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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045965 ID=TCONS_00045965|Name=TCONS_00045965|organism=Clytia hemisphaerica|type=transcript|length=882bp
TGTTGTTCAATTGTCTGTTCGTATATTTCGTGAAACACATAATTTACACA
TAAAAGACTACTTTATAATCGGCTTTCTGTAGGCCATATGCATCCCCAAG
GTAGTACTGTATTTGCCGATAATATAATACCCTTTTCACATTAAGAGCAC
ATTATACTATGACGATAAAAATGAGGACTGATTGAGAAATCATCACTAAA
ACACCAAATATAAAGTTCGTTCGGTTGAATAATTGTAAGATTTAAGTTTC
GAAAAGTCGGAAATTAATTCCAAAGAGAAGGTGATTCATTATTCCCTAAA
AGACAACAAGGCGAGCAAGCAAGCAAAGCGAGCTTTTGAGAGCTTTTTTA
TGTTCTAACGAGACAGAAGTCTGTCTGACACTGAACAGTGTACTTAAAAC
ACTTCTTGAATAAAGGGCGTTcacaaaatttataaattacAATAATAAAG
ATAATAAATTTTAAGTTAGAGATAAAAGATGACAAATTATCAAATACTGC
ATTGGTTGACCAAAATAAACTAATCGttcgtttttaaaaataagagtcta
ggtaatgttctagttggtgagttggggagttggggagttgctagtttcga
gttggggagttcgtaaaactttacggcgaccgaaaattttctaatttaaa
caaatgtagcccaaaagtacaaatttcaaattagccagtaccaaacataa
tattgactttaagatcatgaaaatggtaaggtgctggcgagcaaagccaa
aatactaAGTACTGTTATGTGATTGTCATAATGCTGACAACATGACCtgt
tcttgtaaaattattgacaaaatctttaaatacaatgattgtcaaacaaa
ttccccaaaaaaaattgatcatactgcaagtg Run BLAST on NCBI transcript from alignment at scaffold_104:164833..165714 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045965 ID=TCONS_00045965|Name=TCONS_00045965|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at scaffold_104:164833..165714 (Clytia hemisphaerica)
cacttgcagtatgatcaattttttttggggaatttgtttgacaatcattg
tatttaaagattttgtcaataattttacaagaacaGGTCATGTTGTCAGC
ATTATGACAATCACATAACAGTACTtagtattttggctttgctcgccagc
accttaccattttcatgatcttaaagtcaatattatgtttggtactggct
aatttgaaatttgtacttttgggctacatttgtttaaattagaaaatttt
cggtcgccgtaaagttttacgaactccccaactcgaaactagcaactccc
caactccccaactcaccaactagaacattacctagactcttatttttaaa
aacgaaCGATTAGTTTATTTTGGTCAACCAATGCAGTATTTGATAATTTG
TCATCTTTTATCTCTAACTTAAAATTTATTATCTTTATTATTgtaattta
taaattttgtgAACGCCCTTTATTCAAGAAGTGTTTTAAGTACACTGTTC
AGTGTCAGACAGACTTCTGTCTCGTTAGAACATAAAAAAGCTCTCAAAAG
CTCGCTTTGCTTGCTTGCTCGCCTTGTTGTCTTTTAGGGAATAATGAATC
ACCTTCTCTTTGGAATTAATTTCCGACTTTTCGAAACTTAAATCTTACAA
TTATTCAACCGAACGAACTTTATATTTGGTGTTTTAGTGATGATTTCTCA
ATCAGTCCTCATTTTTATCGTCATAGTATAATGTGCTCTTAATGTGAAAA
GGGTATTATATTATCGGCAAATACAGTACTACCTTGGGGATGCATATGGC
CTACAGAAAGCCGATTATAAAGTAGTCTTTTATGTGTAAATTATGTGTTT
CACGAAATATACGAACAGACAATTGAACAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045965-exon-scaffold_104-1491911889:164833..165714 | TCONS_00045965-exon-scaffold_104-1491911889:164833..165714 | Clytia hemisphaerica | exon |
| TCONS_00045965-exon-scaffold_104-1510915933:164833..165714 | TCONS_00045965-exon-scaffold_104-1510915933:164833..165714 | Clytia hemisphaerica | exon |
| TCONS_00045965-exon-scaffold_104-1575043694:164833..165714 | TCONS_00045965-exon-scaffold_104-1575043694:164833..165714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_104 | supercontig | scaffold_104:164833..165714 . |
Blast
The following BLAST results are available for this feature:
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