TCONS_00045919 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045919
Unique NameTCONS_00045919
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045919 ID=TCONS_00045919|Name=TCONS_00045919|organism=Clytia hemisphaerica|type=transcript|length=169bp
GTTTGATGTTCACATGcagctgttttgttttgagctTGGTCAAGATTGAT
GAAGAATCATTCCAAACAGCACACATCATTATGTCTACGTGAGTTTAAAG
TAGTAGTTCTGATATGGATGCAGCACCACACACATAGTAATTTTGTCATC
CTGTTTCTTGCTTgtgctg
Run BLAST on NCBI

transcript from alignment at scaffold_102:431462..431630

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045919 ID=TCONS_00045919|Name=TCONS_00045919|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at scaffold_102:431462..431630 (Clytia hemisphaerica)
cagcacAAGCAAGAAACAGGATGACAAAATTACTATGTGTGTGGTGCTGC
ATCCATATCAGAACTACTACTTTAAACTCACGTAGACATAATGATGTGTG
CTGTTTGGAATGATTCTTCATCAATCTTGACCAagctcaaaacaaaacag
ctgCATGTGAACATCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029342XLOC_029342Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045919-exon-scaffold_102-1491911889:431462..431630TCONS_00045919-exon-scaffold_102-1491911889:431462..431630Clytia hemisphaericaexon
TCONS_00045919-exon-scaffold_102-1510915933:431462..431630TCONS_00045919-exon-scaffold_102-1510915933:431462..431630Clytia hemisphaericaexon
TCONS_00045919-exon-scaffold_102-1575043694:431462..431630TCONS_00045919-exon-scaffold_102-1575043694:431462..431630Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:431462..431630 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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