TCONS_00045844 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045844
Unique NameTCONS_00045844
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1413

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045844 ID=TCONS_00045844|Name=TCONS_00045844|organism=Clytia hemisphaerica|type=transcript|length=1413bp
gacgaaaacaaacaaaatggtatCAAAAGTAGTGATGAGAAATTTCGTAG
AGAACTTTTCGTAGTAGAGAACACAGAACTTCCAGGTACTTTCACGACGT
ACTTTCAGACTGAAAGATCACACCTTCATATCGATCATACGTGCTCCCTC
TCAAGagTATGGCGTATGATCCAAGGAGATGGCTAAATTACGACACACTC
GATGATCAAAACAATGGAGACCAAAACTATTACCAAAAACAAGAACCAGA
AGATCAATACAGAAGCTTTGATTACCAACCAACTACCACCTCAAATACAT
ACAAAACACAAGATTTTTATAATCCTACCCCAGATCCAGAAAATATTTAT
ACACCATCATTCAATGGTAATGCTTATCAACAGCCAAACAATGGATCTAT
TGTTGAGAAGAAACGAAAAGTTGACGAGTATGACCCAATGGCTCCCAGTT
TTAGTGGCTCCTCTACCAATCAGCCACCCACACCAAAGAAAGAGCAACCG
GATCCAAGAAAACTCGGCCATTTTATCAGCATGCTTCAAAAGATGATTAG
GCCTATACCATATGATTACAAGAAGATGCTACCTTATGATATCATTTGCC
AGTTAGCACATGCCATGTTGGATGGAACTGTTTTTGAAATAGCCAATGGT
TTGAAGGACATTCAAAAAATAACAGAGAAGAGCTTACATGCAAAAAGAAG
CAAGCTTGTCAACGAACATAAAGCTATGAAGCAAGAGATCAAGAAGCGAC
ACAAAACCGAGATTGAGCATTCACAGTCAAGACCACATCAGATTCTGGTT
TATGAGAAAAAGCATGCTGAAGAGCTGAAGATTTTCAATGAACGAGTGGA
TAAAGAACTGACTCAAATGGATCAAAAGATTGTATTGGACTTGGATCAAC
AGATATCGGATCAACAAGTCACTTTGGAGCGTGCCGGGTTACCATTGTTC
TTCATCACCAATAACCCTCAAGAAATTCGTATACAAATGTACATCTTGGA
ATTTATTGTCGGACTATCAAATTCTCACACAAAACCATCTTGAGGGGAGG
AGATTCGAAATATTGTGAAGAGAATTCGTTGGAAAGAGGCGGTACATCAT
TCACAAGAGCTTTGAGAAATCATTATTTTCACGTGCTTTCTAAAACCGGG
TTTCCACAAACCCCGCGAACGGTTGGGCGCGGTGCGGTGCGATCAAAATT
TCCTTTTATAGCTCATTGACGTCacgaatgaattttttttgtacaCAAAG
TGTGAGCTCTATCGAGCGCAACTGAGCTCTTTTGGgagctgaaaattttc
aactccCAAAAGCGTTCTCTGCGACCAGAATTTGATGAACCAATCAGAAG
AGAGAAAATCTGCTGATTAAGcaaataaaatatgaaaatgtacAGATTGT
GCGTAAATCGATA
Run BLAST on NCBI

transcript from alignment at scaffold_102:365030..374214+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045844 ID=TCONS_00045844|Name=TCONS_00045844|organism=Clytia hemisphaerica|type=transcript|length=9185bp|location=Sequence derived from alignment at scaffold_102:365030..374214+ (Clytia hemisphaerica)
gacgaaaacaaacaaaatggtatCAAAAGTAGTGATGAGAAATTTCGTAG
AGAACTTTTCGTAGTAGAGAACACAGAACTTCCAGGTACTTTCACGACGT
ACTTTCAGACTGAAAGATCACACCTTCATATCGATCATACGTGCTCCCTC
TCAAGGTATGATGATTTAATTTGACCTAATCTGACCTTGTCTTGAGAATA
TGTCTCCAATTGGGGTGGCTGGGTTGGTTGTAACATGGGATTGTgtatag
accttttttcaaagaggccaccctgttgaataattatgtagtccagcaga
aaaacaatgatgaaCCATGAATAATTactacaatatgcatgatacagtaa
ttatgcatggatatatcattgtttttatggctggactacataattattca
acatgacatcctctttgaaaaaaggtctatttttactttttactgtTAAA
TcactttgacaaaaaatttcttttaatacTTCCACCAAATTTATCAACCA
CACTTTTTCTGTCAAAAAATAGATACGGTATATGTCTAGAAGAGCTGCAT
CTGACAAAAGTATTCAACCAATTCACGTCATCTTTTAGTTTCGTTAAAAC
CTCTGGTTAAACAGTTACATCAATNNagagaacttcataattccccaaac
aacattacattactatctcaaactcccatcacataaattttacaattacg
tcagagtagactacgcttgccaccgaagaggtttatttggaaagggtagt
tatattttattgtttgcttcttttttaaagatttgccgggttggaaaagt
atgaatttctttgtacatattttacctaccccaaatatttaggaggctga
gttttaaacgaatcgtcaagttgaaacgNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNaatgtatcaaggtctgttttatttaccccctggtgact
taacaaaagaaacttaactcgatgttacaatccaattattgaaagtttgt
ctcggcctttttataatgagcgagacatacgttctctgattacgcaattt
tcatattgacattttcgaggcattttgatgtaactgttaaACCCCGTTAA
ACCCCTCTCTCGCTCAAGGGACTTTTAACTAACAGCCTGTGCAATGAGAT
GAATATATGTTAGCAAGAGCCTGGTTTCTAAGATTTAGTTGATGTAAGTG
GAGTGTGTCGTGCCTGTGTTGTGTTCATTACCGTGAGTATGGTCCTAATC
CGAGTATTCCGACACCCCAAATAACTAAAAACTGttataaaaaattctat
gtttacaaaccttccttctccaagttgaacgatagaCTATTGCAAtgact
ctcgaaacaaaacatctaacattATGGCTATAATAATGTCAaggtcaatt
aatgtgatcaaaaaagtgtaggaccctcccggcgctccggaaactTCCGG
AGTTTTCCggagcagctaaaaaaacactatttttctctccgGAAAGTTCC
GGAGCTCTTCCAGCGCTTCCGGAGCAAGTGATTTTAACATGttctaaaaa
aacatttaaacggctagttcgaaacacgggtcacgggtccgggtccgggg
cacgggttacggggcacAGGTCACGGGGCATGGAGTGATCGGGCAGCTCt
gatcaaagtaattcaaacagaaaatgttttaaaaacgcaaaaaattatcg
aaaaaatctATTTGAAGGTGTTTTATCCACGAATGACTATAACCACGTCC
TTTCCACGTGTTTTCGAAGTTGCGTCGTGTacaacgcagaccagaaaaca
ccgcaacatattacatacatataaCAAGCTTATATTATCAATAAATACAC
TTTTAGTGCtatatgcatgttatatgttatacgtaagtaatatacatatt
acaattcccaTCGCCTGAAAACCAAGCTTTCTCAAGAAAATAATAGTCCG
Cctattgttaaatcatatctcattatatcccctccatcaccttcagtatg
aatataattttaatggataataacgtAAAAATGATGGTATTATAAATGTG
TCAGTATTTTCCAcctaccattatgaatttttaataaaaatgacgtaatt
atactcatatctctaaaaccactatcttgcagcatttaatcgttttaaaa
catgtcaatctatatccagtcacataattagcatcctattgagtatgaaa
aaatattttgctgtaaattggttcagaggccttatatttcatgattttga
caatatttctgtcattcaatatcattttgtcaaaatttgtgggtgacata
ttatttaaaaattctcatgataatactattcgtatataattgtttcagac
aTACTATACAATGGTAGTAgtactattatatgtgttatgtagtacgtgtt
atgaacgaattatacgtcatgatatcgttttattttttccggtctgtaat
ttgtatgccCCGTGACAGTCTTTGAGGATGATGGTTCAcccattaatgaa
attgaatttgtcacattatATTCGAAAGCATagttgaaatttcgaaaaaa
taaaaaaaacgtgagGTTTCAGTGAGTCACATGAGTCGGCGCTATCGTAA
TAACATTGCGGATATCTTGCTCCAGAACGTTCCGGAGTTCCGGTGCAGAC
CAATCGGCAAAAATCGTGCTCCGGAACACGAAAAAAACACCACTTTTTGC
TCAGGACGTTTCCagagcgccgggagggtcctaaaagtgtgagttgtaaa
aatgattacctctattattctgaatccagCTGAATCTGTTGCTCATGTTT
AAGATGTTAACAATTTatgtaatgaaaaattattttttgtataagaagca
caattattgtaatttggttcaaatcaatgtgtatcaaatctttcagttta
gttgacactttggtatcttcattgcgtcacagtgaaaggtttgtttttat
tttattttgtatctTCCTATCTTTTAAAGACCatcagatttaggcagggc
tgttggaTTTAGGATCACTCACGGTATAATAAAGGAAGGCGGACATGAAT
CGCTCAATAAAATTTAGTGCATATATTTAGAAAACCACCCCCGTGTAAAG
TTAACAGATCTGAAAATATGACGCTagattttatggatttttgtaGATAT
CTGGTTTGCAGTACGCGCGTGTTTCACTacggaatttttttcatatttca
atttaaaagcctacttggtgtgaaagagaaatcatgCATTTTTTGATACG
CCGTTCATTGTCGTTCATTTAtattggaggttcggtgaaatggtggccga
attgccatcccatgttttgtcagatagtcccaagttaaagcagttgacat
TAAAAGGGCTAGTtcaaaacgcaggtcacaggtcagtgctgacaggtcag
ctttaattactgtaaaacaccaaggaaatgtttgaaaaaaaattgtcaaa
aactgtcaaaaatatcattctgaaggtatatattttattgatctagaact
tTTTTAAAGGTCAATCTCTATCCACCATGTGTTTAGTTGTGCTTACCACG
TGCTTTCGCAATATGTGCTGTGTATAACACAGACCTGTAATACTTATTAT
ATTTAATTGTAATTGTATATTACACACATATCACACATAAATagcagtta
tcttttcaatgttatgtGCATGTTACATATTTTATACacgtgttaaaata
ttattaatcTCACCTTTAACCTCACTTCCcgacaggaaaatagctatttt
gcAATCGCTATATCATACCTCCTGCAGCACCTTGGGTCTGataacaaaaa
ttaatgaaaatagcGTCAAAAGggttatattttataaatatttcaatatt
tttatcccctgctttgtCATAGTTTTATAAGGGGGGTACGATGGCCCTGA
AGGCTCAtaatttctcttcaaaaaacAACCGGAGTTTCCCAAAATCAAGC
TGGAGTTTCCCAAATTTTAGACAGAGTTTCCCAAAACCAAGCCAGAGCTT
CCCAGATTAAAAGGGGGTTTCCCAAATTTTAGATGGAGTTTCTCAAATAC
ACGGGCTGTAAAATTATATCGAATCAAGtacaatgcagtcaaaacatgtg
attactcaaaaaagttcacgtgatctTATTCCCATGTTAATTAATTGctt
tacagctgataactttgttaatagtgtcaataaattcgaaccaatcagaa
ataaatgtcatgtaacaagcacataaaaatgtagaaactaaaaaaaattt
gggaGACCCCCAGCTTGATTTTGGGAAACTCCGTCTAAAGTTAGAGAAAC
TCCGGCTTGGTTTTGAGAAACTCCGTTTAAAATTATTGGGAAACTCCGTC
TAAAATTTGGGAAGCTCTGACTTGGTTTTGGGAAACTCCGTCTAAAATTT
GGGAAACTCCGGTTGTTTTTCGAAGAGAAATTTTGAACCTTCAGGGCCAT
CGTAGGGGGagttttttcttcagaaaatgggaaaagtgtgggcaaaattt
ttttcaaaattctaggGTGGGGGGAAACAAAAGTAAGGGGAGAAAAAATA
GCTCCAAAAAGTCTAGGTTGGGGagaaaaaatctgaggaaaaaaattttc
tgttctcTGGTGTCaaacataaaacataaaatatatctGTTCAACTTCAA
GCTAAAAACATGTAATAGTGTTTTATATTTGAGGTGATGacaatttacat
tttttctttgtatatagGGACGAGATAACATGAATAGAAGCAGTATATTG
GGGCAGANCGAGGTGGTGacaatttacattttttctttgtatattaTAGG
GACGAGATAACATGAATAGAAGCAGTATATATgggacttttttcaatttt
caagggagGGGAACCAACCGACTAGGACACTatgtttgtatttttgatga
aaatgacgtcatcattttcgtatctctaaaacagctgtctaggagcattt
aatgttttcaaaacatatCAATTTGCACTGTTGACCTattgacctgttga
cctgtgacctgcctTTTGAACTAGCCggaaaacaattgaaattcaacaac
aacATTTTTAGTTCAAGGTGACTCCTGATCTTTGAGCTTTGGATGTTTAA
TATCATACATAGGATGGGATCACTGTATTGATATTTTGAATGTATGTTCT
TGACTCTACAGCATTCAAAGCCAACAAacagtaaaaatgaaaaatgaaaa
tctaaatttgTAGAAAAGAAATCTCCAACCAAAACCTCCAGTAAAATAGT
ACTTAAAACTGACCATCGTATTCAGCTGCAGTGCAGTTAATAAATAAAAG
ATGGATCAAAGCTGTTTTTGAAGCTCAAGAATTTATCTTTCTTTTAATAT
AAACTAGAGGAGTGTACTATatatcttttattttctttagagTATGGCGT
ATGATCCAAGGAGATGGCTAAATTACGACACACTCGATGATCAAAACAAT
GGAGACCAAAACTATTACCAAAAACAAGAACCAGAAGATCAATACAGAAG
CTTTGATTACCAACCAACTACCACCTCAAATACATACAAAACACAAGATT
TTTATAATCCTACCCCAGATCCAGAAAATATTTATACACCATCATTCAAT
GGTAATGCTTATCAACAGCCAAACAATGGATCTATTGTTGAGAAGAAACG
AAAAGTTGACGAGTATGACCCAATGGCTCCCAGTTTTAGTGGCTCCTCTA
CCAATCAGCCACCCACACCAAAGAAAGAGCAACCGGATCCAAGAAAACTC
GGCCATTTTATCAGCATGCTTCAAAAGATGATTAGGCCTATACCATAGTA
AGAtcgataaatatttttgttgtcttggtatatatttttatgCTAACGTC
AGTAACATAGTTTGTTTTGTGTTTGGGATTAATCTTTGCCATATGCGGCT
AAAGATAAACCATTACTCAGAATTTTATGCGTGTTGTGCTTTTGATGTTT
GAGATATTATGGGGCTCTATTTAAAAAATAGAACAAGATGTACAAAGGAC
TCACTGTTGATGAATGTTATTACTTTTCGCTTTGACATTCtcaaaaatct
tttgctttttttaagaatgtttgcaaaaagattttgcaataaaaaattga
aacaaattgTTGATGGTTTTTGGCTTTTTATATGTTCAGTGATTACAAGA
AGATGCTACCTTATGATATCATTTGCCAGTTAGCACATGCCATGTTGGAT
GGAACTGTTTTTGAAATAGCCAATGGTTTGAAGGACATTCAAAAAATAAC
AGAGAAGAGCTTACATGCAAAAAGAAGCAAGCTTGTCAACGAACATAAAG
GTAAAAACTCATGTCAGGGCCATTCCAAGAAAATGTTAACCCTATTGTAG
TCTATGCCCGATATTGAACCATCTCGTATGAAGCGCTCCTAAAACCCTCC
CTATTGGTGTTTGCAGTTAGTAAAAAAGCGTGAAAGAACGTACCTCTTCA
TCTGGAATAGCTACATAGTTGTTGAGCTTTCAAAATCCTTTTCGTATTtc
tttcagttttcattttgtaattaaaaaacgAAATCTAGTACATAAACAAA
TGGAAATTGATTgcgacaatatcatgtatacgaATGTCAAGTATATTGTT
TATTCACTACCATAAGATGGATCAGAAATGATCAGGGGAACCTTATGTTT
ATGATATTCTCACATTCATGCTCTTTTAAGAGCATTTCTTAAATGGTTTT
cataatatctatttttctcTTTAACTTTTAAGCTATGAAGCAAGAGATCA
AGAAGCGACACAAAACCGAGATTGAGCATTCACAGTCAAGACCACATCAG
ATTCTGGTTTATGAGAAAAAGCATGCTGAAGAGCTGAAGGTAGGAAGAAG
TGGTCCACTGGTAGCCTCCTAACCGGATTGTTGTGGGTTTGAGCCCCATG
CAAATTAACCATGTAACGAAGTCACCTCTCGCATCACTAACACTGGCGGG
CGGCTGGCTACGGAAAGAACCAACCCTTAGGGTGGATGTGAGTTCAGTTC
CTAAACATAAATCAAGTacataaaatgaaataaaatcagataaaataaat
aaactagGGTAACTCTCCGGAAGCTAAAAATGACTGACTAGATTGATAGT
AGGAATGCTTTAAtaggattttttgaaatttagtacCCCAGCTCAATGTt
ggtattgtcattttataatggATTATATTGAAACCTACATTTATTTTGCT
ACCCACCAACGTTGGTGGAGATAGCTTACTGCATTATATGAAAGTTTTAA
GTATAATTATAAATTAGTGTATTGGAGGGGTGATCCAACATTACTAGAAA
GGCTATGGATATGagattatttttatataaagtcgTAGATCTCTAAGTCA
GTTatttgttttttctgctcaGATTTTCAATGAACGAGTGGATAAAGAAC
TGACTCAAATGGATCAAAAGATTGTATTGGACTTGGATCAACAGATATCG
GATCAACAAGTCACTTTGGAGGTTCATAGTTTTTTCTGGAAGTCTTCTTT
TAACAGCTCTTATTTTTATTGTATTGTTTAGCGACCGTAGTGNGTCTTAT
CTGGAAGTCTTCTTTTAACAGCTCATATTTTTATTGTATGTTTAGCGAAC
GTatctcagtggtagagcatccggctagccgggtcataccaaatattctc
aaaatggtacttaaatcctctctgcttgatgctcagcaattaagagaagg
atcaagggtaagtgaagaaatccagggagaaagagtgacgccctccccta
cctATACTACAAGCAGGACAATAGTTTTGGTGGTGGAATGAGGTGCTCTG
TGATCAGTAGCGTAGCTAATAGGAATGCCAAATTCGTATTGGAAAAAGCG
AATTGTGTTATAAAAATCTATTCTGCTCAAATTCTGCACaactcttggct
acgctactacTAACGTCACATGTTCCTAAGATTATTTAGTTTGACCTGTC
TCTGGTTTCTTTTTTCGTCCAAACAGGGAGTGTTGAAATatgtttgaaat
aaatatatataattaatatttttgaaactgTTCGCAAAATAGTAGTGTTT
CAGCAAAGAGACGAACTTTTTatccaaaaatccaaatttgccCTCGTTTg
agtacttttttatttttcctgagtaaaaagacaccaaagaTCCTCGTCTT
TCAATTACTCCTAAAACTTGAAGTGTTGTTGCAAAAAACTACTTCagtat
caaaattaattttaacgGATTTTTTTTGGGATTGAGTAAATGTCGTTTAA
AATGGAGGCcctcaaaaaagttttgatacATTTCTAGAGAAGTGTGTTTA
TATGGATAAACTCTACCCgatcaaaaaaaaaagcaacaaaagaTCGTTCT
TTCTTTTGTATAGCGTGCCGGGTTACCATTGTTCTTCATCACCAATAACC
CTCAAGAAATTCGTATACAAATGTACATCTTGGAATTTATTGTCGGACTA
TCAAATTCTCACACAAAACCATCTTGAGGGGAGGAGATTCGAAATATTGT
GAAGAGAATTCGTTGGAAAGGTATTTATCCTTTATTTCGTTTGAGTTCGT
TTTCTTTTATTCTATACATTGGCTCATGACAAATCATGAACAAATTGAGG
CTGTTCATTTGATTGTTAAAATAACTCGGGGAGACAATGATACGATATTG
GATTGGATAACATTTAAGGGCAAAAGTTGCTGATGTAACCAAAAATATTC
TCCTTGGAAGTAACGCTACGTTTGATCGTTGGGAATATGCTCTGTTGAGG
TTGCATTTGGTAATCGAATGAAAGACACTTACGAAATGAATATAATAATT
CATCACAGAGGCGGTACATCATTCACAAGAGCTTTGAGAAATCATTATTT
TCACGTGCTTTCTAAAACCGGGTTTCCACAAACCCCGCGAACGGTTGGGC
GCGGTGCGGTGCGATCAAAATTTCCTTTTATAGCTCATTGACGTCacgaa
tgaattttttttgtacaCAAAGTGTGAGCTCTATCGAGCGCAACTGAGCT
CTTTTGGgagctgaaaattttcaactccCAAAAGCGTTCTCTGCGACCAG
AATTTGATGAACCAATCAGAAGAGAGAAAATCTGCTGATTAAGcaaataa
aatatgaaaatgtacAGATTGTGCGTAAATCGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029302XLOC_029302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045844-exon-scaffold_102-1491911889:365030..365184TCONS_00045844-exon-scaffold_102-1491911889:365030..365184Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:365030..365184TCONS_00045844-exon-scaffold_102-1510915933:365030..365184Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:365030..365184TCONS_00045844-exon-scaffold_102-1575043694:365030..365184Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:370470..370876TCONS_00045844-exon-scaffold_102-1491911889:370470..370876Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:370470..370876TCONS_00045844-exon-scaffold_102-1510915933:370470..370876Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:370470..370876TCONS_00045844-exon-scaffold_102-1575043694:370470..370876Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:371219..371379TCONS_00045844-exon-scaffold_102-1491911889:371219..371379Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:371219..371379TCONS_00045844-exon-scaffold_102-1510915933:371219..371379Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:371219..371379TCONS_00045844-exon-scaffold_102-1575043694:371219..371379Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:371812..371918TCONS_00045844-exon-scaffold_102-1491911889:371812..371918Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:371812..371918TCONS_00045844-exon-scaffold_102-1510915933:371812..371918Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:371812..371918TCONS_00045844-exon-scaffold_102-1575043694:371812..371918Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:372452..372550TCONS_00045844-exon-scaffold_102-1491911889:372452..372550Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:372452..372550TCONS_00045844-exon-scaffold_102-1510915933:372452..372550Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:372452..372550TCONS_00045844-exon-scaffold_102-1575043694:372452..372550Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:373443..373599TCONS_00045844-exon-scaffold_102-1491911889:373443..373599Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:373443..373599TCONS_00045844-exon-scaffold_102-1510915933:373443..373599Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:373443..373599TCONS_00045844-exon-scaffold_102-1575043694:373443..373599Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1491911889:373888..374214TCONS_00045844-exon-scaffold_102-1491911889:373888..374214Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1510915933:373888..374214TCONS_00045844-exon-scaffold_102-1510915933:373888..374214Clytia hemisphaericaexon
TCONS_00045844-exon-scaffold_102-1575043694:373888..374214TCONS_00045844-exon-scaffold_102-1575043694:373888..374214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:365030..374214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.859047	0	0	0	0	0	0	0	0	0	0	0	0	0.0859211	0	0	0	0	0	0.0684242	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00045844 vs. Swiss-Prot (Human)
Match: DGCR6 (Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 8.507e-36
Identity = 70/162 (43.21%), Postives = 112/162 (69.14%), Query Frame = 3 
Query:  522 FISMLQKMIRPIPYDYKKMLPYDIICQLAHAMLDGTVFEIANGLKDIQKITEKSLHAKRSKLVNEHKAMKQEIKKRHKTEIEHSQSRPHQILVYEKKHAEELKIFNERVDKELTQMDQKIVLDLDQQISDQQVTLERAGLPLFFITNNPQEIRIQMYILEFI 1007
             +S LQ +++ +P  +++ L Y  +  LA A+LDGTVFEI  GL +IQ +TEKSL+ +R +L NEH+ ++Q ++++H+ E + +  RPH + V +     EL+    R+ +E   MDQKIVL+LD++++DQQ TLE+AG+  F++T NPQE+ +QM +LE I
Sbjct:   24 LLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQRLRLQNEHRVLRQALRQKHQ-EAQQA-CRPHNLPVLQAAQQRELEAVEHRIREEQRAMDQKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELI 183
The following BLAST results are available for this feature:
BLAST of TCONS_00045844 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DGCR68.507e-3643.21Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3[more]
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