAAGACCCAGTAT AGAAAGCAGAAACAAGGTAACAAGACAAGTACTNCTGGAGAAGACTGTAT CCATGAGATGTGAAGCATTCTGAAGACCCAGTATAGAAAGCAGAAAAAGT ACCAGGTGATCTGCATATCCACAACAACGTAGTGAGGAGGATCCCCATAG ATTTAATTTATCCACTCTCATCTTCAGTCGGTCAGAACGAGAAATTTAAT TTGGGTTTATTCGATGTTTATGAATGAAAAATTCAATGGTGTTACCTCCT TGTCTGACACCTGACGTTGTTGGGAATGTGATATCTTTGTACGTTAGAGA TGTAGAGCTGTAGAGAGTCTCAAGAATTCGAAACATGCGAGAGCTTCTTT CATTTGTGAAGCATAAATTGATGGATTTGATGAGTCACTTTTGCGGAATA TGATCAAATGCTGCACTGAGGTCAACAAAGAGAAGATATAACGGTTTTTG CTTTTGATTTGTGATTTGCTGCGttcttttaatctaataaataccGTCTG TTGTTCCACGGTTAGGACGAAAACCATACTACTCGTCAGAAAGTTGTGTT TCGTGGCAAGATTTCAATCTTAATAGGATGATACTTATGATTAATTTACA AACAGTTGACCCAATGCTAATGCTACGATATTTTGTTGGATCTCTTTTGG ATCTCTTCCCTTTCCAAATTGTTTTTAACTGTGAGTTGCCCCACGTATTT GGAAGATTTAAATTGTTCCATGAATAAAGAATCATTCTGTGTATAACTTC AAGCGTTATCGGAGTGTTGGAATGGGGAAGTAACTCAGGTTCTATGTTGT TGCAGGCTATATTTGGTTTAAGAGCTTGCTATTGCTTTATTGAAATGGGG CTTTTTTTATGggaaattttctatgtttggttttttgcacaaacccctgt aactgtGGGCGAGCAACCTGTTGccaagatgttggcttgaaaatgaaaat gaaagcactgaaaacgaaagtaaaatctgCCTGCAagaatcccgtaatct tgataaaGGAGTCTTAGTCTATACTGATGAGAAGAATCTGAAAGATCCAA GTTTGCAGGAAGCACCTGAAAAAACagtttgcttttttttcaaaaaacat acaaaacgGCTACATGTGGACATGAAAAGCTTTGTAAGGAAAAATATATT CAACTGtcattgacaaaaatacttatCCAAAACAATGAGTATGCTCAGGT ATGCTAGAAAGCACTTCCATAAAAATCAGCCTGATACCTTtgtctgaaat attgataaaaaagctGATACAATCAGTTTCGAAATAAGACATCCAGAGTG CGACCATCAAGatcgaaaataagaaaaagaagactatTCATGAGACTCAA AACATTTGAGACGCGGGCGGAAAAAAAGACCttacattgcgatcaaaaca aTCGAGGGGCATGTCCGCGGTATTCAACTTTAACAGCTCCAATGCAAATT TTTTAACTCCGGTTTGAAATAANGAGTTGCCCCACGTATTTGGAAGATTT AAATTGTTCCATGAATAAAGAATCATTCTGTGTATAACTTCAAGCGTTAT CGGAGTGTTGGAATGGGGAAGTAACTCAGGTTCTATGTTGTTGCAGGCTA TATTTGGTTTAAGAGCTTGCTATTGCTTTATTGAAATGGGGCTTTTTTTA TGggaaattttctatgtttggttttttgcacaaacccctgtaactgtGGG CGAGCAACCTGTTGccaagatgttggcttgaaaatgaaaatgaaagcact gaaaacgaaagtaaaatctgCCTGCAagaatcccgtaatcttgataaaGG AGTCTTAGTCTATACTGATGAGAAGAATCTGAAAGATCCAAGTTTGCAGG AAGCACCTGAAAAAACagtttgcttttttttcaaaaaacatacaaaacgG CTACATGTGGACATGAAAAGCTTTGTAAGGAAAAATATATTCAACTGtca ttgacaaaaatacttatCCAAAACAATGAGTATGCTCAGGTATGCTAGAA AGCACTTCCATAAAAATCAGCCTGATACCTTtgtctgaaatattgataaa aaagctGATACAATCAGTTTCGAAATAAGACATCCAGAGTGCGACCATCA AGatcgaaaataagaaaaagaagactatTCATGAGACTCAAAACATTTGA GACGCGGGCGGAAAAAAAGACCttacattgcgatcaaaacaaTCGAGGGG CATGTCCGCGGTATTCAACTTTAACAGCTCCAATGCAAATTTTTTAACTC CGGTTTGAAATAACAAAGGACACCGGTTTATTGAATCTCCCGATAGACAA AGAAAATTCCCACGTTTgtatcaaatgaagactctccatagacctCCACT TGcaaaccaaaaccaaaacaaacaaaaatgttgacttgaagaaaattatg aaaaaaacatgCCAAAGAGGAATGAAAGTGGgctattttaaaataaaaga aggagtgaaaataaatttaaaacaaatttatttttatttacgagtttttt tatcatcctgatcatTTCATATGACCTAGCCTGCAtgtagagcactgatt ttctcttttgATCGATCGGTCGCACACTGGTACTTTGGTCGGGAActgga gtttaaaaaaaaatcaaaacagacACGAAGAGCATGTGAAAAGTTGTCTA AACGCTGGTCGAAAAAAAGGATTACTATGAAAGTCAAATTGAATGTGATG TCAAGCCAATTCAGGTTCATCTGGAAATGCTCtctttttttggcaatttt tgccgttTTCGGAAAGACACattatttgatattttgttgaACACGTGGTA TAGATGATTTCTCTACCTAACTTGacatattgagcttcaaaaagtgcaaa aagtggtagcTCTTTNTTGATATCTCTACCTAACTTGacatattgagctt caaaaagtgcaaaaagtggacaaaatagctcttcctggctgaaaaacact attttaagggtcaatatcttgagttaggtacagaaatcacctatactcgc aatatatctctaatcctaattttttgagagcttttcaaTAATAAACAACA GGTTTctcttttctcaagctaaaattttcattaaattttgcccctatgat ttttgcctgaaatagtcatatttgtccaaaaaatacACCGAATTgtccga gaaaaaaaattgacatccattttattttgattcctctaccccttagcttt ccaaaaatgtataacataagtgctttgactaaaaaagtcgcaCAACCTCA AAAAGTCAAACAAATTTCCCTTTACTATGAGGCGCTATCTCTGGAATTAA ATAAGAGATCTTGGTTTTTGGCTGATAATCTGGTTGCTGCAAGTTACGGA TCagtcattttgttttcaaatggctatcgctaatgagctagATTtagcag ttttttttaaaacgtGAGAAAGAAagtactttagtttgtcacACATTAGC CATAACAAAAAAATCTATGGACCATTAGGTAGGCTCCCTTAAAAAGTCCA TTATAGTCAAAACATGTATTAGCTTGATATCAGCTTTTAGCcccattttt tgaccatttcgaaatctttttagaaagtcTTGTTTTATATCAGAAAGTGA ATCACTAAACATAATCATTTTGACCACTGGTTTGGTTTATATATAGCCAT ATATTTAATTTATAATATCTGGGGGTTGGGTAGCTATTGCTGAATAAGTT AACTTCTCAAAATTATGTTGTAGAGAAGCTGAGAGTAGTCAAGAAGACTT CATTTTTAACCTTGGGGTACATTTCACACTAAACTTGTACTTATGACAAC AATAACGAATTAAAGAACAAGGCTTAGCCTGGAATGACGTAGAGAAATTG AAAGTAGAAAAAATGGTTTTGAAATTCATATGCCCTCAGTTGCCCATTAT AGAACAGAACTCGAATAAGAACAGGATCAGGATAAGAAAAATCTATTAGA GGCTTAAAGTAGCAACAACTAAGCCCCCAGCCAAAGAAATTGACTCTGAC TCTATTCTGTTATACTATTGACTAGAGAGCCAGATTACAAACCTTCCAAT TGTGTTatgaaaccaaaaaaatgtttgtttatcATCTCTGAAATATCCTT TGTCTTTTGTCGTGATATAGAGAATTCCAAAATGTTATAATTGTTTCTTG ACTGAGGTTTCTATACTATGGTAATGAAAATCTACAACTGTCGAATTGTC AATCTTTTCAAGTTTTAGAACATCATCACAAGGGTAAAGGGATCTGgttt aaattctttaaaacaCATCACTTCAATTGttacgtttatttatttatttg tttatttatttatttatctaattatttatttatttatttaaatatttatt tatttatttatttacttatttatttatttatttatttatttatctattta tttatttatttatttaaatatttatttatttatttatttacttatttatt tatttatttatttatttatctatttatttatttatttatttaaatattta tttatttatttatttacttatttatttatttatttatttatttatctatt tatttatttatttatttaaatatttatttatttatttatttacttattta tttatttatttatttatttatctatttatttatttatttatttaaatatt tatttatttatttatttacttatttatttatttatttatttatttatcta tttatttatttatttatttaaatatttatttatttatttatttacttatt tatttatttatttatttatttatctatttatttatttatttatttaaata tttatttatttatttatttacttatttatttatttatttatttatttagt tatTTAGTTAGTTATTTAGTTAtttactagacggttcccgtcgtcgcaaa cgccggttaacggttttgcttgcacatcaaaagcctttaaaatacgaTAA TGTGCGttgacatcgttttggcttaaaatgccgaatacaataataaaaat tatacttctaaactttctacattagtcaaaattttgtgtctgtaagcctc gattatatgtctttttaagataacggaagtttgtgttcaatgaaatgcca tagtgaccctgtcaaaattataGAGGGTATCCGTCGTTGCAGACGCtcaa aggtgtctgaggtggtgagagggttgcttNTCATCGTCAAAGAAAGCAAG CTTGAGAAGgcccgtgaaacttttgaaggTACCGACATCAAACTGACAAC CTCTGGACGAAAATACCTTGGTGGCTTCATTGGAAGAACAGAAGGCAAAG ATGAATACGTGAACGGGCTTGTCCAACAGTGGTGCTCTCAGCTAAAAGTA CTGTGTGATATTGCCAAGTCCGAACCANGCTCGCGCTTTGCGgttgagca ctgaaggttttcccgtttgttggcttcacatgaggacagcttaagaccgg cgcatatgcaatgcaaccaagattgaaacctttttaaataatgttagacg gagtttaatcatcaaacaacaatgttggattttgttgcgtgtgttgatat aaaataatttgaaatcgtgcaacaaaaatgccacacctttttatttgaaa ctttgtgacgtcgcagtactttttcatgaaattgacgtcagaactttttt cgtttacaaatagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGGAGGTTTCATCCAC CAACGCCATGACGAGATGAGAAACCTCTTGGCCAACCTCCTTTCACAAGT ACACACTGACGTCTCCATCGAACCTCACCTACAATCTCTAACTGGAGAAT CACTACCAAACAGCTCCAACAAAACAGATGAAGCCCGACTTGACGTGTCA GCCAGAAGTTTTTGGCAAAGGGGACAACTTGCATTCTTTGACGTAAGGAT CACAAATCCGTTCGCAAATAGTCACCTTAACCAGAAACTTCAAAACACAT TCCAATCGAACGAACAGGAGAAAAAGCGGAAGTACAACAACCGAATCATC ACAGTCGAGCATGGTTCGTTCAGCCCGTTCGTTATGTCTCCGTACGGAGG ACAAGAGAAACGGAAATGATCATCACGACCCTTGCAAAGAAGCTCTCAGA CAAAAAAGACATTGAATTTGGTATCATGTTGAATTGGTTGAGAACTAAGC TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGATCAG CTATCCTATGCTTACGTGGATCGAGAACTGTTAGGAAATTGAACATTGAT ATGAATGAGATTGAAATTCATGAATCTACTAGGAGAAATTTTTAGTCAAC CTCTCTTATTATTCGTcgattttgagattatttttttcagacttttGCAT TCTCGTTAACCCCTTGTTTTGCGCCCGGCGTGACCGCAAGGTTATGCTAC TATCCTTATGATGTGGATTTGTGATACTTGATTTGTTTGCCtcttattat tcgtttttaacTAAGTTAGTCTTATAATATTTAGATAAATATTAttttac aaatagcagtgtagagtcttctctaaaaaaaatttacaaatagcagtgta gagtcttctctaatccgagttttctacgcttgtcaaacttagcgcgagac tttttgtatcaaaggtggataggttttccagccgcggcgttcaaatttct CTGCTTTTTTTCAGGGTACATAACGGATGTGATTGAAGATGCTCGAGTGT ATAGTCAACATGCAAACCGTAAAAATTTGAACTTAGACGATGTGAAACTT GCGGTCACTCAAAAGTTGGACCACTCTTTTACCTCACCTCCTCCAAGAGA AGtaagttttgtaattttgatcgaattagagagcctGGAATCAGCTGAAA TAAATGTGACTTTATGGCAGTCGTGTAAACAGTATCTTAAAGGTTtcgtt ttgattgaaaggtctgataATGCTGATGTAGTAAGaacaagtgcgacaag attagagaaaggttttgaaaaaatgaaaNTGATGATGTAGTAAGaacaag tgcgacaagattagaaaaaggttttgaaaaaatgaaaatatatacattga ataaaaaacaattctcaaacaaagggacttttactgatactctttcgaat gtttttatgtttatgataaatagaacgttttctatcttataatcaaaaca ttcgattgtaaaaatgctcgaaatcaactttgctattttttttgcttaca aaatcaATAGAATGCGAGGTCACATCTCGAAAAaactttcgatctttcac ttgtttgcaggatatcgtTAATCGCTTTGATTTATATGACTCAGCATGAA GACACTGCCCaaaataagctccttttattcccgtagaaaacctttaaagg ACTCAACTTTCTAGGCCATGTTTTAAGCTTTCAATGTACTATTGTGCTAA AATATAATGATGTTTAATCTACTTTTTACTCTGTGGCGatttgttttaaa tattgaaaCACGTATAAGATTATTTAAGTGGTGTAATTAATTGAGATCAA TTCAAATAAAATCTCTGTTTCTTCTTTATAGTTCTTGTTGGAGATTGCAC GCTCCAAGAacaattcaaataaaatgtCTGTTTCTTCTTTATAGTTCTTG TTGGAGATTGCACGCTCCAAGAacaattcaaataaaatgtCTGTTTCTTC TTTATAGTTCTTGTTGGAGATTGCACGCTCCAAGAacaattcaaataaaa tgtCTGTTTCTTCTTTATAGTTCTTGTTGGAGATTGCACGCTCCAAGAac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029392XLOC_029392Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045989-exon-scaffold_105-1491911889:265339..265535TCONS_00045989-exon-scaffold_105-1491911889:265339..265535Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1510915933:265339..265535TCONS_00045989-exon-scaffold_105-1510915933:265339..265535Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1575043694:265339..265535TCONS_00045989-exon-scaffold_105-1575043694:265339..265535Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1491911889:283803..283939TCONS_00045989-exon-scaffold_105-1491911889:283803..283939Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1510915933:283803..283939TCONS_00045989-exon-scaffold_105-1510915933:283803..283939Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1575043694:283803..283939TCONS_00045989-exon-scaffold_105-1575043694:283803..283939Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1491911889:284859..284888TCONS_00045989-exon-scaffold_105-1491911889:284859..284888Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1510915933:284859..284888TCONS_00045989-exon-scaffold_105-1510915933:284859..284888Clytia hemisphaericaexon
TCONS_00045989-exon-scaffold_105-1575043694:284859..284888TCONS_00045989-exon-scaffold_105-1575043694:284859..284888Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:265339..284888 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.3155 14.6508 13.4331 12.2829 5.67608 5.068 6.81731 5.21909 5.03095 4.68535 2.73121 5.66563 3.75492 4.10153 3.34313 5.18007 3.5272 4.02621 2.06141 2.9068 4.15557 4.0119 8.42721 6.00465 4.90812 3.58229 2.44107 2.661 4.36822 4.45772
Blast
BLAST of TCONS_00045989 vs. Swiss-Prot (Human)
Match: TAF9B (Transcription initiation factor TFIID subunit 9B OS=Homo sapiens GN=TAF9B PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 7.608e-41
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 2
Query:   71 EGSNQPIKTTPKEALVMASILKEMGVNEYEPRVINQMIEFSYRYITDVIEDARVYSQHANRKNLNLDDVKLAVTQKLDHSFTSPPPREFLLEIARSKN 364
             G   P K  P++ALVMA ILK+MG+ EYEPRVINQM+EF++RY+T +++DA++YS HA + N++ DDV+LA+  + D SFTSPPPR+FLL+IAR KN
Sbjct:    3 SGKMAPPKNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKN 100          
The following BLAST results are available for this feature:
BLAST of TCONS_00045989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAF9B7.608e-4159.18Transcription initiation factor TFIID subunit 9B O... [more]
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