TCONS_00045946 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045946
Unique NameTCONS_00045946
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2648

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045946 ID=TCONS_00045946|Name=TCONS_00045946|organism=Clytia hemisphaerica|type=transcript|length=2648bp
TCCGTTTCCTCGTGGACGTCGAGTTATATTTCGGACGTGTCCACTGATGA
CCAGCAGTTGGACTCTGAAAATTCCGACCCCAGTTTGAATTCTAGTTATG
CTGATGTTTTTGAAGCCAGTGGTATTGTGATTCGTGATTATGAAGGCTCA
TTTTCGAAAAGTCCCTTACATCAAAATGCAGTGACGTACAATTTGAACAA
ATGCAAATCAAACGTTGTCATTCCATATTTCAAGCTTCTATGTCTGATTG
GTTGGCGTCCCTTTGGATACAGATATGATTGTTGTCCAGCGTGGTTGATC
AATTTTTGGAATTATTTgtacactttcattttcttttgtattcttATATT
TTGGTACGTTATTCGTGTCTTAACTTGTAATGGACAGTTGGTTGTGGATA
AACCTGCACATATCATTAAACCTTCTgtgACCCCAATTACTCCAACGTAT
GGACCAAACGTCACTTTTATCAATTGGACCACGACAAACTCTTCTAACTT
TTTCAACGGGTCCAACCAACAAGAACTCCAGATTCGAACCTGTAATCATA
TCTTTGGCACCTACGTCATTCCCAATTTCTTGCATTTTTTCGCATTCCTG
ATTGGGTTTTATCATTTTCGCGTTCAAGAACATGAAGGCTTATACGCTCT
CATGGAAAAGGTATATCTTCAAAGCCACaacccaagcaaaatgaccaaAA
GGTTGAGattatACTTATTTCTTGGTGTATTTTGGTTGATTACATGTCTG
GGAACCATGATTCATTATTTCTTCGCTTTCGGTCTTCATATTGGAACCGG
AATTCCCAAGTCAAGACCAATTTTAATGTATTCCATGGCCACTCTGATCA
CTGTTTCCAACTTACTATCGAACTGTGTCAACTTGGCTGCAGCATTAAGT
TATTGTGGACAGTGTGATTTACTGACCTATTACATCGATGATGTGGCTGA
GAGGCTGGAAGAAAAGTCCACAGAACTGAAAACTGCCATGAAGGAAATTT
TGGAGATCAAACGAAACTTCCATCGTCTAAATGGATCGCTATCAATCAGT
GTTTCTTTACTTATCTTTGATGCACTCATCGTTCTTATATTAAaTTCAGT
GCTTCTCTTTCAATTTTACAACGACATCACGTACGTTTGGTTATATCGTC
TGGTGACCGTCTTCGAGTTGTCCCTTTTTTGTTGTTTCGTCTTTGTTTTG
GCTGGACGTGCGACATCTCGATCCTCGATTCTTCTCGATAAAGCATTATC
AATTCGTGTATTTGGTTTTCAATCGCACACTCAACTCGATATCGATTCGT
TCNCAGGCTGGACGTGCGACGTCTCGATCCTCGATTCTTCTCGATAAAGC
ATTATCGATTCGTGTATTCGGTTTTCAATCGCATACTCAACTCGATATCG
ATTCCTTCttaaatttcattcataaaGTAGAATTACAGGCGGAGATTTTT
ACGATTCCAATGAAACCAAGATACATGTGGGGTGCTTTGTTTATCGCTGT
CCAAGTGATAATTCTCATCTCGCAAACAGGTGGCTTCAATAATGATAACA
GTAAATGGCTTTGATGTGCATAAAGAAATCAAATGATTCTGACTCCACGT
TGAACTAACATTACATTAAATTAGAATTGGGTCCGAAACAAACTCTCTAA
TGGTCTTGACGATACAATCTCCAATGCAGATGATACTAAAATAGGAGATA
TTTCTAACATCGTAGGCGACGATGgtttttaaaagcattttggAGACATT
CTTTTCATTACCGTCCACTCTTAAAGAGTTGATTTCCTCATACCTACTTA
CAGACATTTTACAAAGTGAAGAAGGAATTGGGAAAAGTTTTCTGGCAATT
GTCGAAAATCTTCCTCGACCGATATCTGAGTTATtccttatttttgattt
ttcattaagtgaaacaatattacatatttcaATGAATATTTTTATGACAA
CAGATAAAGCATATCCAAAAAGTTTAATATATTGCGATAGAatttataaa
tataaacaaaGTTGTAAATATTTATCTAAGCAGTTGTTACGTACGTATTC
CCAAATGTTACAGTTCAGTTTTATAGTTATACTGAAAGGATTTTGTAGAG
AGGTTTTCAAGTTGACTAACTTATGTAACTTCCGCCATCACTTAAGTAAA
CGTTGGATTTGCGGCAGGTTTTCCTGAAGTTATGTAAACTTTGACAAACC
TGAGACAATAAAAATCTTTAATCAATTATCCAACAGCGTCTGGAATCAAC
AGGGTATAAAAACTGTTTGTTCAATCAAGAGATAATCAATTTCCAAGGTC
AATAAtagaatttggaaaaaaaatcaaagattagATTATAAAAGTTTAGT
ctatttttctagattttatacatttttttgtaaaagtattTCCCgtattt
ccatatttcttttctttgtacATAACATTATCGAATTCCTCAACCTTGCT
CAAAACCATTATCTAATCGTGGTCTAGAAGCTATTTTTTATGTAAaacga
aaattttctcaaagtgTATAATATGatgcaaaaaatatatttcttaaaTA
CTCAAATCATCACCTGTGTGATTGCTCTTTTTTgaacctaccccggtgga
ggtcctataaattaacctttgtccgttcgtccgttcgttcgttattag
Run BLAST on NCBI

transcript from alignment at scaffold_104:247127..258028+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045946 ID=TCONS_00045946|Name=TCONS_00045946|organism=Clytia hemisphaerica|type=transcript|length=10902bp|location=Sequence derived from alignment at scaffold_104:247127..258028+ (Clytia hemisphaerica)
TCCGTTTCCTCGTGGACGTCGAGTTATATTTCGGACGTGTCCACTGATGA
CCAGCAGTTGGACTCTGAAAAGTATGAATAACCTTCGGTATAATTTCCCT
TTAATCTTTATTCGTTTGTCTTCTCCTCGTCAATTGGTCAATTAAAAGTT
TCGTGTCCAGCTTTAAAGGACTAACATAAACTGATAGTGAATTCCCTTCT
TTGTGATCGGAGGACAGCTTGAAAGTAAACCTAGGGTAAAGCTACGAgac
ccggaattcccgagttgttttttccgagttaaaaaaaccgagttaaaaaa
aacccgagttatcccgagttatgacgtcatttttggaatttagtgacgtc
atttttcatttcataactcggtttattttgcttcctttaactttccgagt
tattttccatttttaaactcgggaatttttgcttcctctAACAtaccgag
ttattttccatttttaaactcgggaatttttgcttcctctAACAtaccga
gttattttccatttttaaactcgggaatttttgcttcctctAACAtaccg
agttattttccatttttaaactcgggaatttttgcttcctctAACAtacc
gagttattttccatttttaaactcgggaatttttgcttcctctaacattc
cgagttattttccattttttaactcgggaattttttcttcctttagcttt
ccgagttatttttgaatttttaactcgggaattttatgCTTCCtgtagct
ttccgagttattttccattttttctggCTTGTAAAAACAGCCAATAGTTC
CAATAAGGGTCACAAAATCCCGAAATAATCAgttttttcctcaatttttg
cggcacatacccgtcagctcgcaaccctagtatcccCGGGGCTTTTATAA
AGCCGAACGGGTCTTACACGATCCCTCCATGTTTTTCAATAACACAGGGA
TGTGCCAAGCCAAGGGCGACTTTTCTGCttctaaaaattttctcacgAAA
ATTTAGTGTTCATTCATTCGCTTACGTTACGTTTATTCTTTGTACGTGTG
ACAACGAGtgacaaaaaacataaaaatctaCGAATAGTCTGTGAAATGAT
TGATTCAAGAATCGTTGGTgattcattcaatttttttacagcgaaggggg
aaggacTCAGTGAATTTTTCTGAGAATCTTGTCATGTCacttacagtatt
ctttaatgaaatagggtggaaatatgaattttgaaatagctttatctCAT
TACTTGCCTGctgtattttttgagattttatttatgctgtaatatttttg
aagggcttacactttgtttatctagcaggttttaataaaacctgctagat
aaaaacttcagttcttgcttttcaattattcacttgtttgttgattattc
attttattAAGCAAGTTAAGGTTTTCTAGTTGGTAATGGATGGTTATGTC
TTTGATTTAGGTTGGTATGGGATCAATAGATTAAAactggtgtttttttt
tatgaagaaaaataactcggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNcgagttaaaaaatggaaaataactcggaaagttaa
aggaagcaaaaattcccgagttaaaaaatggaaaataactcggaaagtta
aaggaagcaaaataaaccaagttatgaaatgaaaaatgacgtcactaaat
tccaaaaatgacgtcataactcgggacaactcgggttttttttaactcgg
tttttttaactcagaaaaaataactcgggaattccgggcctctaAAGCTA
CTCAGTAAATAGTATAGTAGCTTGGGCCGTGTATATCTGCGAAACTTTAC
CACATCCTTTGGCTCTACCAAAAGACATCATGTGAATTTACTTTCGTTTA
ATTTTATGAAGCTAATACATGAATCAGAGGTCTGTGACTCTCTAAAACTA
TGATCTTTTTAGTATAACTTTTTTAAGTAAATTTTTCAGGTGGATGGGTG
CCTGGGTGACTAACTAATTTACAGTGAGTGTAAGAGTTTTCAGTCGAAAA
TTTGGCTCctataataataattttaaatttttttcatcgTTTAGTTCCGA
CCCCAGTTTGAATTCTAGTTATGCTGATGTTTTTGAAGCCAGTGGTATTG
TGGTAAGCTATTTACgtgttttctataagaacatgcaaaatttattaaaa
tgttcttattttatttttttagtacATCTGGGCAATTCCCTAAGTCACCT
TTGTTATTTTAGAGtgcacaaagccttaaaatgttcataacttgtttttg
atattttggccattaaaGCCGCACGGGTGCTctgatatagtttgttctca
taatcCTGGTTTTTCTTAGTGTCAAACATCCCATCCTTTCAATTTGAAAT
GTGAAAAGGGCTTGTAACTTACTTACCTTTAGTACCCCTTAGTTAAGGGC
TAAACGTTAGTCGCTGGACAATGACATGCACGGCTGCGGTTCTTGGTGCC
AGTCAGTTAAATCCATTGTCTTGGCTGTTGTCGATCAATGGCTTTATCGA
AATTACGGATTAGAAAGAAAAGTAGGTTTCGAGGGAAAAAAGTGtgcaaa
gttcttccgtcttgTACGGGTTTACGTCTGATCGAAGtacaaaaaagaat
ttaacaaacttaaaattataaaatttgaagaattttgtcTAATGTGTTGT
TCAAAATCCATTTCCGTCTGAGCCGAATAACTTTGCTTTGACCATTGGGA
AAAGAGGCGATCTTCGTTCATGAATGAAGATATACAATCTCAAATAGGTA
CCTTGAGTCGTTTAAGATTTCTGTGTGATTTGCTTTCTTTCAGATTCGTG
ATTATGAAGGCTCATTTTCGAAAAGTCCCTTACATCAAAATGCAGTGACG
TACAATTTGAACAAATGCAAATCAAACGTTGTCATTCCATATTTCAAGCT
TCTATGTCTGGTAAGTAGGAATAGACGAGGACAAATCTTCTCCTAAAACC
ACTGAAAATAAAAGGCCCTTAAAATTGTATACCGAACTTActgttctaca
tctgcaatttgagctttacatagctcatttgacgtcaatcgttACTCTGA
TTATCAGCCGGTTTGAGAGAGAGTGATATACGAGTAAAGGTAGAGTCTAT
TACCATATTTCCCTTACACCCTGCCTGGTAGTGCTTGGGATTtgaacaca
gtccattgcggtgcaagtctgtgatcgaaactttcacactaccaatcggc
agggtgttagggaaatatggtgataaaCTCTCTGTccttaaaattgtttt
tttttgtgatctATAGGAAAGATTTTACAGAGATTTCTATACAAAAgtta
atttaatttcaattttcggAGTTTGTGGTGCTCAAGTAGAAACAAATCTC
TCATAAATCATATCCAAGACTTAAGAAAAGAGGCTGGTAGCGATAAGGGA
GTGAGTCTATGCACTTTTTTTGCATATTTTAAACACGAGTAGTTGAAAGT
GCACAGTTTTAGTTGTCAACTCTACTTCAGCTTAGACCAATCTAACCAAT
TTAAGCTTTTCATATGCTACCGGTCGAGCTAGCCGACCCGCGAACTAGAA
GTAGAGTTGCTACAAACTATTTTCGTTCTATGCTGTCTTTTTTAGATATG
TTGACGTCCCTTTGGGTGCAGATATGATTGCTGTTTAACCTTTTCTTTGA
ATGTGTGGTTTTAAGACTCTCAATTATTAATAAACAAACTAACCAGACTA
GCTTTTCATGTGCTATCGGCCGACCTTCTTGACCCGTGAACCAGGACCAA
AGTTTCAAGATATATCTGTTATCTTTTTAGATTGGTTGGCGTCCCTTTGG
ATACAGATATGATTGTTGTCCAGCGTGGTTGATCAATTTTTGGAATTATT
TgtacactttcattttcttttgtattcttATATTTTGGTACGTTATTCGT
GTCTTAACTTGTAATGGACAGTTGGTTGTGGATAAACCTGCACATATCAT
TAAACCTTCTgtggtaagattttttttcactgtTATGCTAACTCTCTTGT
CACTTAAATTATTCATTACAACAATTAAGCCACCGCCTAAATCATCGTCT
CAGGTTCTAATTTTCGTTTGCAATGTGTCTAAAGGTAGAGCTTTTGGATA
CGGTGCGACCGGAAAAGTGGTTCTTGATGCCTCTGCTTATTGTTCACTGA
TTAAAAAGAAAGTCCTAAGAAGTGGGGCAATCCAGGGATAAAGTTATAGA
AATACTTATCAACTGAAAACagccatttttagaaaattcataCATATAAC
AAAACGGGTGCTATTTTAGGCTATTTATTAGACACACAAAATTCCAAGTC
TTATCTATCGGCCCTTTAGGGGGTTGGGTCGTAATATACAATGGACCTAA
CATCAAATTTTCTTGTTTCAGACCCCAATTACTCCAACGTATGGACCAAA
CGTCACTTTTATCAATTGGACCACGACAAACTCTTCTAACTTTTTCAACG
GGTCCAACCAACAAGAACTCCAGATTCGAACCTGTAATCATATCTTTGGC
ACCTACGTCATTCCCAATTTCTTGCATTTTTTCGCATTCCTGATTGGGTT
TTATCATTTTCGCGTTCAAGAACATGAAGGCTTATACGCTCTCATGGAAA
AGGTGAGAgatgaaagaatatttcttcCCTtatgtcttcaaaaaaattag
aattttaatTTCGAGAGAAGAATTGTTGGAAAGTCTCTCCAAGGTTAgaa
aacttttcgaaaattttctttctaaagATTCTTCGCTTCGTTTCACCagg
ggctgagctagttcctcTATGTAGATATACAATGCTGTCATTTTTTCTTC
TGATCACGGTTGAACATCTAATTAGCGGGCACCATCTGGAGACaagttag
tgtccgctaatttaAAGACTTTAAACTAATGGGCTCAAATTTCAGAACTA
CACTTTACCAATGGGAAATTATTCCATGGCTAGCCACTATAAATATGTTT
TATTATTGTTTGagatatattttgataatgtttCGATAATGCactattta
taaaagttttccTTCTATCGAAGATAGATTAGGTACACTTTTTCTATTAT
AATATTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAtca
taacattacatcattatatatcaacggaaagcttagactctctactttct
ttttctttatttttcaacgatCAGAAAGCAAGCCAATTAAAGATATTGCC
GGAGGAAAACATGCCTATCAAATTGCGTATATGTACGACATTCGGAACGT
CTCAAGgacgtatatgtacggcattcgggtccaaaaggttaaataaaaaa
gtaattattgaataattgaataaaaaactcttaaagaaagaaatttttgc
ggcgACTCTGACGGATTTTGCGGAtccccaaaatattttcaaaacaacca
TACCACCGACGGGTGGTTTCTACGGTGATTTATAGTCGTTGATCTTTCAA
ATCAAACGTGAAATTTTCTCCTAGGTATATCTTCAAAGCCACaacccaag
caaaatgaccaaAAGGTTGAGGTAAGATCTTTTTATTTCGCATCACATCC
AAGCTAAAACAAGACAAGAAGCCCAGTGACTCAAAAAAGTAACAAGGCGC
CATTTCTTCTAAAATGagcttgaattgacaaagcgctgctttttcaaaaa
caaactaCAGCACCACGGACAGAAAATCTCTTAAAAGTTCACGTGAATGA
GTGAATTGTGAATCGTGATTGTGCGAATTGGGTCTGCTGGGCGTGGGCCC
TTAACTAAACATTGAATTAACATTCGAGACTTTATTACTGATACAAATCA
TTCGTCAAATCAATTTTCACTCCTCATCTTCAAAATGCACCTTGAAAGAA
gacatttcttttcattttcagattatACTTATTTCTTGGTGTATTTTGGT
TGATTACATGTCTGGGAACCATGATTCATTATTTCTTCGCTTTCGGTCTT
CATATTGGAACCGGAATTCCCAAGTCAAGACCAATGTAAGTCTATGATAT
tcgatacatgtttttttcttttataagcattgcacttataagcatatcta
gacTCAAAAAATCTAGAcgcaaaaatttaagcatatgctaaaaTGCttga
ttttggctgtttttatTGCTGGGATTTTACTGCTGGAATTTCCCTAAAGT
TTTGCTTGGGATAAAAGCATCCTTAcgagcatttttcagccttgtcaAGG
CCTCAACGTAAGCATCTTCGAGCctgttttctaatttttgtagGCTTATA
AAAATACATGTGTTTGATTCTTCGATGAAAACCCCGAATAACCAAGCTCT
TATGTTACTTTAAGTGATAttcatttaaaatatttaatattaTCCAATAG
AGGAATTAAAAATTATTATGATTACGCACACTGCCTAGTTTTCTTTGCTA
AAACTACTAACGCGTTGGACACtagcttttagaaaaaagtcTTTGATAAT
CAGGGGATAATCATCTGTTTTTGCCATACAATATTATGTTGATCTCAATT
AGCTTACTCTACTAAAACTCATTATTATCAACTGATTTCTAACACATCTT
TATCAACTCTTAAAACATGAGAGGGGTCTTGGTTAGATTTTACATATGAT
TTTACCAGGAAGGAGTAACGTCATCAAAATGTCTGTATCTGTAAGaaaat
agcgagattatgtatcggagatattctacggctacggttgcggggctgcc
cattgcgggtcgtcaccaaaggcgacatgtcgttgtctactttgctctgt
acgggaaaaacatcaaaacaccgtataagcaaagtcgacataatgccgta
cgtcaaatatcgaacttgctttcacccgccattacttgccttactcgcca
tttccctcgccgctttaaccgtagccgtagagaattccagatacataatc
tcgctaatcATAGCAGAAACTTcagatatttttttatcaatttgacgtca
atcaaTCCTGGCAAACTCGAACGCAATCTCCTCACACTTTAAGGGTTGAC
AGTTGTTTCCATCTTACATTCATACACGAGAAGACTTCGATTTACAAGAA
aggagtgacgtcatcaatatgTGTGAATAATAAGTTATGCTCTATTTGAT
CTTAAAATTGGCTCAGTTGTTATTTATAGTCAAGGACTATAATGTGTGGA
TTTGTAAGAAAATCAATGCAGTAACTTCAGATATTTGATTTGACGTCAAT
CTTCCTagcaaactcgaacccagtctccTTACAGGGAGAGGGCTGACAGT
TGCATCTTCTTCTATTCATAGTTTAATGTATTCCATGGCCACTCTGATCA
CTGTTTCCAACTTACTATCGAACTGTGTCAACTTGGCTGCAGCATTAAGT
TATTGTGGACAGTGTGATTTACTGACCTATTACATCGATGATGTGGCTGA
GAGGCTGGAAGAAAAGTCCACAGAACTGAAAACTGCCATGAAGGTATGTT
TCATACTTAATAACATTATGTAACATTGTGCAaaccttttatttttaaag
ctaagttgacggtatttaagaGGAAGTCGGAATCTTTGGGAAATTTCAAC
TGCCAACTTTCTGCCCGCTTTTTGCTTACTGTAGTAATTAGAAAAGAAAG
GGTAGAAAGTTGTCCGTCTAAACTAAAACTTAATTACGCTATTAGTAAAA
GAGATTGATTTTCTATCACAGGAAATTTTGGAGATCAAACGAAACTTCCA
TCGTCTAAATGGATCGCTATCAATCAGTGTTTCTTTACTTATCTTTGATG
CACTCATCGTTCTTATATTAAGTAAGTAGTAAACCATGTGCTGCCATGTG
TCGTGTTTTTCGTATACAActgaattgaatattttttacctaGGAGAGAT
TCTTAACTCTTGGACTTCCCTGCTCTGGGGTACTAGGGTTAAAGTCGAGC
ATGTGCGGACCGGAACTCTgattaaccaagtaaattaaaagaaaatctag
cacaaaaatggctttaggttgaaaaataatcgcaatttagggtaatttca
agcatgtttttgatgatatcactcaaaaacaggggtggtacctggaaatc
ttttctgaaaacagttactaccaaggtcaATAACAAGGCTAATATCAAAG
AAATCTCTTAGCAATGTAAACTTTaatatcattttttgtttcagaTTCAG
TGCTTCTCTTTCAATTTTACAACGACATCACGTACGTTTGGTTATATCGT
CTGGTGACCGTCTTCGAGTTGTCCCTTTTTTGTTGTTTCGTCTTTGTTTT
GGTAAGTATCTTACGTGGATTATTTTCTCGAGGATTATATTTTGCGAGTT
TCACGATTTTTAACGAGAATTCACGAAATTTAATGCtcgccaaaattttc
aaaccagtatttttgacaaaaaccctagatttttgccaaaaccctTAGAA
AATTAAATTCAGTGGGTATTAACACACCCTGGTAAACTTCAGCGAGAGGG
TTAAAGGATCAAATCCAAACCACGAATTTCTggttattttcaaatcaatt
atCAATTATGCTCACTTTTTCAAACATGGTGAATTATTTCTTTACTCTTG
TATTTTTTCAACAACAGGCTGGACGTGCGACATCTCGATCCTCGATTCTT
CTCGATAAAGCATTATCAATTCGTGTATTTGGTTTTCAATCGCACACTCA
ACTCGATATCGATTCGTTCNCAGGCTGGACGTGCGACGTCTCGATCCTCG
ATTCTTCTCGATAAAGCATTATCGATTCGTGTATTCGGTTTTCAATCGCA
TACTCAACTCGATATCGATTCCTTCttaaatttcattcataaaGTAGAAT
TACAGGTGAAACACTTTGTGTCATTATTGTCATTCCTCATTCCTAGGGTA
TTTTTAGAAACATCAATGGAACTGGGCTATTCAAGAAAATGATCACTTGT
CGCTTTTTAAAATTCTATGCCCCCTGTATCATTGACTAATTTTCGTATCC
CCTGAATCATCACCGACAGAAAACCCCTGGTGGATTTGTCATTTCGACGT
AAAAGCCTTTATAAACTCATTGTTGCACAAAAACGCCCTACCCTTATAGT
CTTGTGACCGGATATTTGAAAATCATTCTACCTGGATATTTTACACCACT
CTCCTTGAAATTagctcttttgaaaaaagtctatTGTCTATCTTATGATG
ATAATTATGAAATTTATCaagaacttttcttcatttCAACAGGCGGAGAT
TTTTACGATTCCAATGAAACCAAGATACATGTGGGGTGCTTTGTTTATCG
CTGTCCAAGTGATAATTCTCATCTCGCAAACAGGTGGCTTCAATAATGAT
AACAGTAAATGGCTTTGATGTGCATAAAGAAATCAAATGATTCTGACTCC
ACGTTGAACTAACATTACATTAAATTAGAATTGGGTCCGAAACAAACTCT
CTAATGGTCTTGACGATACAATCTCCAATGCAGATGATACTAAAATAGGA
GATATTTCTAACATCGTAGGCGACGATGgtttttaaaagcattttggAGA
CATTCTTTTCATTACCGTCCACTCTTAAAGAGTTGATTTCCTCATACCTA
CTTACAGACATTTTACAAAGTGAAGAAGGAATTGGGAAAAGTTTTCTGGC
AATTGTCGAAAATCTTCCTCGACCGATATCTGAGTTATtccttatttttg
atttttcattaagtgaaacaatattacatatttcaATGAATATTTTTATG
ACAACAGATAAAGCATATCCAAAAAGTTTAATATATTGCGATAGAattta
taaatataaacaaaGTTGTAAATATTTATCTAAGCAGTTGTTACGTACGT
ATTCCCAAATGTTACAGTTCAGTTTTATAGTTATACTGAAAGGATTTTGT
AGAGAGGTTTTCAAGTTGACTAACTTATGTAACTTCCGCCATCACTTAAG
TAAACGTTGGATTTGCGGCAGGTTTTCCTGAAGTTATGTAAACTTTGACA
AACCTGAGACAATAAAAATCTTTAATCAATTATCCAACAGCGTCTGGAAT
CAACAGGGTATAAAAACTGTTTGTTCAATCAAGAGATAATCAATTTCCAA
GGTCAATAAtagaatttggaaaaaaaatcaaagattagATTATAAAAGTT
TAGTctatttttctagattttatacatttttttgtaaaagtattTCCCgt
atttccatatttcttttctttgtacATAACATTATCGAATTCCTCAACCT
TGCTCAAAACCATTATCTAATCGTGGTCTAGAAGCTATTTTTTATGTAAa
acgaaaattttctcaaagtgTATAATATGatgcaaaaaatatatttctta
aaTACTCAAATCATCACCTGTGTGATTGCTCTTTTTTgaacctaccccgg
tggaggtcctataaattaacctttgtccgttcgtccgttcgttcgttatt
ag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029364XLOC_029364Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045946-exon-scaffold_104-1491911889:247127..247197TCONS_00045946-exon-scaffold_104-1491911889:247127..247197Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:247127..247197TCONS_00045946-exon-scaffold_104-1510915933:247127..247197Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:247127..247197TCONS_00045946-exon-scaffold_104-1575043694:247127..247197Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:249421..249478TCONS_00045946-exon-scaffold_104-1491911889:249421..249478Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:249421..249478TCONS_00045946-exon-scaffold_104-1510915933:249421..249478Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:249421..249478TCONS_00045946-exon-scaffold_104-1575043694:249421..249478Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:250170..250286TCONS_00045946-exon-scaffold_104-1491911889:250170..250286Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:250170..250286TCONS_00045946-exon-scaffold_104-1510915933:250170..250286Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:250170..250286TCONS_00045946-exon-scaffold_104-1575043694:250170..250286Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:251157..251339TCONS_00045946-exon-scaffold_104-1491911889:251157..251339Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:251157..251339TCONS_00045946-exon-scaffold_104-1510915933:251157..251339Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:251157..251339TCONS_00045946-exon-scaffold_104-1575043694:251157..251339Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:251748..251978TCONS_00045946-exon-scaffold_104-1491911889:251748..251978Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:251748..251978TCONS_00045946-exon-scaffold_104-1510915933:251748..251978Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:251748..251978TCONS_00045946-exon-scaffold_104-1575043694:251748..251978Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:253101..253147TCONS_00045946-exon-scaffold_104-1491911889:253101..253147Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:253101..253147TCONS_00045946-exon-scaffold_104-1510915933:253101..253147Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:253101..253147TCONS_00045946-exon-scaffold_104-1575043694:253101..253147Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:253498..253611TCONS_00045946-exon-scaffold_104-1491911889:253498..253611Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:253498..253611TCONS_00045946-exon-scaffold_104-1510915933:253498..253611Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:253498..253611TCONS_00045946-exon-scaffold_104-1575043694:253498..253611Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:254898..255069TCONS_00045946-exon-scaffold_104-1491911889:254898..255069Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:254898..255069TCONS_00045946-exon-scaffold_104-1510915933:254898..255069Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:254898..255069TCONS_00045946-exon-scaffold_104-1575043694:254898..255069Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:255298..255397TCONS_00045946-exon-scaffold_104-1491911889:255298..255397Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:255298..255397TCONS_00045946-exon-scaffold_104-1510915933:255298..255397Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:255298..255397TCONS_00045946-exon-scaffold_104-1575043694:255298..255397Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:255771..255877TCONS_00045946-exon-scaffold_104-1491911889:255771..255877Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:255771..255877TCONS_00045946-exon-scaffold_104-1510915933:255771..255877Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:255771..255877TCONS_00045946-exon-scaffold_104-1575043694:255771..255877Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:256194..256431TCONS_00045946-exon-scaffold_104-1491911889:256194..256431Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:256194..256431TCONS_00045946-exon-scaffold_104-1510915933:256194..256431Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:256194..256431TCONS_00045946-exon-scaffold_104-1575043694:256194..256431Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1491911889:256819..258028TCONS_00045946-exon-scaffold_104-1491911889:256819..258028Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1510915933:256819..258028TCONS_00045946-exon-scaffold_104-1510915933:256819..258028Clytia hemisphaericaexon
TCONS_00045946-exon-scaffold_104-1575043694:256819..258028TCONS_00045946-exon-scaffold_104-1575043694:256819..258028Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104supercontigscaffold_104:247127..258028 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.46005	3.18863	2.25912	0.89066	1.52497	1.18715	1.70112	1.4598	1.67417	1.75866	0.704287	1.26427	4.4655	4.60918	3.93415	4.37199	3.57332	3.51436	4.85089	5.44029	5.34076	6.90512	4.61659	4.24292	0.762168	3.28136	5.04351	3.09933	5.05577	5.22454
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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