TCONS_00045846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045846
Unique NameTCONS_00045846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1589

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045846 ID=TCONS_00045846|Name=TCONS_00045846|organism=Clytia hemisphaerica|type=transcript|length=1589bp
TGAAAGATCACACCTTCATATCGATCATACGTGCTCCCTCTCAAGTATGG
CGTATGATCCAAGGAGATGGCTAAATTACGACACACTCGATGATCAAAAC
AATGGAGACCAAAACTATTACCAAAAACAAGAACCAGAAGATCAATACAG
AAGCTTTGATTACCAACCAACTACCACCTCAAATACATACAAAACACAAG
ATTTTTATAATCCTACCCCAGATCCAGAAAATATTTATACACCATCATTC
AATGGTAATGCTTATCAACAGCCAAACAATGGATCTATTGTTGAGAAGAA
ACGAAAAGTTGACGAGTATGACCCAATGGCTCCCAGTTTTAGTGGCTCCT
CTACCAATCAGCCACCCACACCAAAGAAAGAGCAACCGGATCCAAGAAAA
CTCGGCCATTTTATCAGCATGCTTCAAAAGATGATTAGGCCTATACCATA
TGATTACAAGAAGATGCTACCTTATGATATCATTTGCCAGTTAGCACATG
CCATGTTGGATGGAACTGTTTTTGAAATAGCCAATGGTTTGAAGGACATT
CAAAAAATAACAGAGAAGAGCTTACATGCAAAAAGAAGCAAGCTTGTCAA
CGAACATAAAGCTATGAAGCAAGAGATCAAGAAGCGACACAAAACCGAGA
TTGAGCATTCACAGTCAAGACCACATCAGATTCTGGTTTATGAGAAAAAG
CATGCTGAAGAGCTGAAGATTTTCAATGAACGAGTGGATAAAGAACTGAC
TCAAATGGATCAAAAGATTGTATTGGACTTGGATCAACAGATATCGGATC
AACAAGTCACTTTGGAGCGTGCCGGGTTACCATTGTTCTTCATCACCAAT
AACCCTCAAGAAATTCGTATACAAATGTACATCTTGGAATTTATTGTCGG
ACTATCAAATTCTCACACAAAACCATCTTGAGGGGAGGAGATTCGAAATA
TTGTGAAGAGAATTCGTTGGAAAGGTATTTATCCTTTATTTCGTTTGAGT
TCGTTTTCTTTTATTCTATACATTGGCTCATGACAAATCATGAACAAATT
GAGGCTGTTCATTTGATTGTTAAAATAACTCGGGGAGACAATGATACGAT
ATTGGATTGGATAACATTTAAGGGCAAAAGTTGCTGATGTAACCAAAAAT
ATTCTCCTTGGAAGTAACGCTACGTTTGATCGTTGGGAATATGCTCTGTT
GAGGTTGCATTTGGTAATCGAATGAAAGACACTTACGAAATGAATATAAT
AATTCATCACAGAGGCGGTACATCATTCACAAGAGCTTTGAGAAATCATT
ATTTTCACGTGCTTTCTAAAACCGGGTTTCCACAAACCCCGCGAACGGTT
GGGCGCGGTGCGGTGCGATCAAAATTTCCTTTTATAGCTCATTGACGTCa
cgaatgaattttttttgtacaCAAAGTGTGAGCTCTATCGAGCGCAACTG
AGCTCTTTTGGgagctgaaaattttcaactccCAAAAGCGTTCTCTGCGA
CCAGAATTTGATGAACCAATCAGAAGAGAGAAAATCTGCTGATTAAGcaa
ataaaatatgaaaatgtacAGATTGTGCGTAAATCGATA
Run BLAST on NCBI

transcript from alignment at scaffold_102:365140..374214+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045846 ID=TCONS_00045846|Name=TCONS_00045846|organism=Clytia hemisphaerica|type=transcript|length=9075bp|location=Sequence derived from alignment at scaffold_102:365140..374214+ (Clytia hemisphaerica)
TGAAAGATCACACCTTCATATCGATCATACGTGCTCCCTCTCAAGGTATG
ATGATTTAATTTGACCTAATCTGACCTTGTCTTGAGAATATGTCTCCAAT
TGGGGTGGCTGGGTTGGTTGTAACATGGGATTGTgtatagaccttttttc
aaagaggccaccctgttgaataattatgtagtccagcagaaaaacaatga
tgaaCCATGAATAATTactacaatatgcatgatacagtaattatgcatgg
atatatcattgtttttatggctggactacataattattcaacatgacatc
ctctttgaaaaaaggtctatttttactttttactgtTAAATcactttgac
aaaaaatttcttttaatacTTCCACCAAATTTATCAACCACACTTTTTCT
GTCAAAAAATAGATACGGTATATGTCTAGAAGAGCTGCATCTGACAAAAG
TATTCAACCAATTCACGTCATCTTTTAGTTTCGTTAAAACCTCTGGTTAA
ACAGTTACATCAATNNagagaacttcataattccccaaacaacattacat
tactatctcaaactcccatcacataaattttacaattacgtcagagtaga
ctacgcttgccaccgaagaggtttatttggaaagggtagttatattttat
tgtttgcttcttttttaaagatttgccgggttggaaaagtatgaatttct
ttgtacatattttacctaccccaaatatttaggaggctgagttttaaacg
aatcgtcaagttgaaacgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNaatgtatcaaggtctgttttatttaccccctggtgacttaacaaaaga
aacttaactcgatgttacaatccaattattgaaagtttgtctcggccttt
ttataatgagcgagacatacgttctctgattacgcaattttcatattgac
attttcgaggcattttgatgtaactgttaaACCCCGTTAAACCCCTCTCT
CGCTCAAGGGACTTTTAACTAACAGCCTGTGCAATGAGATGAATATATGT
TAGCAAGAGCCTGGTTTCTAAGATTTAGTTGATGTAAGTGGAGTGTGTCG
TGCCTGTGTTGTGTTCATTACCGTGAGTATGGTCCTAATCCGAGTATTCC
GACACCCCAAATAACTAAAAACTGttataaaaaattctatgtttacaaac
cttccttctccaagttgaacgatagaCTATTGCAAtgactctcgaaacaa
aacatctaacattATGGCTATAATAATGTCAaggtcaattaatgtgatca
aaaaagtgtaggaccctcccggcgctccggaaactTCCGGAGTTTTCCgg
agcagctaaaaaaacactatttttctctccgGAAAGTTCCGGAGCTCTTC
CAGCGCTTCCGGAGCAAGTGATTTTAACATGttctaaaaaaacatttaaa
cggctagttcgaaacacgggtcacgggtccgggtccggggcacgggttac
ggggcacAGGTCACGGGGCATGGAGTGATCGGGCAGCTCtgatcaaagta
attcaaacagaaaatgttttaaaaacgcaaaaaattatcgaaaaaatctA
TTTGAAGGTGTTTTATCCACGAATGACTATAACCACGTCCTTTCCACGTG
TTTTCGAAGTTGCGTCGTGTacaacgcagaccagaaaacaccgcaacata
ttacatacatataaCAAGCTTATATTATCAATAAATACACTTTTAGTGCt
atatgcatgttatatgttatacgtaagtaatatacatattacaattccca
TCGCCTGAAAACCAAGCTTTCTCAAGAAAATAATAGTCCGCctattgtta
aatcatatctcattatatcccctccatcaccttcagtatgaatataattt
taatggataataacgtAAAAATGATGGTATTATAAATGTGTCAGTATTTT
CCAcctaccattatgaatttttaataaaaatgacgtaattatactcatat
ctctaaaaccactatcttgcagcatttaatcgttttaaaacatgtcaatc
tatatccagtcacataattagcatcctattgagtatgaaaaaatattttg
ctgtaaattggttcagaggccttatatttcatgattttgacaatatttct
gtcattcaatatcattttgtcaaaatttgtgggtgacatattatttaaaa
attctcatgataatactattcgtatataattgtttcagacaTACTATACA
ATGGTAGTAgtactattatatgtgttatgtagtacgtgttatgaacgaat
tatacgtcatgatatcgttttattttttccggtctgtaatttgtatgccC
CGTGACAGTCTTTGAGGATGATGGTTCAcccattaatgaaattgaatttg
tcacattatATTCGAAAGCATagttgaaatttcgaaaaaataaaaaaaac
gtgagGTTTCAGTGAGTCACATGAGTCGGCGCTATCGTAATAACATTGCG
GATATCTTGCTCCAGAACGTTCCGGAGTTCCGGTGCAGACCAATCGGCAA
AAATCGTGCTCCGGAACACGAAAAAAACACCACTTTTTGCTCAGGACGTT
TCCagagcgccgggagggtcctaaaagtgtgagttgtaaaaatgattacc
tctattattctgaatccagCTGAATCTGTTGCTCATGTTTAAGATGTTAA
CAATTTatgtaatgaaaaattattttttgtataagaagcacaattattgt
aatttggttcaaatcaatgtgtatcaaatctttcagtttagttgacactt
tggtatcttcattgcgtcacagtgaaaggtttgtttttattttattttgt
atctTCCTATCTTTTAAAGACCatcagatttaggcagggctgttggaTTT
AGGATCACTCACGGTATAATAAAGGAAGGCGGACATGAATCGCTCAATAA
AATTTAGTGCATATATTTAGAAAACCACCCCCGTGTAAAGTTAACAGATC
TGAAAATATGACGCTagattttatggatttttgtaGATATCTGGTTTGCA
GTACGCGCGTGTTTCACTacggaatttttttcatatttcaatttaaaagc
ctacttggtgtgaaagagaaatcatgCATTTTTTGATACGCCGTTCATTG
TCGTTCATTTAtattggaggttcggtgaaatggtggccgaattgccatcc
catgttttgtcagatagtcccaagttaaagcagttgacatTAAAAGGGCT
AGTtcaaaacgcaggtcacaggtcagtgctgacaggtcagctttaattac
tgtaaaacaccaaggaaatgtttgaaaaaaaattgtcaaaaactgtcaaa
aatatcattctgaaggtatatattttattgatctagaacttTTTTAAAGG
TCAATCTCTATCCACCATGTGTTTAGTTGTGCTTACCACGTGCTTTCGCA
ATATGTGCTGTGTATAACACAGACCTGTAATACTTATTATATTTAATTGT
AATTGTATATTACACACATATCACACATAAATagcagttatcttttcaat
gttatgtGCATGTTACATATTTTATACacgtgttaaaatattattaatcT
CACCTTTAACCTCACTTCCcgacaggaaaatagctattttgcAATCGCTA
TATCATACCTCCTGCAGCACCTTGGGTCTGataacaaaaattaatgaaaa
tagcGTCAAAAGggttatattttataaatatttcaatatttttatcccct
gctttgtCATAGTTTTATAAGGGGGGTACGATGGCCCTGAAGGCTCAtaa
tttctcttcaaaaaacAACCGGAGTTTCCCAAAATCAAGCTGGAGTTTCC
CAAATTTTAGACAGAGTTTCCCAAAACCAAGCCAGAGCTTCCCAGATTAA
AAGGGGGTTTCCCAAATTTTAGATGGAGTTTCTCAAATACACGGGCTGTA
AAATTATATCGAATCAAGtacaatgcagtcaaaacatgtgattactcaaa
aaagttcacgtgatctTATTCCCATGTTAATTAATTGctttacagctgat
aactttgttaatagtgtcaataaattcgaaccaatcagaaataaatgtca
tgtaacaagcacataaaaatgtagaaactaaaaaaaatttgggaGACCCC
CAGCTTGATTTTGGGAAACTCCGTCTAAAGTTAGAGAAACTCCGGCTTGG
TTTTGAGAAACTCCGTTTAAAATTATTGGGAAACTCCGTCTAAAATTTGG
GAAGCTCTGACTTGGTTTTGGGAAACTCCGTCTAAAATTTGGGAAACTCC
GGTTGTTTTTCGAAGAGAAATTTTGAACCTTCAGGGCCATCGTAGGGGGa
gttttttcttcagaaaatgggaaaagtgtgggcaaaatttttttcaaaat
tctaggGTGGGGGGAAACAAAAGTAAGGGGAGAAAAAATAGCTCCAAAAA
GTCTAGGTTGGGGagaaaaaatctgaggaaaaaaattttctgttctcTGG
TGTCaaacataaaacataaaatatatctGTTCAACTTCAAGCTAAAAACA
TGTAATAGTGTTTTATATTTGAGGTGATGacaatttacattttttctttg
tatatagGGACGAGATAACATGAATAGAAGCAGTATATTGGGGCAGANCG
AGGTGGTGacaatttacattttttctttgtatattaTAGGGACGAGATAA
CATGAATAGAAGCAGTATATATgggacttttttcaattttcaagggagGG
GAACCAACCGACTAGGACACTatgtttgtatttttgatgaaaatgacgtc
atcattttcgtatctctaaaacagctgtctaggagcatttaatgttttca
aaacatatCAATTTGCACTGTTGACCTattgacctgttgacctgtgacct
gcctTTTGAACTAGCCggaaaacaattgaaattcaacaacaacATTTTTA
GTTCAAGGTGACTCCTGATCTTTGAGCTTTGGATGTTTAATATCATACAT
AGGATGGGATCACTGTATTGATATTTTGAATGTATGTTCTTGACTCTACA
GCATTCAAAGCCAACAAacagtaaaaatgaaaaatgaaaatctaaatttg
TAGAAAAGAAATCTCCAACCAAAACCTCCAGTAAAATAGTACTTAAAACT
GACCATCGTATTCAGCTGCAGTGCAGTTAATAAATAAAAGATGGATCAAA
GCTGTTTTTGAAGCTCAAGAATTTATCTTTCTTTTAATATAAACTAGAGG
AGTGTACTATatatcttttattttctttagagTATGGCGTATGATCCAAG
GAGATGGCTAAATTACGACACACTCGATGATCAAAACAATGGAGACCAAA
ACTATTACCAAAAACAAGAACCAGAAGATCAATACAGAAGCTTTGATTAC
CAACCAACTACCACCTCAAATACATACAAAACACAAGATTTTTATAATCC
TACCCCAGATCCAGAAAATATTTATACACCATCATTCAATGGTAATGCTT
ATCAACAGCCAAACAATGGATCTATTGTTGAGAAGAAACGAAAAGTTGAC
GAGTATGACCCAATGGCTCCCAGTTTTAGTGGCTCCTCTACCAATCAGCC
ACCCACACCAAAGAAAGAGCAACCGGATCCAAGAAAACTCGGCCATTTTA
TCAGCATGCTTCAAAAGATGATTAGGCCTATACCATAGTAAGAtcgataa
atatttttgttgtcttggtatatatttttatgCTAACGTCAGTAACATAG
TTTGTTTTGTGTTTGGGATTAATCTTTGCCATATGCGGCTAAAGATAAAC
CATTACTCAGAATTTTATGCGTGTTGTGCTTTTGATGTTTGAGATATTAT
GGGGCTCTATTTAAAAAATAGAACAAGATGTACAAAGGACTCACTGTTGA
TGAATGTTATTACTTTTCGCTTTGACATTCtcaaaaatcttttgcttttt
ttaagaatgtttgcaaaaagattttgcaataaaaaattgaaacaaattgT
TGATGGTTTTTGGCTTTTTATATGTTCAGTGATTACAAGAAGATGCTACC
TTATGATATCATTTGCCAGTTAGCACATGCCATGTTGGATGGAACTGTTT
TTGAAATAGCCAATGGTTTGAAGGACATTCAAAAAATAACAGAGAAGAGC
TTACATGCAAAAAGAAGCAAGCTTGTCAACGAACATAAAGGTAAAAACTC
ATGTCAGGGCCATTCCAAGAAAATGTTAACCCTATTGTAGTCTATGCCCG
ATATTGAACCATCTCGTATGAAGCGCTCCTAAAACCCTCCCTATTGGTGT
TTGCAGTTAGTAAAAAAGCGTGAAAGAACGTACCTCTTCATCTGGAATAG
CTACATAGTTGTTGAGCTTTCAAAATCCTTTTCGTATTtctttcagtttt
cattttgtaattaaaaaacgAAATCTAGTACATAAACAAATGGAAATTGA
TTgcgacaatatcatgtatacgaATGTCAAGTATATTGTTTATTCACTAC
CATAAGATGGATCAGAAATGATCAGGGGAACCTTATGTTTATGATATTCT
CACATTCATGCTCTTTTAAGAGCATTTCTTAAATGGTTTTcataatatct
atttttctcTTTAACTTTTAAGCTATGAAGCAAGAGATCAAGAAGCGACA
CAAAACCGAGATTGAGCATTCACAGTCAAGACCACATCAGATTCTGGTTT
ATGAGAAAAAGCATGCTGAAGAGCTGAAGGTAGGAAGAAGTGGTCCACTG
GTAGCCTCCTAACCGGATTGTTGTGGGTTTGAGCCCCATGCAAATTAACC
ATGTAACGAAGTCACCTCTCGCATCACTAACACTGGCGGGCGGCTGGCTA
CGGAAAGAACCAACCCTTAGGGTGGATGTGAGTTCAGTTCCTAAACATAA
ATCAAGTacataaaatgaaataaaatcagataaaataaataaactagGGT
AACTCTCCGGAAGCTAAAAATGACTGACTAGATTGATAGTAGGAATGCTT
TAAtaggattttttgaaatttagtacCCCAGCTCAATGTtggtattgtca
ttttataatggATTATATTGAAACCTACATTTATTTTGCTACCCACCAAC
GTTGGTGGAGATAGCTTACTGCATTATATGAAAGTTTTAAGTATAATTAT
AAATTAGTGTATTGGAGGGGTGATCCAACATTACTAGAAAGGCTATGGAT
ATGagattatttttatataaagtcgTAGATCTCTAAGTCAGTTatttgtt
ttttctgctcaGATTTTCAATGAACGAGTGGATAAAGAACTGACTCAAAT
GGATCAAAAGATTGTATTGGACTTGGATCAACAGATATCGGATCAACAAG
TCACTTTGGAGGTTCATAGTTTTTTCTGGAAGTCTTCTTTTAACAGCTCT
TATTTTTATTGTATTGTTTAGCGACCGTAGTGNGTCTTATCTGGAAGTCT
TCTTTTAACAGCTCATATTTTTATTGTATGTTTAGCGAACGTatctcagt
ggtagagcatccggctagccgggtcataccaaatattctcaaaatggtac
ttaaatcctctctgcttgatgctcagcaattaagagaaggatcaagggta
agtgaagaaatccagggagaaagagtgacgccctcccctacctATACTAC
AAGCAGGACAATAGTTTTGGTGGTGGAATGAGGTGCTCTGTGATCAGTAG
CGTAGCTAATAGGAATGCCAAATTCGTATTGGAAAAAGCGAATTGTGTTA
TAAAAATCTATTCTGCTCAAATTCTGCACaactcttggctacgctactac
TAACGTCACATGTTCCTAAGATTATTTAGTTTGACCTGTCTCTGGTTTCT
TTTTTCGTCCAAACAGGGAGTGTTGAAATatgtttgaaataaatatatat
aattaatatttttgaaactgTTCGCAAAATAGTAGTGTTTCAGCAAAGAG
ACGAACTTTTTatccaaaaatccaaatttgccCTCGTTTgagtacttttt
tatttttcctgagtaaaaagacaccaaagaTCCTCGTCTTTCAATTACTC
CTAAAACTTGAAGTGTTGTTGCAAAAAACTACTTCagtatcaaaattaat
tttaacgGATTTTTTTTGGGATTGAGTAAATGTCGTTTAAAATGGAGGCc
ctcaaaaaagttttgatacATTTCTAGAGAAGTGTGTTTATATGGATAAA
CTCTACCCgatcaaaaaaaaaagcaacaaaagaTCGTTCTTTCTTTTGTA
TAGCGTGCCGGGTTACCATTGTTCTTCATCACCAATAACCCTCAAGAAAT
TCGTATACAAATGTACATCTTGGAATTTATTGTCGGACTATCAAATTCTC
ACACAAAACCATCTTGAGGGGAGGAGATTCGAAATATTGTGAAGAGAATT
CGTTGGAAAGGTATTTATCCTTTATTTCGTTTGAGTTCGTTTTCTTTTAT
TCTATACATTGGCTCATGACAAATCATGAACAAATTGAGGCTGTTCATTT
GATTGTTAAAATAACTCGGGGAGACAATGATACGATATTGGATTGGATAA
CATTTAAGGGCAAAAGTTGCTGATGTAACCAAAAATATTCTCCTTGGAAG
TAACGCTACGTTTGATCGTTGGGAATATGCTCTGTTGAGGTTGCATTTGG
TAATCGAATGAAAGACACTTACGAAATGAATATAATAATTCATCACAGAG
GCGGTACATCATTCACAAGAGCTTTGAGAAATCATTATTTTCACGTGCTT
TCTAAAACCGGGTTTCCACAAACCCCGCGAACGGTTGGGCGCGGTGCGGT
GCGATCAAAATTTCCTTTTATAGCTCATTGACGTCacgaatgaatttttt
ttgtacaCAAAGTGTGAGCTCTATCGAGCGCAACTGAGCTCTTTTGGgag
ctgaaaattttcaactccCAAAAGCGTTCTCTGCGACCAGAATTTGATGA
ACCAATCAGAAGAGAGAAAATCTGCTGATTAAGcaaataaaatatgaaaa
tgtacAGATTGTGCGTAAATCGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029302XLOC_029302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045846-exon-scaffold_102-1491911889:365140..365184TCONS_00045846-exon-scaffold_102-1491911889:365140..365184Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:365140..365184TCONS_00045846-exon-scaffold_102-1510915933:365140..365184Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:365140..365184TCONS_00045846-exon-scaffold_102-1575043694:365140..365184Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1491911889:370472..370876TCONS_00045846-exon-scaffold_102-1491911889:370472..370876Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:370472..370876TCONS_00045846-exon-scaffold_102-1510915933:370472..370876Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:370472..370876TCONS_00045846-exon-scaffold_102-1575043694:370472..370876Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1491911889:371219..371379TCONS_00045846-exon-scaffold_102-1491911889:371219..371379Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:371219..371379TCONS_00045846-exon-scaffold_102-1510915933:371219..371379Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:371219..371379TCONS_00045846-exon-scaffold_102-1575043694:371219..371379Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1491911889:371812..371918TCONS_00045846-exon-scaffold_102-1491911889:371812..371918Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:371812..371918TCONS_00045846-exon-scaffold_102-1510915933:371812..371918Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:371812..371918TCONS_00045846-exon-scaffold_102-1575043694:371812..371918Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1491911889:372452..372550TCONS_00045846-exon-scaffold_102-1491911889:372452..372550Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:372452..372550TCONS_00045846-exon-scaffold_102-1510915933:372452..372550Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:372452..372550TCONS_00045846-exon-scaffold_102-1575043694:372452..372550Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1491911889:373443..374214TCONS_00045846-exon-scaffold_102-1491911889:373443..374214Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1510915933:373443..374214TCONS_00045846-exon-scaffold_102-1510915933:373443..374214Clytia hemisphaericaexon
TCONS_00045846-exon-scaffold_102-1575043694:373443..374214TCONS_00045846-exon-scaffold_102-1575043694:373443..374214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:365140..374214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.52547	7.02165	3.62606	4.60363	0	0	0	0	0	0	0	0	0.43167	1.31804	2.55475	2.36526	1.52481	2.35456	0	0	1.90988	0	0	0	1.62802	2.67372	0	0	0.27097	0
Blast
[Close]
BLAST of TCONS_00045846 vs. Swiss-Prot (Human)
Match: DGCR6 (Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.173e-35
Identity = 70/162 (43.21%), Postives = 112/162 (69.14%), Query Frame = 2 
Query:  410 FISMLQKMIRPIPYDYKKMLPYDIICQLAHAMLDGTVFEIANGLKDIQKITEKSLHAKRSKLVNEHKAMKQEIKKRHKTEIEHSQSRPHQILVYEKKHAEELKIFNERVDKELTQMDQKIVLDLDQQISDQQVTLERAGLPLFFITNNPQEIRIQMYILEFI 895
             +S LQ +++ +P  +++ L Y  +  LA A+LDGTVFEI  GL +IQ +TEKSL+ +R +L NEH+ ++Q ++++H+ E + +  RPH + V +     EL+    R+ +E   MDQKIVL+LD++++DQQ TLE+AG+  F++T NPQE+ +QM +LE I
Sbjct:   24 LLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQRLRLQNEHRVLRQALRQKHQ-EAQQA-CRPHNLPVLQAAQQRELEAVEHRIREEQRAMDQKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELI 183
The following BLAST results are available for this feature:
BLAST of TCONS_00045846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DGCR61.173e-3543.21Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3[more]
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