TCONS_00045945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045945
Unique NameTCONS_00045945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045945 ID=TCONS_00045945|Name=TCONS_00045945|organism=Clytia hemisphaerica|type=transcript|length=2577bp
acagaaaaaatatCACACGTCATCTTTTATCCATGTCCGTTTCCTCGTGG
ACGTCGAGTTATATTTCGGACGTGTCCACTGATGACCAGCAGTTGGACTC
TGAAAATTCCGACCCCAGTTTGAATTCTAGTTATGCTGATGTTTTTGAAG
CCAGTGGTATTGTGATTCGTGATTATGAAGGCTCATTTTCGAAAAGTCCC
TTACATCAAAATGCAGTGACGTACAATTTGAACAAATGCAAATCAAACGT
TGTCATTCCATATTTCAAGCTTCTATGTCTGATTGGTTGGCGTCCCTTTG
GATACAGATATGATTGTTGTCCAGCGTGGTTGATCAATTTTTGGAATTAT
TTgtacactttcattttcttttgtattcttATATTTTGGTACGTTATTCG
TGTCTTAACTTGTAATGGACAGTTGGTTGTGGATAAACCTGCACATATCA
TTAAACCTTCTgtgACCCCAATTACTCCAACGTATGGACCAAACGTCACT
TTTATCAATTGGACCACGACAAACTCTTCTAACTTTTTCAACGGGTCCAA
CCAACAAGAACTCCAGATTCGAACCTGTAATCATATCTTTGGCACCTACG
TCATTCCCAATTTCTTGCATTTTTTCGCATTCCTGATTGGGTTTTATCAT
TTTCGCGTTCAAGAACATGAAGGCTTATACGCTCTCATGGAAAAGGTATA
TCTTCAAAGCCACaacccaagcaaaatgaccaaAAGGTTGAGattatACT
TATTTCTTGGTGTATTTTGGTTGATTACATGTCTGGGAACCATGATTCAT
TATTTCTTCGCTTTCGGTCTTCATATTGGAACCGGAATTCCCAAGTCAAG
ACCAATTTTAATGTATTCCATGGCCACTCTGATCACTGTTTCCAACTTAC
TATCGAACTGTGTCAACTTGGCTGCAGCATTAAGTTATTGTGGACAGTGT
GATTTACTGACCTATTACATCGATGATGTGGCTGAGAGGCTGGAAGAAAA
GTCCACAGAACTGAAAACTGCCATGAAGGAAATTTTGGAGATCAAACGAA
ACTTCCATCGTCTAAATGGATCGCTATCAATCAGTGTTTCTTTACTTATC
TTTGATGCACTCATCGTTCTTATATTAAaTTCAGTGCTTCTCTTTCAATT
TTACAACGACATCACGTACGTTTGGTTATATCGTCTGGTGACCGTCTTCG
AGTTGTCCCTTTTTTGTTGTTTCGTCTTTGTTTTGGCTGGACGTGCGACG
TCTCGATCCTCGATTCTTCTCGATAAAGCATTATCGATTCGTGTATTCGG
TTTTCAATCGCATACTCAACTCGATATCGATTCCTTCttaaatttcattc
ataaaGTAGAATTACAGGCGGAGATTTTTACGATTCCAATGAAACCAAGA
TACATGTGGGGTGCTTTGTTTATCGCTGTCCAAGTGATAATTCTCATCTC
GCAAACAGGTGGCTTCAATAATGATAACAGTAAATGGCTTTGATGTGCAT
AAAGAAATCAAATGATTCTGACTCCACGTTGAACTAACATTACATTAAAT
TAGAATTGGGTCCGAAACAAACTCTCTAATGGTCTTGACGATACAATCTC
CAATGCAGATGATACTAAAATAGGAGATATTTCTAACATCGTAGGCGACG
ATGgtttttaaaagcattttggAGACATTCTTTTCATTACCGTCCACTCT
TAAAGAGTTGATTTCCTCATACCTACTTACAGACATTTTACAAAGTGAAG
AAGGAATTGGGAAAAGTTTTCTGGCAATTGTCGAAAATCTTCCTCGACCG
ATATCTGAGTTATtccttatttttgatttttcattaagtgaaacaatatt
acatatttcaATGAATATTTTTATGACAACAGATAAAGCATATCCAAAAA
GTTTAATATATTGCGATAGAatttataaatataaacaaaGTTGTAAATAT
TTATCTAAGCAGTTGTTACGTACGTATTCCCAAATGTTACAGTTCAGTTT
TATAGTTATACTGAAAGGATTTTGTAGAGAGGTTTTCAAGTTGACTAACT
TATGTAACTTCCGCCATCACTTAAGTAAACGTTGGATTTGCGGCAGGTTT
TCCTGAAGTTATGTAAACTTTGACAAACCTGAGACAATAAAAATCTTTAA
TCAATTATCCAACAGCGTCTGGAATCAACAGGGTATAAAAACTGTTTGTT
CAATCAAGAGATAATCAATTTCCAAGGTCAATAAtagaatttggaaaaaa
aatcaaagattagATTATAAAAGTTTAGTctatttttctagattttatac
atttttttgtaaaagtattTCCCgtatttccatatttcttttctttgtac
ATAACATTATCGAATTCCTCAACCTTGCTCAAAACCATTATCTAATCGTG
GTCTAGAAGCTATTTTTTATGTAAaacgaaaattttctcaaagtgTATAA
TATGatgcaaaaaatatatttcttaaaTACTCAAATCATCACCTGTGTGA
TTGCTCTTTTTTgaacctaccccggtggaggtcctataaattaacctttg
tccgttcgtccgttcgttcgttattag
Run BLAST on NCBI

transcript from alignment at scaffold_104:247092..258028+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045945 ID=TCONS_00045945|Name=TCONS_00045945|organism=Clytia hemisphaerica|type=transcript|length=10937bp|location=Sequence derived from alignment at scaffold_104:247092..258028+ (Clytia hemisphaerica)
acagaaaaaatatCACACGTCATCTTTTATCCATGTCCGTTTCCTCGTGG
ACGTCGAGTTATATTTCGGACGTGTCCACTGATGACCAGCAGTTGGACTC
TGAAAAGTATGAATAACCTTCGGTATAATTTCCCTTTAATCTTTATTCGT
TTGTCTTCTCCTCGTCAATTGGTCAATTAAAAGTTTCGTGTCCAGCTTTA
AAGGACTAACATAAACTGATAGTGAATTCCCTTCTTTGTGATCGGAGGAC
AGCTTGAAAGTAAACCTAGGGTAAAGCTACGAgacccggaattcccgagt
tgttttttccgagttaaaaaaaccgagttaaaaaaaacccgagttatccc
gagttatgacgtcatttttggaatttagtgacgtcatttttcatttcata
actcggtttattttgcttcctttaactttccgagttattttccattttta
aactcgggaatttttgcttcctctAACAtaccgagttattttccattttt
aaactcgggaatttttgcttcctctAACAtaccgagttattttccatttt
taaactcgggaatttttgcttcctctAACAtaccgagttattttccattt
ttaaactcgggaatttttgcttcctctAACAtaccgagttattttccatt
tttaaactcgggaatttttgcttcctctaacattccgagttattttccat
tttttaactcgggaattttttcttcctttagctttccgagttatttttga
atttttaactcgggaattttatgCTTCCtgtagctttccgagttattttc
cattttttctggCTTGTAAAAACAGCCAATAGTTCCAATAAGGGTCACAA
AATCCCGAAATAATCAgttttttcctcaatttttgcggcacatacccgtc
agctcgcaaccctagtatcccCGGGGCTTTTATAAAGCCGAACGGGTCTT
ACACGATCCCTCCATGTTTTTCAATAACACAGGGATGTGCCAAGCCAAGG
GCGACTTTTCTGCttctaaaaattttctcacgAAAATTTAGTGTTCATTC
ATTCGCTTACGTTACGTTTATTCTTTGTACGTGTGACAACGAGtgacaaa
aaacataaaaatctaCGAATAGTCTGTGAAATGATTGATTCAAGAATCGT
TGGTgattcattcaatttttttacagcgaagggggaaggacTCAGTGAAT
TTTTCTGAGAATCTTGTCATGTCacttacagtattctttaatgaaatagg
gtggaaatatgaattttgaaatagctttatctCATTACTTGCCTGctgta
ttttttgagattttatttatgctgtaatatttttgaagggcttacacttt
gtttatctagcaggttttaataaaacctgctagataaaaacttcagttct
tgcttttcaattattcacttgtttgttgattattcattttattAAGCAAG
TTAAGGTTTTCTAGTTGGTAATGGATGGTTATGTCTTTGATTTAGGTTGG
TATGGGATCAATAGATTAAAactggtgtttttttttatgaagaaaaataa
ctcggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
cgagttaaaaaatggaaaataactcggaaagttaaaggaagcaaaaattc
ccgagttaaaaaatggaaaataactcggaaagttaaaggaagcaaaataa
accaagttatgaaatgaaaaatgacgtcactaaattccaaaaatgacgtc
ataactcgggacaactcgggttttttttaactcggtttttttaactcaga
aaaaataactcgggaattccgggcctctaAAGCTACTCAGTAAATAGTAT
AGTAGCTTGGGCCGTGTATATCTGCGAAACTTTACCACATCCTTTGGCTC
TACCAAAAGACATCATGTGAATTTACTTTCGTTTAATTTTATGAAGCTAA
TACATGAATCAGAGGTCTGTGACTCTCTAAAACTATGATCTTTTTAGTAT
AACTTTTTTAAGTAAATTTTTCAGGTGGATGGGTGCCTGGGTGACTAACT
AATTTACAGTGAGTGTAAGAGTTTTCAGTCGAAAATTTGGCTCctataat
aataattttaaatttttttcatcgTTTAGTTCCGACCCCAGTTTGAATTC
TAGTTATGCTGATGTTTTTGAAGCCAGTGGTATTGTGGTAAGCTATTTAC
gtgttttctataagaacatgcaaaatttattaaaatgttcttattttatt
tttttagtacATCTGGGCAATTCCCTAAGTCACCTTTGTTATTTTAGAGt
gcacaaagccttaaaatgttcataacttgtttttgatattttggccatta
aaGCCGCACGGGTGCTctgatatagtttgttctcataatcCTGGTTTTTC
TTAGTGTCAAACATCCCATCCTTTCAATTTGAAATGTGAAAAGGGCTTGT
AACTTACTTACCTTTAGTACCCCTTAGTTAAGGGCTAAACGTTAGTCGCT
GGACAATGACATGCACGGCTGCGGTTCTTGGTGCCAGTCAGTTAAATCCA
TTGTCTTGGCTGTTGTCGATCAATGGCTTTATCGAAATTACGGATTAGAA
AGAAAAGTAGGTTTCGAGGGAAAAAAGTGtgcaaagttcttccgtcttgT
ACGGGTTTACGTCTGATCGAAGtacaaaaaagaatttaacaaacttaaaa
ttataaaatttgaagaattttgtcTAATGTGTTGTTCAAAATCCATTTCC
GTCTGAGCCGAATAACTTTGCTTTGACCATTGGGAAAAGAGGCGATCTTC
GTTCATGAATGAAGATATACAATCTCAAATAGGTACCTTGAGTCGTTTAA
GATTTCTGTGTGATTTGCTTTCTTTCAGATTCGTGATTATGAAGGCTCAT
TTTCGAAAAGTCCCTTACATCAAAATGCAGTGACGTACAATTTGAACAAA
TGCAAATCAAACGTTGTCATTCCATATTTCAAGCTTCTATGTCTGGTAAG
TAGGAATAGACGAGGACAAATCTTCTCCTAAAACCACTGAAAATAAAAGG
CCCTTAAAATTGTATACCGAACTTActgttctacatctgcaatttgagct
ttacatagctcatttgacgtcaatcgttACTCTGATTATCAGCCGGTTTG
AGAGAGAGTGATATACGAGTAAAGGTAGAGTCTATTACCATATTTCCCTT
ACACCCTGCCTGGTAGTGCTTGGGATTtgaacacagtccattgcggtgca
agtctgtgatcgaaactttcacactaccaatcggcagggtgttagggaaa
tatggtgataaaCTCTCTGTccttaaaattgtttttttttgtgatctATA
GGAAAGATTTTACAGAGATTTCTATACAAAAgttaatttaatttcaattt
tcggAGTTTGTGGTGCTCAAGTAGAAACAAATCTCTCATAAATCATATCC
AAGACTTAAGAAAAGAGGCTGGTAGCGATAAGGGAGTGAGTCTATGCACT
TTTTTTGCATATTTTAAACACGAGTAGTTGAAAGTGCACAGTTTTAGTTG
TCAACTCTACTTCAGCTTAGACCAATCTAACCAATTTAAGCTTTTCATAT
GCTACCGGTCGAGCTAGCCGACCCGCGAACTAGAAGTAGAGTTGCTACAA
ACTATTTTCGTTCTATGCTGTCTTTTTTAGATATGTTGACGTCCCTTTGG
GTGCAGATATGATTGCTGTTTAACCTTTTCTTTGAATGTGTGGTTTTAAG
ACTCTCAATTATTAATAAACAAACTAACCAGACTAGCTTTTCATGTGCTA
TCGGCCGACCTTCTTGACCCGTGAACCAGGACCAAAGTTTCAAGATATAT
CTGTTATCTTTTTAGATTGGTTGGCGTCCCTTTGGATACAGATATGATTG
TTGTCCAGCGTGGTTGATCAATTTTTGGAATTATTTgtacactttcattt
tcttttgtattcttATATTTTGGTACGTTATTCGTGTCTTAACTTGTAAT
GGACAGTTGGTTGTGGATAAACCTGCACATATCATTAAACCTTCTgtggt
aagattttttttcactgtTATGCTAACTCTCTTGTCACTTAAATTATTCA
TTACAACAATTAAGCCACCGCCTAAATCATCGTCTCAGGTTCTAATTTTC
GTTTGCAATGTGTCTAAAGGTAGAGCTTTTGGATACGGTGCGACCGGAAA
AGTGGTTCTTGATGCCTCTGCTTATTGTTCACTGATTAAAAAGAAAGTCC
TAAGAAGTGGGGCAATCCAGGGATAAAGTTATAGAAATACTTATCAACTG
AAAACagccatttttagaaaattcataCATATAACAAAACGGGTGCTATT
TTAGGCTATTTATTAGACACACAAAATTCCAAGTCTTATCTATCGGCCCT
TTAGGGGGTTGGGTCGTAATATACAATGGACCTAACATCAAATTTTCTTG
TTTCAGACCCCAATTACTCCAACGTATGGACCAAACGTCACTTTTATCAA
TTGGACCACGACAAACTCTTCTAACTTTTTCAACGGGTCCAACCAACAAG
AACTCCAGATTCGAACCTGTAATCATATCTTTGGCACCTACGTCATTCCC
AATTTCTTGCATTTTTTCGCATTCCTGATTGGGTTTTATCATTTTCGCGT
TCAAGAACATGAAGGCTTATACGCTCTCATGGAAAAGGTGAGAgatgaaa
gaatatttcttcCCTtatgtcttcaaaaaaattagaattttaatTTCGAG
AGAAGAATTGTTGGAAAGTCTCTCCAAGGTTAgaaaacttttcgaaaatt
ttctttctaaagATTCTTCGCTTCGTTTCACCaggggctgagctagttcc
tcTATGTAGATATACAATGCTGTCATTTTTTCTTCTGATCACGGTTGAAC
ATCTAATTAGCGGGCACCATCTGGAGACaagttagtgtccgctaatttaA
AGACTTTAAACTAATGGGCTCAAATTTCAGAACTACACTTTACCAATGGG
AAATTATTCCATGGCTAGCCACTATAAATATGTTTTATTATTGTTTGaga
tatattttgataatgtttCGATAATGCactatttataaaagttttccTTC
TATCGAAGATAGATTAGGTACACTTTTTCTATTATAATATTAGAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAtcataacattacatcatt
atatatcaacggaaagcttagactctctactttctttttctttatttttc
aacgatCAGAAAGCAAGCCAATTAAAGATATTGCCGGAGGAAAACATGCC
TATCAAATTGCGTATATGTACGACATTCGGAACGTCTCAAGgacgtatat
gtacggcattcgggtccaaaaggttaaataaaaaagtaattattgaataa
ttgaataaaaaactcttaaagaaagaaatttttgcggcgACTCTGACGGA
TTTTGCGGAtccccaaaatattttcaaaacaaccaTACCACCGACGGGTG
GTTTCTACGGTGATTTATAGTCGTTGATCTTTCAAATCAAACGTGAAATT
TTCTCCTAGGTATATCTTCAAAGCCACaacccaagcaaaatgaccaaAAG
GTTGAGGTAAGATCTTTTTATTTCGCATCACATCCAAGCTAAAACAAGAC
AAGAAGCCCAGTGACTCAAAAAAGTAACAAGGCGCCATTTCTTCTAAAAT
GagcttgaattgacaaagcgctgctttttcaaaaacaaactaCAGCACCA
CGGACAGAAAATCTCTTAAAAGTTCACGTGAATGAGTGAATTGTGAATCG
TGATTGTGCGAATTGGGTCTGCTGGGCGTGGGCCCTTAACTAAACATTGA
ATTAACATTCGAGACTTTATTACTGATACAAATCATTCGTCAAATCAATT
TTCACTCCTCATCTTCAAAATGCACCTTGAAAGAAgacatttcttttcat
tttcagattatACTTATTTCTTGGTGTATTTTGGTTGATTACATGTCTGG
GAACCATGATTCATTATTTCTTCGCTTTCGGTCTTCATATTGGAACCGGA
ATTCCCAAGTCAAGACCAATGTAAGTCTATGATATtcgatacatgttttt
ttcttttataagcattgcacttataagcatatctagacTCAAAAAATCTA
GAcgcaaaaatttaagcatatgctaaaaTGCttgattttggctgttttta
tTGCTGGGATTTTACTGCTGGAATTTCCCTAAAGTTTTGCTTGGGATAAA
AGCATCCTTAcgagcatttttcagccttgtcaAGGCCTCAACGTAAGCAT
CTTCGAGCctgttttctaatttttgtagGCTTATAAAAATACATGTGTTT
GATTCTTCGATGAAAACCCCGAATAACCAAGCTCTTATGTTACTTTAAGT
GATAttcatttaaaatatttaatattaTCCAATAGAGGAATTAAAAATTA
TTATGATTACGCACACTGCCTAGTTTTCTTTGCTAAAACTACTAACGCGT
TGGACACtagcttttagaaaaaagtcTTTGATAATCAGGGGATAATCATC
TGTTTTTGCCATACAATATTATGTTGATCTCAATTAGCTTACTCTACTAA
AACTCATTATTATCAACTGATTTCTAACACATCTTTATCAACTCTTAAAA
CATGAGAGGGGTCTTGGTTAGATTTTACATATGATTTTACCAGGAAGGAG
TAACGTCATCAAAATGTCTGTATCTGTAAGaaaatagcgagattatgtat
cggagatattctacggctacggttgcggggctgcccattgcgggtcgtca
ccaaaggcgacatgtcgttgtctactttgctctgtacgggaaaaacatca
aaacaccgtataagcaaagtcgacataatgccgtacgtcaaatatcgaac
ttgctttcacccgccattacttgccttactcgccatttccctcgccgctt
taaccgtagccgtagagaattccagatacataatctcgctaatcATAGCA
GAAACTTcagatatttttttatcaatttgacgtcaatcaaTCCTGGCAAA
CTCGAACGCAATCTCCTCACACTTTAAGGGTTGACAGTTGTTTCCATCTT
ACATTCATACACGAGAAGACTTCGATTTACAAGAAaggagtgacgtcatc
aatatgTGTGAATAATAAGTTATGCTCTATTTGATCTTAAAATTGGCTCA
GTTGTTATTTATAGTCAAGGACTATAATGTGTGGATTTGTAAGAAAATCA
ATGCAGTAACTTCAGATATTTGATTTGACGTCAATCTTCCTagcaaactc
gaacccagtctccTTACAGGGAGAGGGCTGACAGTTGCATCTTCTTCTAT
TCATAGTTTAATGTATTCCATGGCCACTCTGATCACTGTTTCCAACTTAC
TATCGAACTGTGTCAACTTGGCTGCAGCATTAAGTTATTGTGGACAGTGT
GATTTACTGACCTATTACATCGATGATGTGGCTGAGAGGCTGGAAGAAAA
GTCCACAGAACTGAAAACTGCCATGAAGGTATGTTTCATACTTAATAACA
TTATGTAACATTGTGCAaaccttttatttttaaagctaagttgacggtat
ttaagaGGAAGTCGGAATCTTTGGGAAATTTCAACTGCCAACTTTCTGCC
CGCTTTTTGCTTACTGTAGTAATTAGAAAAGAAAGGGTAGAAAGTTGTCC
GTCTAAACTAAAACTTAATTACGCTATTAGTAAAAGAGATTGATTTTCTA
TCACAGGAAATTTTGGAGATCAAACGAAACTTCCATCGTCTAAATGGATC
GCTATCAATCAGTGTTTCTTTACTTATCTTTGATGCACTCATCGTTCTTA
TATTAAGTAAGTAGTAAACCATGTGCTGCCATGTGTCGTGTTTTTCGTAT
ACAActgaattgaatattttttacctaGGAGAGATTCTTAACTCTTGGAC
TTCCCTGCTCTGGGGTACTAGGGTTAAAGTCGAGCATGTGCGGACCGGAA
CTCTgattaaccaagtaaattaaaagaaaatctagcacaaaaatggcttt
aggttgaaaaataatcgcaatttagggtaatttcaagcatgtttttgatg
atatcactcaaaaacaggggtggtacctggaaatcttttctgaaaacagt
tactaccaaggtcaATAACAAGGCTAATATCAAAGAAATCTCTTAGCAAT
GTAAACTTTaatatcattttttgtttcagaTTCAGTGCTTCTCTTTCAAT
TTTACAACGACATCACGTACGTTTGGTTATATCGTCTGGTGACCGTCTTC
GAGTTGTCCCTTTTTTGTTGTTTCGTCTTTGTTTTGGTAAGTATCTTACG
TGGATTATTTTCTCGAGGATTATATTTTGCGAGTTTCACGATTTTTAACG
AGAATTCACGAAATTTAATGCtcgccaaaattttcaaaccagtatttttg
acaaaaaccctagatttttgccaaaaccctTAGAAAATTAAATTCAGTGG
GTATTAACACACCCTGGTAAACTTCAGCGAGAGGGTTAAAGGATCAAATC
CAAACCACGAATTTCTggttattttcaaatcaattatCAATTATGCTCAC
TTTTTCAAACATGGTGAATTATTTCTTTACTCTTGTATTTTTTCAACAAC
AGGCTGGACGTGCGACATCTCGATCCTCGATTCTTCTCGATAAAGCATTA
TCAATTCGTGTATTTGGTTTTCAATCGCACACTCAACTCGATATCGATTC
GTTCNCAGGCTGGACGTGCGACGTCTCGATCCTCGATTCTTCTCGATAAA
GCATTATCGATTCGTGTATTCGGTTTTCAATCGCATACTCAACTCGATAT
CGATTCCTTCttaaatttcattcataaaGTAGAATTACAGGTGAAACACT
TTGTGTCATTATTGTCATTCCTCATTCCTAGGGTATTTTTAGAAACATCA
ATGGAACTGGGCTATTCAAGAAAATGATCACTTGTCGCTTTTTAAAATTC
TATGCCCCCTGTATCATTGACTAATTTTCGTATCCCCTGAATCATCACCG
ACAGAAAACCCCTGGTGGATTTGTCATTTCGACGTAAAAGCCTTTATAAA
CTCATTGTTGCACAAAAACGCCCTACCCTTATAGTCTTGTGACCGGATAT
TTGAAAATCATTCTACCTGGATATTTTACACCACTCTCCTTGAAATTagc
tcttttgaaaaaagtctatTGTCTATCTTATGATGATAATTATGAAATTT
ATCaagaacttttcttcatttCAACAGGCGGAGATTTTTACGATTCCAAT
GAAACCAAGATACATGTGGGGTGCTTTGTTTATCGCTGTCCAAGTGATAA
TTCTCATCTCGCAAACAGGTGGCTTCAATAATGATAACAGTAAATGGCTT
TGATGTGCATAAAGAAATCAAATGATTCTGACTCCACGTTGAACTAACAT
TACATTAAATTAGAATTGGGTCCGAAACAAACTCTCTAATGGTCTTGACG
ATACAATCTCCAATGCAGATGATACTAAAATAGGAGATATTTCTAACATC
GTAGGCGACGATGgtttttaaaagcattttggAGACATTCTTTTCATTAC
CGTCCACTCTTAAAGAGTTGATTTCCTCATACCTACTTACAGACATTTTA
CAAAGTGAAGAAGGAATTGGGAAAAGTTTTCTGGCAATTGTCGAAAATCT
TCCTCGACCGATATCTGAGTTATtccttatttttgatttttcattaagtg
aaacaatattacatatttcaATGAATATTTTTATGACAACAGATAAAGCA
TATCCAAAAAGTTTAATATATTGCGATAGAatttataaatataaacaaaG
TTGTAAATATTTATCTAAGCAGTTGTTACGTACGTATTCCCAAATGTTAC
AGTTCAGTTTTATAGTTATACTGAAAGGATTTTGTAGAGAGGTTTTCAAG
TTGACTAACTTATGTAACTTCCGCCATCACTTAAGTAAACGTTGGATTTG
CGGCAGGTTTTCCTGAAGTTATGTAAACTTTGACAAACCTGAGACAATAA
AAATCTTTAATCAATTATCCAACAGCGTCTGGAATCAACAGGGTATAAAA
ACTGTTTGTTCAATCAAGAGATAATCAATTTCCAAGGTCAATAAtagaat
ttggaaaaaaaatcaaagattagATTATAAAAGTTTAGTctatttttcta
gattttatacatttttttgtaaaagtattTCCCgtatttccatatttctt
ttctttgtacATAACATTATCGAATTCCTCAACCTTGCTCAAAACCATTA
TCTAATCGTGGTCTAGAAGCTATTTTTTATGTAAaacgaaaattttctca
aagtgTATAATATGatgcaaaaaatatatttcttaaaTACTCAAATCATC
ACCTGTGTGATTGCTCTTTTTTgaacctaccccggtggaggtcctataaa
ttaacctttgtccgttcgtccgttcgttcgttattag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029364XLOC_029364Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045945-exon-scaffold_104-1491911889:247092..247197TCONS_00045945-exon-scaffold_104-1491911889:247092..247197Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:247092..247197TCONS_00045945-exon-scaffold_104-1510915933:247092..247197Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:247092..247197TCONS_00045945-exon-scaffold_104-1575043694:247092..247197Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:249421..249478TCONS_00045945-exon-scaffold_104-1491911889:249421..249478Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:249421..249478TCONS_00045945-exon-scaffold_104-1510915933:249421..249478Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:249421..249478TCONS_00045945-exon-scaffold_104-1575043694:249421..249478Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:250170..250286TCONS_00045945-exon-scaffold_104-1491911889:250170..250286Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:250170..250286TCONS_00045945-exon-scaffold_104-1510915933:250170..250286Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:250170..250286TCONS_00045945-exon-scaffold_104-1575043694:250170..250286Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:251157..251339TCONS_00045945-exon-scaffold_104-1491911889:251157..251339Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:251157..251339TCONS_00045945-exon-scaffold_104-1510915933:251157..251339Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:251157..251339TCONS_00045945-exon-scaffold_104-1575043694:251157..251339Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:251748..251978TCONS_00045945-exon-scaffold_104-1491911889:251748..251978Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:251748..251978TCONS_00045945-exon-scaffold_104-1510915933:251748..251978Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:251748..251978TCONS_00045945-exon-scaffold_104-1575043694:251748..251978Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:253101..253147TCONS_00045945-exon-scaffold_104-1491911889:253101..253147Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:253101..253147TCONS_00045945-exon-scaffold_104-1510915933:253101..253147Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:253101..253147TCONS_00045945-exon-scaffold_104-1575043694:253101..253147Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:253498..253611TCONS_00045945-exon-scaffold_104-1491911889:253498..253611Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:253498..253611TCONS_00045945-exon-scaffold_104-1510915933:253498..253611Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:253498..253611TCONS_00045945-exon-scaffold_104-1575043694:253498..253611Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:254898..255069TCONS_00045945-exon-scaffold_104-1491911889:254898..255069Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:254898..255069TCONS_00045945-exon-scaffold_104-1510915933:254898..255069Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:254898..255069TCONS_00045945-exon-scaffold_104-1575043694:254898..255069Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:255298..255397TCONS_00045945-exon-scaffold_104-1491911889:255298..255397Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:255298..255397TCONS_00045945-exon-scaffold_104-1510915933:255298..255397Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:255298..255397TCONS_00045945-exon-scaffold_104-1575043694:255298..255397Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:255771..255877TCONS_00045945-exon-scaffold_104-1491911889:255771..255877Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:255771..255877TCONS_00045945-exon-scaffold_104-1510915933:255771..255877Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:255771..255877TCONS_00045945-exon-scaffold_104-1575043694:255771..255877Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:256300..256431TCONS_00045945-exon-scaffold_104-1491911889:256300..256431Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:256300..256431TCONS_00045945-exon-scaffold_104-1510915933:256300..256431Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:256300..256431TCONS_00045945-exon-scaffold_104-1575043694:256300..256431Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1491911889:256819..258028TCONS_00045945-exon-scaffold_104-1491911889:256819..258028Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1510915933:256819..258028TCONS_00045945-exon-scaffold_104-1510915933:256819..258028Clytia hemisphaericaexon
TCONS_00045945-exon-scaffold_104-1575043694:256819..258028TCONS_00045945-exon-scaffold_104-1575043694:256819..258028Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104supercontigscaffold_104:247092..258028 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.357922	0	0	1.31942e-09	0	0	0	0.274962	0	2.19173	1.9047	1.84076	2.6945	1.9145	1.08502	4.39024	4.82843	3.87383	2.61168	0.246654	1.01599	0	5.56265e-10	0.727549	1.00335	1.00325	0.24524
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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