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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045837 ID=TCONS_00045837|Name=TCONS_00045837|organism=Clytia hemisphaerica|type=transcript|length=2285bp
GCCGAATATCCGCCATTGGGCGGCATAAATCGCGGAGCTGTTGATTGGCC
AAAAACTATTTACTTTCGTCAGTGTGAAGTACCAACAAGTTTGCAGTTTT
ACTGCGATTTCTAGCCGGCTGGAGAAGTGTTTGTGGACAAGAAAAAAAGG
ATTTACCACATCATCACAAGACCGAGTGTATGGACACGACTTAATCTTTG
CAGACTCTACTAAACCCATAATGAAGCAAGTTCAACAGATTCAGACTCGA
TCCACCcaacaatttcaatttcaacaaaatcaaTCTTTGCAATTTCAACA
ATTCGAAGAAGGATTTCAACAATTGATTTTGGCTGCACTTCGATCCTTTG
ATAAAACTACTTCTGACTTCTCAGACCCTCCCATATCTCAAGACGACACC
CTTTAGAACAATAACGAAATGGTAGACCCAGCACTTGTCCAGTTTCTCGA
TGATTATTTAAACTGTGAAAATGATGAGAGTCTTGAACCTCCTGAATGTC
TTAAAAACAAGAAACTATCCAACAAAGATCTCTTAACCGATGTCATCGAA
GAGCTAGATGAATATAGCCGCCACCGTGTGCTGATCAAACCACCCTTGTC
ACCTGATATTTCTGATGTCAGTGATTTATACTTGGAAGATTTAATCAAAa
tccaagaaaaattgaaagagaaCTCTGATGAATCTGNGTGATTTATACTT
GGAAGATTTAATTAAAatccaagaaaaattgaaagagaaCTCTGACGAAT
CTTCTGCTGAACTTAATAAAGAagttaaaattgattttgaagttGACTCT
GAAACTGTTACAACCAGTAATAAAAATGAGACGACATCTTATCTGGATTG
TATGGCTGAGCAGCAATACCCAACTTCTTCTAATGATGAAGAAATGCTTG
CCAGAACCATTGCTGAGTTAGAATCAAAAGTATCTTCAGAACCTATTTTT
GTCAACTCTGTATCAACAATGTCAAATACAGAAGAATTGAAAGTTACAAC
AGGCCTTGTCTTGGCTAGTGGAAAATCAGTCACGAATGTGGAAACAACTG
AGGGCCAAACTTTCACTGATCTACACTCAGTTAATCTATCCCCCGAGGAC
GATATATGGAATTTCGTTAATAAAATCAATGCATCGAATTCACCATTACC
AGCAGATTCAACAGGAACCACATCGACCACTTTGAATGTTGGTAAAAAAC
GGACCTGGAGCCAAATGGTAGAAGAGGCAGCTGAGGCTTGGAGTTCTGAT
AAAGCTTTGCCACAGATTTCCATCAAAGGTCCTGAAGATTTTGAACCATT
GCTTATGGAGGCAGATTCAACAACTAGCGAATCCGATTCTAATGTAAGTG
AATCAACAAACCCTATGACAGGATTTGATGGTACTGATTCACCAAATTCC
AACACAGATGGAGAGAGTAAACCAATCATAAAGAAGGAgattcgaaaaaa
gaaaaacaacgaaGCTTCACGTGTTCACCGTGCCAAGAAGAAACGAAAAT
ATGAAGAGTTATTCGATAAAAAAGTCGAGTTAGAGAAAAGAAATGCGGAG
TTACAGATCCAAGCTGAGTCAATGCAAAAGGAAGCTGAATTCTTAAGAGA
GTTGTTATTGGTTAAAGTTGCCGCTTCATCGAAACCTTGAAATGATTTTA
TTATGTTATGATAAAAGTTACCAAGAAAATCATACTGAACTTTTCCTAGT
TTCAAGGAAATCTGGAATCATTTTGAAGCTCCTGTAAATAAGGAAATTAA
CTATGTGGTAGAGTTTAACACTGAAAGTTGTTGGAATTTTCAAACTGAAG
ATATAAATCTCATGAAGAAAATATTATGGCATAAACATTATACATTAATG
ACAAGAATTTGAATCAGGACTTCGATTTCAAAATACAAAAGACATTttca
aattggaaaattttaatcaaaaaggACAAAATTTATATTAAGtcccattt
tattgaattttagtGATGGGTCTACCAATTCGTCAAATTGTAaatatcat
ttattttttatcaatgttGTCTTTTTTGTTTATGTCACTTATAATTCGAT
ACATCACATTATTTTGGCAGCATTTATCtcgaaaagttttgttttaatAT
CATTGAAGTTGTACTGAAGATGTTCCTTCGACTATTTATTTACTTAGTCC
CCAAACTGAAACATAtatatttccctaaattttattttgataaattttga
agaaatgtcgtcatctttaatttttaaataagaacaatttaatttCAATC
CAAGGCAAGAAAATACTACTTTTTCGACATTTACc Run BLAST on NCBI protein sequence of TCONS_00045837-protein >TCONS_00045837-protein ID=TCONS_00045837-protein|Name=TCONS_00045837-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MNLXDLYLEDLIKIQEKLKENSDESSAELNKEVKIDFEVDSETVTTSNKN
ETTSYLDCMAEQQYPTSSNDEEMLARTIAELESKVSSEPIFVNSVSTMSN
TEELKVTTGLVLASGKSVTNVETTEGQTFTDLHSVNLSPEDDIWNFVNKI
NASNSPLPADSTGTTSTTLNVGKKRTWSQMVEEAAEAWSSDKALPQISIK
GPEDFEPLLMEADSTTSESDSNVSESTNPMTGFDGTDSPNSNTDGESKPI
IKKEIRKKKNNEASRVHRAKKKRKYEELFDKKVELEKRNAELQIQAESMQ
KEAEFLRELLLVKVAASSKP Run BLAST on NCBI transcript from alignment at scaffold_102:270359..289007+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045837 ID=TCONS_00045837|Name=TCONS_00045837|organism=Clytia hemisphaerica|type=transcript|length=18649bp|location=Sequence derived from alignment at scaffold_102:270359..289007+ (Clytia hemisphaerica)
GCCGAATATCCGCCATTGGGCGGCATAAATCGCGGAGCTGTTGATTGGCC
AAAAACTATGTAATGATCTATTCTTAGAAACGATtgcatcaaaacaaaat
tgaaatcgaaagtagTCAAAACAAAGTCACAAGACTGttctagaaatttt
tttttgccagtCAGAAAGTTTGTAGTGTacaattttaatatttattcaCT
GAACTTTTATTCACTTATTAGTTACTTTCGTCAGTGTGAAGTACCAACAA
GTTTGCAGTTTTACTGCGATTTCTAGCCGGCTGGAGAAGTGTTTGTGGAC
AAGAAAAAAAGGTTGGATTTTTTATATTCATCAGATTTCTTTCCAGCTAA
TCAAAATCAAAGTTGCAATATTTTGCCGACTCCAATTTCTACCAAGCTCT
CTCTGTTATTGCATACTTCATATACTGATAAAGTTGCTCAATGTTGATAG
ATTGACTCCAAAAAAACCCAGCAAAAACAGCtttgtatagaccttttttc
aaagaggccatcctgttgaataattatgtagattcaacaggacgtccttg
catcagtggagggaaacttgcatagacATTAAATGGCTGACCAATCAAag
aagcaaaatttcaaaacaatgatctatgcagctccgctcgcagctctact
ctaccatttttgttttgatttaactttcttttttaataacCAGCTAGGTC
ATTcgtttgagggctatgcatgttagcctccactgatgcaagttaccaga
tCTTACgatatatcaggattagaaactaggctagtcttacctcttttatc
tttccctttacaacaatacaatgctgataagttgacacaacacattgaca
agcaCAAGTAATCCTTGTAGAGAGAAATTTATATCGAAATTTGcgacaaa
aacaaaagtggtctcttctactgattgcttgcTAGCGCTCgtttgcagct
gtttatcaaatttccaccaatgagattatatttgtttcaatccagGATCC
TAAAGCTtcggttttttctcatctttaatTTATTGaagaaagcaggaatt
tgatgcaagagttagattgtcaacaaagtgccataaaaaatcattgaata
aaagaagaacttaaaatgttagatattttcattttgaagaattggcggtg
caaaaaagtaaaacatagaaaaagtttcatttttcattgcattaatcaaa
atgagggatttggaaaattttttatgttttttgcacAAACTGTAACTATA
GATGTTTTGGCGAACGggacagtcttttgaataactaattcaCACATACA
TTTCTTTCCCTCagtcaataaaaacatgataaattatcttgtcttttggt
aactgctgtggagtaattagttattcaaaagaccgtcGCGTTTGTTCAAC
TATTGGTAAGCACCccattgctaagatgttggcttgaaatcgaaaatgaa
accactgaaaacaaaagtaaaattggCGCAGACTctaaatcccgtaatct
tgatatacaagtttaagtctagactgacaagacattgaaaaatcaataaa
agCTCACTTCTTCACAGAGTTTCAAACTTCAATAAGGTCCCCCATCTAAC
TCAAATATACTTGTTTCTAAATCCTTACAAaccttatttttttcaataat
tcaatttttagaaaatttcggAAACTTGAAGAAGTTGGCCCAAATTTGGA
GGAAGAGGGAGATTCAAccatttttgcaactttttgCAAAATTCATGTAT
TCctaatcttcttttttgaacatttttaagtGTGTTTTGAAATTGAACAC
TCGTTATCTGTTTCctttgcattttgaaatatctaatcaaattttcaaag
ccaTTCACAGTCTTTCAAAGTCATCCTCGAATGTCTATGCCTGATTGCTA
GCCACAATGGCTAATGTACTCCAAACATGAGAATTGTTTTACACAATACT
CTTGACTGTGGTAGATTTTAGCAATGTAAGATCTTCTTTCCTTGCAAATA
GATTAAAAATCGCTTTCGATTAGATTTCAAAATAACtattctttatattt
tttaagacAGAGAGAGAgcaatttttcttgaaaaatcaacttGGCGAAAG
TAGCAAAAAATTACTTTAGTTAATTTTCTTAGAACATATAAAAATTGTCT
AAtgtaattttccttgaaaatacaagaaactgtattggttgatcttcctt
ggaaagtaccgggtgcaccacaaaaaagtttctctctttaaaactaattt
tctcaaaatctaaaaattttaaaagaaccgttcctatttcattggaaaga
aaaaagataaacttaaattttgatgggtcatttattaaattcgactcatt
tattaaattcgactCATTAgatcaaaaaaatgtttctttctgaaaatgct
caaaaacattaaaaatcgacctatcaaatgaAACAGAAGCATGATTATTC
AATACATCAGTactttcgtttcagtcattaagaATGATAATTAACTGTGT
AAATGACCcttgttatttaaaggaaggttaaatttcaataaaaggcagaa
aattcgtcgaaaaaggcaaaCAAATCTGgtaaaatacatcaaatatgggt
ttcgaggtacatccagccttacatagactttatatccaagtctagaacca
aaaatctgaggaaaatatcggtaaaagtaaatgaaagtgattttgattaa
gattttaaacccttatgGACACTTCAGTTTTGAAATTTAcgtgtttaatt
actgaaaaaggcttttaatcaattaaaggCTATTGTGATtgccaattttg
aaataaaaatttgataggtcgatttttaacgatttcgagcactttctgaa
agtaacttttttattcaattgagcataacttctgatttaatgaatcaaat
tcaataaatgacccatcaaaatttaagtttatctttcttctttccaatga
aattggaatggttcttttaaaatgtttagatttcaagaaaattaatttta
aagagagaaacttttctGCAGTGCAACTAGTACAACAATTTGCTTTAGGT
TTTAGGTCCTTGCCAAGTACAAGAAATGATATGATTTAagttaattttcc
tttgaaaatacaaaaaaattatttttatttaaaattttcctcAAATGTGT
AAGAAATTTTCTCTGCTAAAatcattttccttgggaaatacaggaGAATG
TTTTAATCAGCATTCCATTCAAtatacaagaaaatatttttgttcgattt
ctcttaaaaatttataaaataaatttaatttctcaaaTAACAAAGAGTAA
ATTAGAGTAATTATCATGATAAAGGGTCGTCTTGGATGACGCCTGGACAT
ATAATACATATAATACCTAAAAAATGGTCAAGATAGTAAATCTGTTTAGG
CACTCTGTAGATTAGTGCCCAGACACTTGGATAACGAAATTAGTAAAGAT
AAACATTAAGCACGAAGAGAAATTGATCAGCTATTAGgttattattaaaa
ttttcaattggtaAGCATGAAATGGGTTATTTAATCACAAAGTTTACACA
GAAGGCAAAAActtcaataaaaaattcaatttccttTTCAATTGCAGATT
ATGCTGCTACTAGAATAAGCTGTTTCAGATATTTCTCACAGAATTATGAA
TAagcctaaaattgaaaatacttttTGATTCCTTATTCTCATATATTATT
AAACATACTGATGttgtcaaaaaagttttaaattttgtcATCCAGTATTT
CAATTAATAGTCAACAAAANAATTGCAGATTATGCTGCTACTAGAATAAG
CTGTTTCAGATATTTCTCACAGAATAATGAATAagcctaaaattgaaaat
acttttTGATTCCTTATTCTCATATATTATTAAACATACTGTTGTcgtca
aaaaagttttaaattttgtcATCCAGTATTTCAATTAATAGTCAACAAAA
TTTGGTTTTAATTCAATTAATTGAATTTATTACCATTTTTCAATAAATAT
GCCATAAAAATCATCTTTTAAGGGTGTTTTTGCATATTTCATAATATCAG
AATAGAATTTTTAGCCGATATCTgcttaagagccagtttttttaagaatg
gggcagtttggggcagttccaatagtttgaaacttagatttttttcattt
ttggatatgttgttaagtacaatgaactNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTGAGTACCCATTGCtacttgattcttg
attttgtgaaagcatcctatagatagttcaagaatttatcagaagttgga
accttttcttttcttttaaagattagagctagctcaaagtcagttttaac
tctaaaatcctaaaaagcttgacaatgttgctcaaaacaacaatttttga
tcaagattgaacagaaaatgagcccactcagataataaaatcttggtttt
tggaaagtttcatggggataatacaaacattcatcaagatctttacctcc
tgatctaccatttaaggatcaagtctgtcaaaatgtgctTCTAAATTCTC
AAATCTTTAAAGGTGGACTTTACCAACCCCATAACACAATTTTGCTATCA
GCCTGTTTGCTCTTAAATGCAGTTAATGAGCCCAAAGTTCAAATTATCCA
AAGAGAAGGAAAGGTTTAGGAATTTTGTACTTTTGGACTTATCTCTAATT
ATTTAAGGGCAGAAAGGTTGAtggcaaaattgttttatggggttggtaaa
gttcacctttgaagatttgagagtttagaagcacattttgacagacttNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTAAATGGTAGATC
AGGaggtaaagatcttgatgaatgtttgtactatccccatgaaactttcc
aaaaaccaagattttattatctgagtgggctcatttcctgttcaatcttg
agcaaaaattgttgttttgagcaacattgtcaagctttttaggattttag
agttaaaactgactttgagctagctctaatctttaaaagaaaagaaaagg
ttccaacttctgataaattcttgaactatctataggatgctttcacaaaa
tcaagaatcaagtaGCAATGGGTACTCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNggattttactcagttcattgtacttaacaacatatcca
aaaatgaaaaaaatctaagtttcaaactattggacctgccccgctcttaa
aaaaactggctcttaatcCAAGAGAGAATACAATCTAAAAAGGGTTTCTG
AATAAAGAttcaaatgtttttgatttaattagtgttttatTTATTAAATA
GGGATAAACTTTTTCAGTCATAGCTTTAAAAGATTTGGtaataattataa
gaattatTTCACTTGTAAAACCTTTTTCCACCTTTAGCTCTTCGATATAC
CTACTAATTTGATTTTAGATATCAATCTTAGGGCTAGATTATGTAATTAC
AAGTAATTGGTCAAAGTGTTGAATTTCAGTTTGAATTCATCTTTCTCAAT
CTCAATTGCAGAACTCttcacaaaataaaacaaaattctACCTATATATA
AAAGTTTGTTTCAAAGGATAAAGAACCTGACTAAAAAACCtctcaaaaaa
tctttttactaaACCTAAGGTTAAGAAAAGTCACAAAAGCATCGATTTTG
GATATAGTAAACTTTCAATAAATTTGATCTATCTTATTTCAGGATTTACC
ACATCATCACAAGACCGAGTGTATGGACACGACTTAATCTTTGCAGACTC
TACTAAACCCATAATGAAGCAAGTTCAACAGATTCAGACTCGATCCACCc
aacaatttcaatttcaacaaaatcaaTCTTTGCAATTTCAACAATTCGAA
GAAGGATTTCAACAATTGATTTTGGCTGCACTTCGATCCTTTGATAAAAC
TACTTCTGACTTCTCAGACCCTCCCATATCTCAAGACGACACCCTTTAGA
ACAATAACGAAATGGTAGACCCAGCACTTGTCCAGTTTCTCGATGATTAT
TTAAACTGTaagtctttttcatttaaatctTCCTCTAAATAATCTGCAGT
GGAAACAAAATTGattgtaacttttgatcaaatttGATATTCAGGAGTGA
AATATTATGGAATAGAAAATAACCGGaaataaagataagaaaaaataaat
gaaaaactaaCTTCCTGAAGAAAGTCACCATTATCTCAAGACTAATTCTT
TAATCTTAGAGCATCGTCACTgtgaaaagttttcaaatataCTCATTAAA
TTGAAAGATATAACAGCCCGAAGTTTAATTGACTtctaaaataatagaaa
aatcgtcaacaaagttttgaattgaattttttgtGTGACTAAAGGCCCCC
CAGTAGTTTGAacgaatgcgtgaattggattTTTCACTTTCATGAATGTG
CAAACTGGGAGCTCaataaattaaaagtttttactaCCAGAATAAAAGAT
TTATCGATATGAAAGTGGTATTTGTAGCATAATTCTACATAAATTCAATT
TCCTTCTTCTACACTTTTGATCTTCATTTcccgaaattttctttttgata
atattcaatACCTGAATGTTTATATGTAATCCTCTGTCTAACTTGAATTC
TATCTTAAATCCAATCCAAATTTGAGCCCTATTGAGAAGCATGCTAAAGC
CTTTGCCATCCTGcgatttttttaaagcaaactaaacaatatgaaaaatt
acattctattttttaaatcaaattaccTTCTTTATCTTATAAATGGGTCA
TCACTGAGATAGGTCTTGGAGATTTTGTAACGATAACtaaacccctgtct
caaaacCCTGGTGAAATATTCCATAGCGGGGATAAAAACTTCTATTGAAT
Tctaatggggataaaaattctattgttccaaggttaaaaaatcaaatggg
gatggttttagagtgcaattaTTACACATTTCATACGGGgatgaaattaa
agtcaattttccagtggggctgaaattctatgATATTTTTCTCATCTCGG
GGACCAAATTCTTGCCAAATCTTTTCAGTGGAGATGGGACTCCAGTGAGT
CTGCGACGACGTAGGGGTGTATAACTCCATCAGCCTCTAGACGGCGAGAA
TGCCCAATTTTCGATTGCACATGGCTGATTCAGTCCTTTATACTTCAAGC
CAACGTATCATAAATGTCATAAATCAACTATAACTCCTCCATTAATACCA
AAACTTAAGTCTAACCCAATCGATCTTGGATAATTTCTTAATAAGGCATT
TGAATGATATATTGTACAGTTGTCATTTTCCCCATTGGTATAAAgtgtga
aattaaaaaaaaactaacctaaaaaacattgtttaaggtgtgacacccct
gtctcacaggcctggtggaacttttttcctcatcggggatagaaattcct
attgaaatcccaatggggacagaaattctattgttcaaaggttaaagata
gtccagtggggatggttttgaagtacaattttcaaactttaaaaatttta
aatatcgAATGGGGATCAAGTTAAAGTCAATTtcctagtggggctgaaat
tccagagcattcttccaccggggacgaaattttcgcCCAATTTTCCTGTG
GGGCTAGGGTCCCAGcgggtttgtgacacaggggtgtgatgTGGCTTTGC
GATGTATTTTGAATTATTTCGAATAACTGCGAGTATCGTTCAGGTGTCTA
AACGGATTAAATAggtaaaaattgattaaaagtTATAAATTCCAATAAAC
AGGAGGTCTCCCTGATTGCCTGGGGAGATGAAAATTACTCTTCTAAATTC
CTTAATAATAGACTTacataaaatgaaatgaaaatgaaaaattatcaaaC
AGGGGGTGTTTATTAATGTACGCTGAGACCTGAGGGTGCTGTCAATAAGG
TTTACAAAGTTTGTATGATTCTGATGAaacttttccaccaaaaatatttt
tattctgaCATCTTGCTTATGTAAgggaaattgtttttgaaagttagatt
tttttgCCTTATTGTTCTGGCGTGTTCTGTTTTATGctgtttttaaatta
ttttttccaccTACGCATTTTTTTATACACACCTGTCTCATAGCCCCGGc
cgaacttttttcctcaattgggataaaaattcctattgaaatcctaatgg
ggatagtaattctattttttcaaggttaaaaaatccatttGGGCATGGGA
CATTGATTTCGAGTTGGGATGAAGTCAaattcaatttcccagtggggctg
aagttccaggatattttcccaccggggacgaaattttcactaaattctCT
AGTGGGGCTGGTGTcctagcgggtctgtgacacaggggtgtttttatata
aggacaaagtatataagaacacaagggcTAAAGTTTAAgcgaacatttta
aggctttgcagtcTCTAGAACATACAACATTTTAGataattacatcaaaa
tgctaaaaatgagaattcttaggcttaaaaaactcaaaagaaatcaaaaa
tcttataaaaataaaaagtgtaTGGTATTTTATTGGAGCCCTtcttcttt
tctaatgagttttTTTCCAAGCCTCGCTGTTTATACCATTTTTCATGTAC
TTGTGACTGCAGGTAGAAGATGAGTTCTTTGATACAAAGTTTCACATCAT
CACAACAGTTCAAAGTTATCTGGGAATTCtcagaaatcgaaaaattgtaa
TTCAAGGTTCAGAGGTCACTATACTCCAATTTCTTACAGCGTCATTTCTG
CCATTTTGACATTATGTcaataaaatatatacaaagAGTTTCCTCTTTTA
TTGAATCCAACGTAAGTAATCAATCGTCCTGACAGAAATACAAATATTTG
TCGCTCCTATGAGATAAAAGGATTAAAGAGGTTTGAAAAGGTATATAAAG
CCTGCTCAGCCAAAAAACTGCATAAATCTGCAAAAAATTTAATCTTGGTA
TGGGAAAAGATTGCAGTGTCCATGACgtcaaatcaacaattttaagataa
aatgaaagaatagGAGATGTAGAAAATCTGATAATTAACCTCTTGACCTT
TTAGCCGGAGTCAAATATAAATAACTTTGTAAtgaatttttaatcttttt
gatTGAGTTGTATCATTAATCCGGTACACATTACAAAAGGTCGGAAAGAA
AAAGTTAACCTTCTGACCTTAATAACCTTTCGATATCCACGATTGTGAAG
CAATTAGGAAACTTTCTAAAGAGCTGATGTTATGCCAACGTTAATCTCAT
CTCATTgttctataagaatatttggagtttttttagtAAAACTACGTGTC
ATTCGCGTGTGTGTCAAAAGGTTATGAGAAAGTTTCGGTAACCTTAAAAA
GGTGACATTTTGACCTTTATGGTCTCGACTTAAAACATGGCTCTTTGAAG
TATAATGGTTTTTAccataatgggcttttccagaagaaTTTTAATatggg
gagtggaggatatgaCATGTGAATTATGACCCCCCAACAGATCTTACTca
acccccggacaagcatcagttgacccccgcACATTCAAAGTCACCCCTAA
TCAGAGTATGTTTACCCataaaacaaggcaaatttttcagatttttaaat
acccctcggacaaaatatccaatatatcctcccccccccccccatgtaca
aaaattttctggaagagcccaaatCTTACCTCATGGCTCCTACCTTAATG
ACTTTCCATTTATATGTTACTGTGAGATTCCATGATTTTAGGGTCTCTCC
AAGTCACTTATTTAAGATTTCTGAAGAACTAACTGCCTACTAGCAGCAGA
AACTGAATTTTGGGCTTTCAACCTTTCATGCAGTTTCATGAAAGTGAAAC
CGGGTAAAGGATCACATCAAAGTCTTAGCGAGGATAAGTGcccaataaaa
ataaaaaccttgataaaaatttactggttctttaataaaacacccctgtg
tcacagacccgctggcgggaccccagccccactggataatttggcaaaaa
tttcgtttcTGGTAGGAAAATACccgggaatttcagccccatttggaatt
tgactttgatttcatccctatCCGAAAGTCAATGTTAAAAAACtggcact
ccaaaaccatccccactggattttttaaccttgaaacaataaaatttcta
tccccattgggatttcaattggaatttttatccctattgaggaaaaaagt
tccaccggggctgcgagacaggggtgtaataaaaaAAGCATCACATTAAA
TAAACcaaatttgtgaaattgaaattaaaaagtatcaataaagaaataga
aataataatGTTATTAATGGACTCATACCACTTAAATATCCCAATTAATT
ATCTTTAtttgactaattttaataagcTAAATCCCATCTGTCATTTCAAC
TTCCTATCCTGAATCATTACCCCTTGCTGTTTTTTTCCGTATCTCAAAAA
ATTGGGGTGATGACCGATCTTTATCATTTTAGCCGCCCGGGCATTTTAGT
AAATCTGCTACTCGTGCTTTTTGAGATTCgataaataaatttcatttttt
gaaaaatatgaaactTTTCAACTTCAAATATATACTTCAAACtggcataa
aagcttgtaaattgaGAGTAAGGCTGTGATGGCATTGAAGCTATTTTTAT
ACTCTTCCAAAAAAGCATATTTTTATACCCTTTAAAATAAAGTGGTCAAG
AGTTATAGCCTTAAGCCTAGACTCGGTATAATTGCTGATTTTCAATGCAT
ATACACGTCTTTCGGGTTTCAAAGAGTTAAGAGTTCTTGTTTTTGGAATT
ATTTTATCTACACCGTTTAAAGGTTGAGACAATCCAACAATTTATTAAAA
TCATATACAGTGTTTCAATTAAGAAACTAAAAAGATTCAAAAGCAAGTGG
AGTGTAcacatttctttataaaaacattctgaattgttaaagccttcgga
tgttttttttagttttttaagcctaaaaatgttcttaaaatgttcatatt
ttcggcattttgtgagtatttttctgcaatttcttaagaaaattgatgtt
ttagaGTTTACAAAGGCTTAAAATActctcttaatattttggctatcgaa
gtcttatgttctctcatatagtttgtcttatataaaaatatgtaCCAATT
ACgtctgaaatttgaaaaatcaaaattacaaTAACTTTCCCAGGGATGAT
GAGAGTTCAGTAAGTTTTGCAATTGAATTGGAATTACATTGGACGATTTT
CTTGGCTAACTTTTCCATTGGAAAAAGGGTCCTGCCGGGTTTGTGATAAC
GGCCTTGTATCCTAAGGTTATCCTCAGAAGCATCTCCTATTGACAAGCTT
TAATTTCTTCATCAACTAAAatcattgtcaattttttaatatttaggtTT
CAATGCTTTCCATCAGTTCTGAGATATCATAGTTAAAGCTTGACGGTATT
TGCAAACGAGTTATacttgaaagtgaaagtgattaAGAATAACTAACTCG
AATTGTTTTGATGACTTTCCAATTGGCTTGTTGACGACAACACAGCCACA
AAAAAGGTTACCTCCGAAGACACACAATATTAGAACCAAATTTAACCGTT
TGCAATGATCTGCGGAGGGCTATCCCTGACTGACTGGATACTGACGACAA
GGGTCGGTTTTTTATCTTTCCAAGTCTCTTTGGgttataaaaacaacaaa
aaagtctctctaatggGTTGTGATTTCCCTTTTAAGGATACGAAAACCAT
TAAGTGTCGAAAAACTTTCCAAGATTAGGAAAGTTTTCGaaaagggtcac
tttttcgtCAACCTGACATTCTCCAAACCTAGTACCCCGAGAGCAATGat
tataaaatgttttcaaaacacGGAGAATTTATTTCATTTAGCCTTAAAAT
CAAGGGTAAAGAAAAACACTATCACAGtatagaatatttttttatgatta
cATTTACAATTAATTAATATAACtgacaaattgaaatattcacaACCAAG
AAAATCAATTGCCAACCATTTTTTACAACTTATACATGCTTATACTTAAT
TTTTACAAGCTTTATCCAGCTCCACTGTGAAAAAATGACTTTATATTTTC
ATTCCAattaaaaattcaattaaaaaaattgtcatcCAAAACTATATTCC
CACTGGAAATTTTGACCTGAGAATAGTCAAACTTCTATACCCATTGGTAC
TCCGATAGAAATTTTTAACCCCACTGTGGAAAAAAGTTCGAGCGGGAATG
GGAAACAGGGGTGTTTAAttatattattgaaaaattaaatctaaTGGAGA
TTCTAccctaaaaaataatttgaatatttttcattcAACCTTGTCCCATT
TACCCCTGTGAAAATTTATAGCCGATGAATAGAATTTTTAAAGGGTTTTT
TGCTGCTTGCCAAAATTAGCTCCCTTGAGGTATTCTGCACTTTTCTACTT
CAAGACTTAAAAAATACCTTCACAAAGTTTGGAAAACCCCAAAATTACTC
TGTTctgtattcaaaaaaaaaaattgaggtcAAGAttgaatacacccctg
tgtcacagaccatTTGGTTTGGGATCCACTAGATTTTTTGAcctaagaac
aatagaatttctgtcCCCATTGGGATTCCGGTTAAAATTCTTATCCCCAA
TGTTGGAAGAAgatccaccggggctgtgagatgGGTCAATGGGttacacg
tttcttttataagaatacactttataagaatgtcaatgatgaaaatggcc
aaaaaattaagaataatactAAGAATATCAcgatcatggaattttgctac
tcaagctaggatcctaacctaagaatgatgtaagaatattttgggatgat
tttcccaaaaagttaagaatatccatgatgaaatagaTTTACAGCATTCT
TGTAAAAAATGCGTGTAGCTAATGCCTGAACAGGGGTGTTCTTTTTTGCT
TTGCTTTGTTCGTTTTATCGAAAGACTTCCTGGGAAATAAATCTATAGGT
GGTCTTTTCGACCAGTTGACGTATTTCTGATGGGATAATAGAGATTGAAA
ATTACTGTCCATCAGTTGTGTTTAAGCtggaattaaaaattttaaatgtt
tttcacATAGTAAAAACTAGTGAAAGCTGTATTCTTTATTATAAGAATCT
TTAGAATTAGTCGAGAATTAATCCCTCTGAGCATTTTTGTTAAAGCTTAT
CTAGTGTTATAACTGTTCTTAGGATTAAACGCATCTTCATCAACATTTTG
AACAGGCAGGCAGATAATAAATATCGGGAAATACTAGTAGGCTGTCAACC
CATTGACGTCATCGCTATTACATTATGCCTCAACACCAACCattcaaaat
aattcttattTGATCTAATCTTTCAACTTGTCATGATAAACTTTTCTTAA
AAGCATAGATATGTTTGGgagttataaaaaaagaaaattcaagactttat
ttcttaatttgcaagactttttaaactttttccaaTGCAATCCATTTGTG
AACATTTAATTTCTGGTAAAGCTTCTATGTAATAAGGTGGAAGTCGGTTT
TTAAAGAACGATTACATTATATTCTCCAAAGCTAATCTTTAAAAGAGTTT
CTGTTCTGTTCTTATCTATAAGATACGATGAATATGTTTTATCTGTCTAA
TCCCAATGTAATTTTAGAGGAAAAGCCACAGTGACGTGTATTTTCCCCTC
TCACTCAATATCAAATATCGACAACGCGTCGGAATTTTTCTAATTTGATT
GACAGCTCATTTTTGAATCAATAGAATAAATcaataataaaaacaacaac
aatataGGAGTGTGGTTTCGTTTTCAAAGCAATCAGAAAGTAACGAtcaa
tttttaatgatattctGTTTcgattcttatttttcttttcggGTCTCTGG
AATAATTTCCATATTATATGTACTTTACTGGTTCTCCTATgtagaaaaag
agaaaatttttctttacagAAATAACAAAAGCTACAAAGGAAATTGCTTA
GCTAAGCACTTTTCATTCATCACTAGATAATAGGATTATCAAAAAGTGCC
TCGCTAGCGTTTTTTATTGATTGTATTTTCCTCCTGGTCAAGTCTCTTAA
AGTGTGACCGTAAAACATTTAAAAGTGTTTGAGTTTCAAGCTTGCACCTA
TCTGCCCACGCTCCTCTGTCAAGTGAGGATAACTTTGAAAGAAGTATCTT
GTGAATTTGTGATTTGTTTTAATGATTGTTAACTTTTCACGTTTATGGTT
GATAATGGAGATAACATTTCTATTACAGGTGAAAATGATGAGAGTCTTGA
ACCTCCTGAATGTCTTAAAAACAAGAAACTATCCAACAAAGATCTCTTAA
CCGATGTCATCGAAGAGCTAGATGAATATAGCCGCCACCGTGTGCTGATC
AAACCACCCTTGTCACCTGATATTTCTGATGTCAGTGATTTATACTTGGA
AGATTTAATCAAAatccaagaaaaattgaaagagaaCTCTGATGAATCTG
NGTGATTTATACTTGGAAGATTTAATTAAAatccaagaaaaattgaaaga
gaaCTCTGACGAATCTTCTGCTGAACTTAATAAAGAagttaaaattgatt
ttgaagttGACTCTGAAACTGTTACAACCAGTAATAAAAATGAGACGACA
TCTTATCTGGATTGTATGGCTGAGCAGCAATACCCAACTTCTTCTAATGA
TGAAGAAATGCTTGCCAGAACCATTGCTGAGTTAGAATCAAAAGTATCTT
CAGAACCTATTTTTGTCAACTCTGTATCAACAATGTCAAATACAGAAGAA
TTGAAAGTTACAACAGGCCTTGTCTTGGCTAGTGGAAAATCAGTCACGAA
TGTGGAAACAACTGAGGGCCAAACTTTCACTGATCTACACTCAGTTAATC
TATCCCCCGAGGACGATATATGGAATTTCGTTAATAAAATCAATGCATCG
AATTCACCATTACCAGCAGATTCAACAGGAACCACATCGACCACTTTGAA
TGTTGGTAAAAAACGGACCTGGAGCCAAATGGTAGAAGAGGCAGCTGAGG
CTTGGAGTTCTGATAAAGCTTTGCCACAGATTTCCATCAAAGGTCCTGAA
GATTTTGAACCATTGCTTATGGAGGCAGATTCAACAACTAGCGAATCCGA
TTCTAATGTAAGTGAATCAACAAACCCTATGACAGGATTTGATGGTACTG
ATTCACCAAATTCCAACACAGATGGAGAGAGTAAACCAATCATAAAGAAG
GAgattcgaaaaaagaaaaacaacgaaGCTTCACGTGTTCACCGTGCCAA
GAAGAAACGAAAATATGAAGAGTTATTCGATAAAAAAGTCGAGTTAGAGA
AAAGAAATGCGGAGTTACAGATCCAAGCTGAGTCAATGCAAAAGGAAGCT
GAATTCTTAAGAGAGTTGTTATTGGTTAAAGTTGCCGCTTCATCGAAACC
TTGAAATGATTTTATTATGTTATGATAAAAGTTACCAAGAAAATCATACT
GAACTTTTCCTAGTTTCAAGGAAATCTGGAATCATTTTGAAGCTCCTGTA
AATAAGGAAATTAACTATGTGGTAGAGTTTAACACTGAAAGTTGTTGGAA
TTTTCAAACTGAAGATATAAATCTCATGAAGAAAATATTATGGCATAAAC
ATTATACATTAATGACAAGAATTTGAATCAGGACTTCGATTTCAAAATAC
AAAAGACATTttcaaattggaaaattttaatcaaaaaggACAAAATTTAT
ATTAAGtcccattttattgaattttagtGATGGGTCTACCAATTCGTCAA
ATTGTAaatatcatttattttttatcaatgttGTCTTTTTTGTTTATGTC
ACTTATAATTCGATACATCACATTATTTTGGCAGCATTTATCtcgaaaag
ttttgttttaatATCATTGAAGTTGTACTGAAGATGTTCCTTCGACTATT
TATTTACTTAGTCCCCAAACTGAAACATAtatatttccctaaattttatt
ttgataaattttgaagaaatgtcgtcatctttaatttttaaataagaaca
atttaatttCAATCCAAGGCAAGAAAATACTACTTTTTCGACATTTACc Coding sequence (CDS) from alignment at scaffold_102:270359..289007+ >TCONS_00045837 ID=TCONS_00045837|Name=TCONS_00045837|organism=Clytia hemisphaerica|type=CDS|length=963bp|location=Sequence derived from alignment at scaffold_102:270359..289007+ (Clytia hemisphaerica)
ATGAATCTGNGTGATTTATACTTGGAAGATTTAATTAAAatccaagaaaa
attgaaagagaaCTCTGACGAATCTTCTGCTGAACTTAATAAAGAagtta
aaattgattttgaagttGACTCTGAAACTGTTACAACCAGTAATAAAAAT
GAGACGACATCTTATCTGGATTGTATGGCTGAGCAGCAATACCCAACTTC
TTCTAATGATGAAGAAATGCTTGCCAGAACCATTGCTGAGTTAGAATCAA
AAGTATCTTCAGAACCTATTTTTGTCAACTCTGTATCAACAATGTCAAAT
ACAGAAGAATTGAAAGTTACAACAGGCCTTGTCTTGGCTAGTGGAAAATC
AGTCACGAATGTGGAAACAACTGAGGGCCAAACTTTCACTGATCTACACT
CAGTTAATCTATCCCCCGAGGACGATATATGGAATTTCGTTAATAAAATC
AATGCATCGAATTCACCATTACCAGCAGATTCAACAGGAACCACATCGAC
CACTTTGAATGTTGGTAAAAAACGGACCTGGAGCCAAATGGTAGAAGAGG
CAGCTGAGGCTTGGAGTTCTGATAAAGCTTTGCCACAGATTTCCATCAAA
GGTCCTGAAGATTTTGAACCATTGCTTATGGAGGCAGATTCAACAACTAG
CGAATCCGATTCTAATGTAAGTGAATCAACAAACCCTATGACAGGATTTG
ATGGTACTGATTCACCAAATTCCAACACAGATGGAGAGAGTAAACCAATC
ATAAAGAAGGAgattcgaaaaaagaaaaacaacgaaGCTTCACGTGTTCA
CCGTGCCAAGAAGAAACGAAAATATGAAGAGTTATTCGATAAAAAAGTCG
AGTTAGAGAAAAGAAATGCGGAGTTACAGATCCAAGCTGAGTCAATGCAA
AAGGAAGCTGAATTCTTAAGAGAGTTGTTATTGGTTAAAGTTGCCGCTTC
ATCGAAACCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045837-exon-scaffold_102-1491911889:270359..270417 | TCONS_00045837-exon-scaffold_102-1491911889:270359..270417 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1510915933:270359..270417 | TCONS_00045837-exon-scaffold_102-1510915933:270359..270417 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1575043694:270359..270417 | TCONS_00045837-exon-scaffold_102-1575043694:270359..270417 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1491911889:270580..270669 | TCONS_00045837-exon-scaffold_102-1491911889:270580..270669 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1510915933:270580..270669 | TCONS_00045837-exon-scaffold_102-1510915933:270580..270669 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1575043694:270580..270669 | TCONS_00045837-exon-scaffold_102-1575043694:270580..270669 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1491911889:278601..278915 | TCONS_00045837-exon-scaffold_102-1491911889:278601..278915 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1510915933:278601..278915 | TCONS_00045837-exon-scaffold_102-1510915933:278601..278915 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1575043694:278601..278915 | TCONS_00045837-exon-scaffold_102-1575043694:278601..278915 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1491911889:287187..289007 | TCONS_00045837-exon-scaffold_102-1491911889:287187..289007 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1510915933:287187..289007 | TCONS_00045837-exon-scaffold_102-1510915933:287187..289007 | Clytia hemisphaerica | exon |
| TCONS_00045837-exon-scaffold_102-1575043694:287187..289007 | TCONS_00045837-exon-scaffold_102-1575043694:287187..289007 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:270359..289007 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Blast
The following BLAST results are available for this feature:
|
