TCONS_00045831 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045831
Unique NameTCONS_00045831
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3066

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045831 ID=TCONS_00045831|Name=TCONS_00045831|organism=Clytia hemisphaerica|type=transcript|length=3066bp
GAAATTTATGACCAGCTGTTTATCAGATTCGGAAACAACGTGGATTCAAT
CGAGTAATATGGCTGTCACCACAGATCAACTTTATATCATTGCTTCAGTC
TTGGTTGTTCTAATTCTCATCCTAATcattgcatatctggtctggtATTT
TTACTACCAAAGACGCCATGGTAAAGGATTCGAGAAAATACCTTCTTGTG
AACGAGGTCAAGGTCACCCGGTTCTTAAAACTCCAACTATTGATATAAGT
ACTGTTAAATTTACTGTCCCGACTGGGCCGCCTGGTTCACGCCCCTATTC
ATGGGCGCCTGGTAATGATGATTTTGATGTTCATCGCGATGCTGGAACAG
CAGGATCGAATAAATCGGGCGCCAGTGGTAGTTTAGGGCGTGGATCATCG
GAACAGAATTTAGGGTTACTGAAGCCCGAACTTTATGTGACGAACGAGGA
ATCCGATTACGAATTAGAAGAAGACTTACCACCAGGGAATATCGGTCGAG
TCTGGTTCTCAATCGAATATGATGCATCATCAGAAAAACTAATAGTGAAT
GTTGACCGTTTACGGAATTTACCGGGGCGCCAACAACGTTCCAGTTTAGC
ATTATCCTCTACGTCTTCGTGTGATCCTTTCCTGCGGTTATATCTACTAC
CGGACGAAAAACGGTATCTTCAGTCCAAAATGAAACGTAAAACACGAAAT
CCAACATTCAAAGAAACTTTCATGTTTACAATGTCTTATTCGTTGTTAGT
TGAACGAACTTTAAGGATAACTGTATTTGACGTGGATCGATTTATGAGAC
AAACAACAATCGGACATGTTTTGTTTCCATTGGAAAACCTTGATATCACA
ACTCCAACGGATTTGTGGCGAGATGTTGAACGTTCTTCACAGATCTCAAG
TGGTGCCGGAAGGTTACAAATTGGATTGACCCACTTCCCAGATATCAATC
GTGTGGCAGTAAACATCATAAGAGGTCAGCAAATTGGTAACGAAGATATA
ACACTTCCAGATTCTTATGTCAAAGTGACGTATTCCGTATTAAGCAAAAC
TCATAAAGTCAAGAAAACTTCCACACAAAAAGCAACCAAAGAACCATTCT
ATAATCAaacatttgaattcaaaattgatCAACAGGGTATGGAAGTAGCT
TGTTTCAACTTTGAGATATTTCATTCAACATCAGGTATTGGAAAAAATGA
TAAAACGCTTGGATCATTCATAGTTGGTGGAGGTTTGTGCGCTAGAGGTA
AAGAACTTGAACATTGGACAAATATGCTTCAAAAACCACAAACTGTCGTT
AAAGAATGGCATAACTTaaaaaattaaggaaaaaatgattttttatggtc
CTCGATTTGACTACTAGATTTAGGGGATTTCAGAGGCGTATGAAATAcca
gaaaatttttccggccgatgACGGAATACCGGAACACCGAACGATACCAG
AAACTCTAAAGCCCCCTATACTAGAAATATAATGATGATTTTTTGTGCAC
TTTCTATGTTtaagtttcttaatttttcaaaatcttttaagatttttttg
tcacaataatttttactttttataaaaagggAAAAATGTTAAGCAATGTG
GCTGGGTTGTCATCTTAACCTTTTCAGTAACATAAATGGTGTAAAGTCGG
TTAAAGGTTTTTTAGATCCCAAaagcaaaatccaaaaaaatcattttgac
tCTTTGGGTGATTTCAAAGTGAAATCGTATCTAAATCGTTCAAAATAATT
CTCGGTGAAAGGCTCAGAAATTCAACAATATTTGTTTATCAAGGGAACTA
GATTTGGCGAACTGCAAAAAtccccaaaaaaattaaaattgatgactggg
taattttttaattttggtgaatttattGCCAAATTCCTCAAAAATTAGTG
CCTTTGACATAGCTTGACATAGCTTTTCACCGTGAAGTTTTCCAAACAGT
CAGAGGCAATAGAGGCTCATATCTGAAAGAATTTAACGTTTGAAAGTCCT
CTTCCcctgaaatcaaagatgaattttgaccaaattgattttttttgggg
gagggggtattttaaaatttgaatttaaaacattAGTGGCACATGTGAAA
GGATGAAAACTTTATGATTTAAACCTGCTTTGAAATGGTTAGGATGACAC
AACATCACTTCAAAATGTAAATACGAGATACTATAAATTTAATTTGAGTT
TTAATTATCATATTGTATTACAGTTAGAAAGTTTATATCTTGCCGACGTA
GAAATTTGGTATGTGTTGATACGTTAGAACTAAAACCaaagctttttaaa
atcatTGGTATAAATCACACCAAACATAAGTGGAAGTCAAAATTTATTGG
TTCTAAGCGACATTAGCGTGTAGTTCGAAAGAATAGTAATTCAGTGGATT
TAAACAAGAACTCTAATTAGGTCCCGAATAAACATCTCCCCCCCCCCACT
TATTAGTTTTTGAAAATATTTTCAGCTATCACAAGCTGAATTGCTCTAAA
TAGCTTTAGCTTATAATTACCTTATTTTGGGCTTTTTTTAGGTACAATTT
CCAACCCCCCGGtttattagattttgaaaataaattcggATCCCACCCCC
TGTTTTATTCGGACCCACCCCCTCCTACTAGTTTGGACCTTAGAGTTAAC
GACTTTGTTTAAATGTTCACATAACTTTAATAGGATTCTATAGACGttaa
atcaatgtttttttgtcGTTATGAGTCGGCTGGGATGGAATTTGGTTATC
AAAGAgtcccagctggtacacaacgttgtttcaacgtttattctAAAGTC
cgcaacgtccatataacgtcagATTAGCGTTGTCTATTCTGCAGGAACTG
AGCATTGATTAAATGATATACTTTAGTTGTTAGAGATAATTTANAATCCT
ATTCTGCAGGAACTGAGCATTGATTAAATGATACACTTTAGTTGTGAGAG
ATAATTTATTAAATTTATGTATGTatgaatttgaattatgaaACTTTAGA
TGTGTTTATATTTAAAATCAATTAATTCTGTCATTTTCTGTCGAGAAAGA
ATTACCTGGAAGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_102:135261..151088+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045831 ID=TCONS_00045831|Name=TCONS_00045831|organism=Clytia hemisphaerica|type=transcript|length=15828bp|location=Sequence derived from alignment at scaffold_102:135261..151088+ (Clytia hemisphaerica)
GAAATTTATGACCAGCTGTTTATCAGGTTACTTTACGCCAATTCTCACTG
GCGTTTCAGCTCGTTTGTTAAGGGGTTATTATTATAACTACACGCTTTTA
TGAGAAAACccaaactttttgaagccttcggatgttctaaactttttgag
ttccaagcctaaaaatattcttaacatgttctttttaatttcaccatttt
gtgagtatttctgtccattttcttaagaaattgggtgttttagagttcgc
aaagccttaaaatgttctaaacttgtttttttaacattttggtcatcgaa
gccttatgtttttatatagtttgttcttgtaaaaaacgtgtaccattCTT
TGGCTGTGTCCAGACCAGAAAGTTTaaagtacagggtgtccctaattaaa
gtatcgagtcgaaacacaactatgagtagaaagttttatgtgcgtgttca
caaaattgtattttaagctctccctcttttttctttgtcgttacgattaa
tttataggttgtaactaccttttgtacagggtgtccctaattaaagtatc
gagtttgaacatgcgattgggtagaaaagtttgtgtgtgttatcgctaaa
atataagaacgttctccatcacacaggcttattacaaaaggtagttacaa
cgtataaattaatcgtaatgacaaagaaaaatacaattttgtgaacacgc
acataaaactttctactcatagttgtgtttcgactcgatactttaattag
ggacaccttGTAGTACTAAGTTGATATGAGATTTCAATTCTGATTACTCA
TCTTCTTTTCGTTATTCTAAAAAGTAAAGAGCATTGCATTTTACAATAgt
agaataaaaaaagaatgtagtCCTAATTGCCTACTTAAACCTACATTTCA
TCCTGAACGCGACCGTTGTTCTCAGGACAAGGCATGCTTTTTTATGGTTT
CGGTTTATTAATTCTGTGTGTGTTAATGGGGAAGCAATTAATTCATTCAT
TAGCGTTTGTGGTCTCCTAAAAAGACGCAAGAAGTCTTTTATAAGAAGCA
GCAGTTGGTTCTGCTGAGACTCATATTTGTTgaactgtttttattttctg
gctctTTAAGCCTCAAATTGTGGTCttaaaattgaagaattttaGGCTCT
TGTCCGATTTTTACCACTTCCTTAACCTTTCAAATGCCTCAAATACAACA
ATCCTAGGCTGAGTGTTGTTGTTAAATTTtccaagatttttaaatttttc
acgaTTTCGAGTCTGcgactgttcttataaaattttgtCCTCATAAAAAA
GGACTGCattgataataattttttgTTCCATCACTTTTACATAGAAAAGT
CTAACAGAAACTGGAATGAAACGATGATGGCAATGCTTGAGAATTTGTTT
TAAGTATGGTTTGTTAGCTTTTTATCTGGTGAGCCTTTCAAGAACTTTTA
GAATGTTACCGAGTATAGCCCGGAAACCTAGCGATAATTTTTATGATGGC
GATGGCTTCAGTAACAGTATAGTAGAAAAGAGTCAGAGCCAGATTCTTTG
GTTAGTTAGTGAGCTGTAATCATAGATCTGTAAATCCGCGGCCTTTATCT
AAAAGTGAAGCATGTTTtgataggatttcctaccaaagaaatcacgtgac
aacaagcactggtttgagagatgcgaaatagcgtttgccgcctacttttt
ttatctcgcgctccgaaaacaattaaaatgctacatcctatccatcggca
cgaaatttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNgcacgaaatttaaaaagtcaaatttttgcttcacttt
ttttttgctggagaaagcttaaagttgcctatctagcccttcgggcttta
cagatctgtggctGTAATGACTTCATACGATAGCCTGATAGTAGATCAAC
TTCTTAGCGCTTAATCTATTATCTATTTgacattttaaaactttataaCC
TAATGTTTGTATGTATAAATTTGAGCGTGTGAATTTAAGCTCGGTGCGCA
GACGCTTAGTTATTGGTTATACGAAACAAATTAACAACGCGTGGAATTTG
ATCTACTATCATGCTATCGTGTGGAGTCATTACGTGATATTTTCGCCGGT
AATTATAATTGGAGattattagttacacggtcttctcAAGGCGGGAcacg
ggatatacagggtcattaaaaaccgtattggtggcgaAGCTTGCCGAGta
tatcccacctccacgtgatgtcttttgaccaatgaaatcaCTAGGATGTT
ACTGATGCGGGATAAAAAAATGGTATCGTAAATAGCGAAAGGTCTATGGG
TTTAGTCCTTTCTTCTGCTACGCTAGATCTgttaataccgagtttatgta
tcagaggatatcgagggcgacggtaagtgaaatgatacaaaacaaagtcg
atggttgatgtacggctctatatcgcctttgctcacctaaacagacgacg
gtattttggtgtttttaccgttgtcgagcaaagtggacggtgattttgga
gacatgtcaactttgcttttataccgtccccctcgatttatctcgaatac
ataaactttcatccgacacgctaaagctctgaaggtcaggaaaattttca
acatctggaaggtttacattacggaattttgcgagaccgaattttgcagc
gggaggtccgGTAACCCAgtcctcgttttcggggattggcaggtccaacc
gaaatatttataggtttacgcgcaagggctgttgaacccgactgggggtg
cggcacatcaaaggccgactatcattcctctccgatgggaaattggcccg
ctcctttagagctttagcgtggacggccgccaatccgccatcggaatatc
agataacataATCTGTTAATCTGGGCANccgtccccctcgatttatctcg
aatacataaactcactaatCTGTTAATCTGGGTGGTACCAAAAAAAACAG
CATGATCAGGAAACAGGAAGAAGTTTGAGATGGAGTGAGACAATCGGATA
ACAAACAAGTACTAAGCGAAAGGGGAGGAAATAGGCGGAAAACGGAGAGA
GGGGGAGAAGGAGGAGAAGGAGTAGGGGTACGGGATGGAGGTGTAAAAGT
TTCAAGATGGCATTATTCAAactaaactttttttataagaaccagaaaaa
ttttgataaggttcgattgttcttgttttttggcactttcagtCTCAAAT
TATTTGTATCCTGTTCTTCGGGTGAAATTGAAGTATTTTAGgatttatac
ccaatttttacttcTTTCTCTTACTTTGAGCAATTCCAGGTTCAGCAATG
TTCttagattgttcttattttttggcgattttgagcctcattgttatcat
agaattgttcttataaaagataaaGGTGTAGCTACCTTAAAAGCTTAATA
AATCATTTCCtctaagttgaaaaatttcttatCTCTTGAAAATTTAGGCA
CGAATTTAATTATAAACCATCGTTTGATGGATGGCTGGAAGGCGTATCTC
GCCTAAATCTCTTCTTGTTTAAATTCTTCCTTTTAAATAACCCTTATTAT
ATCAGTATAAAAGCTTCTATACACTGTACTATGCTACACTTTAAGCATTT
AAAGTATTCTCTCTTGGGaagaagaaaggaaaaaagaaaaatggcagATG
TGATAGTTCGTACGCATTCTTATACTTGCTGGATATAAGAACATTAGAAC
GCTTTACAGACTCTAGAACTAATGAGTCTACTACGAAGGACGAAAAACGT
GTCTGCCGATAAATAAATAGTCTCTTCTAGAACATGCATCTATTAGGAAA
TTAGACCGAAATACTCACGAAACCCCTAAAATGATAGCAGCTTCGGTACA
TCCTAAAGCCTATaaaatcttgatgttcttataaaagaaagcatTTAATG
CTACTGTTATTTCCCCCTTTTCGAAGCTAAAATGAAGTTATACTTTTTGT
AATACTCtgtttattatatattataaatgtatttttttttatcaacctAC
GAAAGTATATGTGTGTACCTTTTTAAGATGTTATTTATCGCGATGAATTT
TGATAGGGGGTAGACTGAAAGAACTtcttgaagaagaagaaaaaaccacA
TTTTTTCTTCGCTAGCTACAGTTTTTAAAGTTATGTGTTATTTTGAGggg
atcattatttttttacaagatgTTTTTGAAGGGAACTAAAGTTACAGGAT
AGGGTAGGGCGATAGGCgttaaaagaatattttttgtttatttttttggt
gGTTTGGCATTgacgagcccccccccccccccNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcccccccccccccgagcggttttcgtgatgac
gtgatagggacttttttgcagcgtgattacgtaatttggaaatttttgct
tttcttcgtgattgcgtgtgagaggtcaaaacgtgatcgtgattttaaaa
agatttttaaaccgTGATATCGTGATCCGAATTACCGCTGGGGGCCTCAT
TGACATGATTTGGTATATTGACAATAAGAAGTAATTAAAAATAATGGTTA
GGATTATTGATCCAGTTATAGTTTTGAACCCCTGTCTCAGTTCCCCTATG
AGAAGTTTTTTAGCTATTGGTGGAAGTGACCAATTAGTTAGTATCGTGTG
GTTTCGAAGCATAGGATTTAGcaggaattaaaaaaaactacagGTAGTGG
CTATCCTAGCCCGGAGATTGAATGGATAAATAGATCGAGTGACGATGTGT
TGCGCGGTGACTGAAAATCATTGACCAATGACCGATTTACTTCGAAACGG
GATacgaaattttgtaaaaaagtgctgacgtcagcaaaatttcaaactta
ttttttgggaaaatgatccttttaatgaatcaacggatcctgcactaatg
tacttcccagttttctaGTTGATTTCGGTGATTCATTACCtataagtaat
acgcacttgatttcacacagatccttttaatgatgttCAACTTTAGTACA
ACAAGACAGGGTTAGTGATCAAAGACGCCTTTTGGGTGTTCTTCCCATCT
TTCAGTGGTCTTTCAGAAAACTTGGTCACTAGGGAGGGGGGGGTTTGGCT
ACTGTCTGTGAATTGGATAGTGATTTTAAAACTTCTCAAAACATCCTTCA
TTTTTATCCAGAATTTTCCAAAAGAGGCAACAGAGACCAGTGATTGATCt
tgtatttcgatatttttcataagcttctgctcatcctcaaGCGAAAAAGT
TTCTCATATAGGAAATATATCTATATtttgcgattcagactatattTCTC
ATCACCACCCTACCGGACACAGAGATGGGAAAGGATAAATTGTCCGTACC
CCCTGGATCTCCCGGATATACCGTTTTTAGATTCTTTTCTCACCACTTTA
AATATTTCTAACTAGCTGACTTACTTAAATTTTAGAAgagtgaaaaatga
aataaagaagAGAATAAGATCGTAtgataaagcaaaaaaaagtgaaaatt
taagGAGTCCAAataaagaaaaggaagaaagaaGATATGATAATGAAAAA
ATGATACCTGAATATCAGGTaagtaaaaatgttttgttttcaaattcttC
AGTTCCTTTTTCGTTTCCTTCTTCCCTCGTTTTTCTcctataagaacaat
ttttacaaaagttttatGAGCCTCGAATTATCGTTAAGACCTGGAAAGAA
ATGCATTTATGCACAATATGCAAATGATAGAACTTTTATTTCCGCGGGAA
GATTGATTCCCgaggggggggcactgggtttgcggactgacggtatgtgc
gggccaaaaattggcttttaaaattgcacccttacagNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgacc
cttacagtgcattttaaacatattggaaaaggtacccttaggacccgcac
atacccgtcggtccttttgcccagctgccccccccccggggattgATTCT
AATTAATTTTACGCGGTTTGGATCAGAAATCCGACGAATCTCTAGTCAAA
AGAATCATTTTCATACTACTACCTAGCTCGCTTTTTATAATACTGAAAGC
GATCGATTGATTATCACACATACATCGGTAAATTCAAAAAGTAGCCTGGG
CTCGAGTTTACTCGGGGTGAATTGCGCGCTAAATCTGCGGGTATATTTAT
GGAATGACGCCGAATTCTATCCTTACAAACTCAAGTCTAATCTTCTATTA
GGGAACTTTATACGTGAGGTTTGACAGGTATATAAAGAAAAGTGACCTTA
GGTGTACGGTAGAGAGAATTCCGCTACAGTGCGTGAGGTCTGGGTCATAC
TCCATGCTCAGTATTAAATGGTACAACTTAATACTCAGCAATTAAGAAAA
GGATCAAGGTTAAGTGGAGCGATCAGGGAGAATaagtggcaccctcccct
accttcgggtggaTAGCCAGCAAATTTTACAGTAAAAAAATCCTCTAAAA
TTGGCATTTTTAGTTTCTGTTGTCATTCTTAGAGTCTgctgccaaattcc
atgatggtgacgttcttaccatattcttaatttgttggccgatttcatta
tgaatattcttataaagtaaactcCTATAAAAAACGCTTACCCGATTATT
ACTAATTTGACACTTCGTGTGCTTAAAATTCAGTCATTAGCCTGACAGCT
TCGCAATTATTTTCTTAATGTTTTTGaccctcattgttcttataaagttg
aaaaaaaagtggattttgGATCTTTTAAACCTATATTCATCTTTTCCTAT
TACAcgtttttgtataagaacataaggcttcgatggccaaaatattaaga
acaagctcagaacattttaaggctttgtgtgGACACACACCCGtattctt
aggaaaatgggtaaaaatggtcataagaacatttttaggcttgaaaccca
aaatgttaagaacatctcaaggcttcaagaattttggatgttcttataaa
agaaacgtaTATTCACCTTTATCCTCCTTTTCGAACCGGATCATTCTGAA
ATAGAGGAAGTCCAAAAAACATCTGACGCAAAACTTGTTCTTGGTCACAA
TAGATAAAAATCTTAATTGCATTTTGCACGGAAAGGTTGAGAATGCAAAT
TTCGTTTTTACCCCCTTCCTTTTTAAACGGAaccaagatttttcaaaatg
taatatgttaaaaaagtttattttgtaCTTTAAAAGCCTTGTCCGATCTT
ATTGTATTCTGttggaataaaaaaattctaaattagTTAAAATGGATTTT
AAGTAGCAAATCTCTATTGCAGGATCTTAtatctaaagtctgtccagata
taattggcagtggaaacaagaatgcctgtaacttttgatagtcaaatata
attatggaatttttatttgcttgtttcaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcaaaagcgctatatttgaatgtatttttggttgaaaaattcgcgat
ttttagcggttaaatttgcgattgtaaaaattgagctttttttttactta
tgctataacgttcatttttacaccagtggtagttcaaccttaggttaaga
attttcttaaatttcaaggcgaacagaaaagtccttcggaagatatggga
cccgaaataccccttggtagcacttttctgtgaaatatcatatctccaac
ttattactaaaaacgttTATTTGGAACNggttatgttatcttttttgaac
agtgcaattaaaagttggaaagtgttggtgcattggtattattggtatca
ttgattatttcgaaactaagtgaaatcacagtataattgtttttattgaa
aggataagcatgaacttacaTTGCCTTTGCTATTTTTAAGgtattaaaga
actttgctaattcccaaaacactaagcacagtttggctatgaggtcatta
aagagatcgtaaaatgtgttatatGATCGAACAACTGTTTTATCAtgtca
ctacccccgttttagtaataagttggagatttgatatttcacagaaacgt
gctaccaaggggtatttcgggtcccatatctcccgaaggacttttttgta
cgccttgaaatttaacaaacttctaaacctaaggttgaactaccactggt
gtaaaaatgaacgttatagcataggtagaaaaaaagctcaatttttgcaa
tcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTattctctgaaacaagcaaaa
aaaatttccataattatatttgactatcaaaagttacaggcattcttgtt
tccactgccaattatatctggacagactttaaataAGTTTGAGCTTAATG
gcccagtgatattcatattgggAGTTTATCGTGGCTTAGATCACaagagc
caaacgtaaatctcgtgatccaagccacgataaacctccaatataaataa
atctattATACTCTCATACTTTATTCATACGCGTTTACCCCGTTTTTGTT
ataaaagaatttcaaagtATTCAAAAATAACTGCCTGAAGGTAGGGGAGA
TAGCTTTTTTCTACTCCCTCCCGGATGGAGAGGGGGGGTGGTAATAAGTG
GTTGAAGAATGTCAGGAATGTGCGGACCGGACCCTCAAAAACCGGACCCT
CAAAAACCGGACCCTCAAAAACCGGACCCTCAAAAACCGGACCCTTAGTA
GAGAGTAATTAAGTGCCATATTCATGATaggcaccattgcaatgtcttcc
acgaacccaacagctgattggttgaaagtgacgtattgattgatattacg
tcactttcaaccaatcagctgttgggtccgcggaagacattgcaaaggtg
catatcatgaatagaagtCTTTGATATGACCCATAACCTTGAACAACGAA
GCCGAGGAGATTTTAATAGCTAAATACGTTCACGTTTATTCTTTAATTTC
AGATTCGGAAACAACGTGGATTCAATCGAGTAATATGGCTGTCACCACAG
GTAGAAAAAACTTGTTGGATCAGGCTTTCCATATTAACGAAATTGTGTCC
AGTTTTAGAGTTATCTCATCGGCTATTTTCATTTTGGTTTGAAAGAATCG
aacgtaaaaaaagaaaacagcaTGGTGAAATAGGGTAGACTAGTCGACAA
CTGGACGGGTTTTACTGGGAATCTGTAGTCCACTACCTTAAGTTTATTAA
TTTTGGTGGTATCCAATTTGGTAGacaaaaacaaagttttaactTCCGGA
TTTTCTTACGGCTTAAGCCATAGCCTTTAGAGTGCATGCATACCAGCGcg
gagtatcagaatctgctcaGTAAGAGTGTCAGTTGACAATGCCTTAAAAT
ATATTACCTAAACTTGTTACGTCGCGAACGATAGTAATAAGCTCTTGGTA
GCAACAAttgataaacaaaaatttcaggtCACTGTTTTAGCCTTTGCAAA
TATCGACTCAACATTATCCACTTTCGTTTTTAGATCAACTTTATATCATT
GCTTCAGTCTTGGTTGTTCTAATTCTCATCCTAATcattgcatatctggt
ctggtATTTTTACTACCAAAGACGCCATGGTAAAGGATTCGAGAAAATAC
CTTCTTGTGAACGAGGTCAAGGTCACCCGGTTCTTAAAACTCCAACTATT
GATATAAGTACTGTTAAATTTACTGTCCCGACTGGGCCGCCTGGTTCACG
CCCCTATTCATGGGCGCCTGGTAATGATGATTTTGATGTTCATCGCGATG
CTGGAACAGCAGGATCGAATAAATCGGGCGCCAGTGGTAGTTTAGGGCGT
GGATCATCGGAACAGAATTTAGGGTTACTGAAGCCCGAACTTTATGTGAC
GAACGAGGAATCCGATTACGAATTAGAAGAAGACTTACCACCAGGGAATA
TCGGTCGAGTCTGGTTCTCAATCGAATATGATGCATCATCAGAAAAACTA
ATAGTGAATGTTGACCGTTTACGGAATTTACCGGGGCGCCAACAACGTTC
CAGTTTAGCATTATCCTCTACGTCTTCGTGTGATCCTTTCCTGCGGTTAT
ATCTACTACCGGACGAAAAACGGTATCTTCAGTCCAAAATGAAACGTAAA
ACACGAAATCCAACATTCAAAGAAACTTTCATGTTTACAATGTCTTATTC
GTTGTTAGTTGAACGAACTTTAAGGATAACTGTATTTGACGTGGATCGAT
TTATGAGACAAACAACAATCGGACATGTTTTGTTTCCATTGGAAAACCTT
GATATCACAACTCCAACGGATTTGTGGCGAGATGTTGAACGTTCTTCACA
GGTAtatagtttttgtttttgtttttgtttttgctttttttttctctaaa
acgATAGTAAAGGTACATatactttcgcgggcagaaactttcaccATTTT
CGCGATCTTTGCCCATTTTCGGGAAAGTTTCTGCCAAGTAAGAAATTCCA
CGAGGAATTCGCCAAAGTTTTTTCCGGGAAAAGTAcacttttttgctatt
ttatactcagttttattacttttttgcctgcaaaatgaaataaacattCG
CGCTGAATTcgttccaaaattaaaattcgcgaaagtttctgcccgcgaaa
gtttctgcttttAAAGTATAGAGTGTCCGGAAAAAAGCGGAATGGAACGT
ATACAAATAAAAAACTTCACGCTTCAACCAGTTTTTACGGTCTTATTACT
CCACTGTACAATGTTTTTAATCTTCACAGGTCTACAGTTTTTTTTCTGGT
TtggtttttcaatatttctctAAAAAGATAACATACAGAGTGTCCCATAA
AGAGTTTCCCGTAAAAAAAGATATGAAAGGTATTTTTTGGGGAAATAAAT
TTAGACATCTAACTATAAAACTAACAAGTCACATATGTTATGAcaatcaa
ctctctctaattcgaacgcctgttacacgcttttttttataagaatacac
tttataagaatgttCATGATAAAAATGGCCAAAAAATTAAGAATatgcta
agaatatcaccatcatggaattttgagacgtatgtactaaatgttaaatc
tagtctgaattaggatcctaacctaagaatgctgtaaaaatattttagga
taattttcccaaaaaaagttaaggaTATCcgtgatgaaatggatttacac
cattcttatagaaaaaaagcgtgtattcaaaTCTTCCCATAATTTTTGGT
GtctagtttttctttttttctctaaaacgATAATAAGAAAAACATACAGA
GTGCCCCATGAAAAATTCTCCGTAACAAAAGATGTTAAAGGTATTTTTAT
GGGGAAAAGGTTCAGAAAGTTTAGAACTATCAAGAACAAACGActggttc
tcataaaaaactATCATTTTACACAGACTCAAAACCTCGTCCCCAGTGGG
aagaataccctacaatttcatccTCACTGgggaattgactttgatttcat
ccccattcaaaattcaatgtaaaaattgcactccaaaaccatccccacca
GATTTTTTGACTTAGAaagaatagaaattttatccccattgggttTCAAT
AGCAAATTTTATCCCAACTGTGGGAagaagtttcaccggggctctgtgag
acaggggtgccaTTTTATTCATAATGGTGACAACTCATTGGATAATTGAT
TTCTTTAGATCTCAAGTGGTGCCGGAAGGTTACAAATTGGATTGACCCAC
TTCCCAGATATCAATCGTGTGGCAGTAAACATCATAAGAGGTCAGCAAAT
TGGTAACGAAGATATAACACTTCCAGGTATGTTTCCACTATCCGgaatat
atttatatttatttatatttcataaagctgaaaattactagtctgaatca
cagacctctatagatatacttcctatatgagaaacttttttcgctagagg
atgagcggatgagcagaagcctaagaAATTACTGAAACACTGaattattg
aaaaaacttttgcttttCGCCGTGAATTCAGCCCAAAATTCATGTCTTTC
CCATCGTTAGATTTAATCCGTTATTTTAAGGTTCAAATCTCTAGACTCAA
tagtaggggccactatgtcgcgaaaaagcttcccgtgtgcagcagcttgt
gcaaagggattttatgattaaatattgttccttgaatgtagagaagatca
aaatttgagtggtggggccgggtgtgaccacccgttgccatggaaactga
cgtcattggttactatggcaaccaaaacaaaaagtcgtcaaaattgaaaa
ttatttgttccattcgaaagagcatgaaaaactgataaagaaaaaggtca
caatctatatctgaaaatgaatatatcaggagatattaaggaaataaggc
aaaatgacgtcataaaacgatgacgtcatcgaaaaataaaaatttgccaa
aattcaaaaagttttggttttttggaaagaataccttccagtgaacataa
aatattatgacgaaaaagtctgaaaatcctttttaagaagtcttttagcc
aaaatttatatttttaaattttgcctgtaatgtGCTGGGCTGCACGTACC
CCAAGGCTACAACCTTTGacaggcaaaaattgaaaatgtcaattttggcc
aaaagacatttttttaacgggtctgtgagaagggggtgttaatGAGAACC
AACTGTATTTTGTATATTTCAGATTCTTATGTCAAAGTGACGTATTCCGT
ATTAAGCAAAACTCATAAAGTCAAGAAAACTTCCACACAAAAAGCAACCA
AAGAACCATTCTATAATCAaacatttgaattcaaaattgatCAACAGGGT
ATGGAAGTAGCTTGTTTCAACTTTGAGATATTTCATTCAACATCAGGTAT
TGGAAAAAATGATAAAACGCTTGGATCATTCATAGTTGGTGGAGGTTTGT
GCGCTAGAGGTAAAGAACTTGAACATTGGACAAATATGCTTCAAAAACCA
CAAACTGTCGTTAAAGAATGGCATAACTTaaaaaattaaggaaaaaatga
ttttttatggtcCTCGATTTGACTACTAGATTTAGGGGATTTCAGAGGCG
TATGAAATAccagaaaatttttccggccgatgACGGAATACCGGAACACC
GAACGATACCAGAAACTCTAAAGCCCCCTATACTAGAAATATAATGATGA
TTTTTTGTGCACTTTCTATGTTtaagtttcttaatttttcaaaatctttt
aagatttttttgtcacaataatttttactttttataaaaagggAAAAATG
TTAAGCAATGTGGCTGGGTTGTCATCTTAACCTTTTCAGTAACATAAATG
GTGTAAAGTCGGTTAAAGGTTTTTTAGATCCCAAaagcaaaatccaaaaa
aatcattttgactCTTTGGGTGATTTCAAAGTGAAATCGTATCTAAATCG
TTCAAAATAATTCTCGGTGAAAGGCTCAGAAATTCAACAATATTTGTTTA
TCAAGGGAACTAGATTTGGCGAACTGCAAAAAtccccaaaaaaattaaaa
ttgatgactgggtaattttttaattttggtgaatttattGCCAAATTCCT
CAAAAATTAGTGCCTTTGACATAGCTTGACATAGCTTTTCACCGTGAAGT
TTTCCAAACAGTCAGAGGCAATAGAGGCTCATATCTGAAAGAATTTAACG
TTTGAAAGTCCTCTTCCcctgaaatcaaagatgaattttgaccaaattga
ttttttttgggggagggggtattttaaaatttgaatttaaaacattAGTG
GCACATGTGAAAGGATGAAAACTTTATGATTTAAACCTGCTTTGAAATGG
TTAGGATGACACAACATCACTTCAAAATGTAAATACGAGATACTATAAAT
TTAATTTGAGTTTTAATTATCATATTGTATTACAGTTAGAAAGTTTATAT
CTTGCCGACGTAGAAATTTGGTATGTGTTGATACGTTAGAACTAAAACCa
aagctttttaaaatcatTGGTATAAATCACACCAAACATAAGTGGAAGTC
AAAATTTATTGGTTCTAAGCGACATTAGCGTGTAGTTCGAAAGAATAGTA
ATTCAGTGGATTTAAACAAGAACTCTAATTAGGTCCCGAATAAACATCTC
CCCCCCCCCACTTATTAGTTTTTGAAAATATTTTCAGCTATCACAAGCTG
AATTGCTCTAAATAGCTTTAGCTTATAATTACCTTATTTTGGGCTTTTTT
TAGGTACAATTTCCAACCCCCCGGtttattagattttgaaaataaattcg
gATCCCACCCCCTGTTTTATTCGGACCCACCCCCTCCTACTAGTTTGGAC
CTTAGAGTTAACGACTTTGTTTAAATGTTCACATAACTTTAATAGGATTC
TATAGACGttaaatcaatgtttttttgtcGTTATGAGTCGGCTGGGATGG
AATTTGGTTATCAAAGAgtcccagctggtacacaacgttgtttcaacgtt
tattctAAAGTCcgcaacgtccatataacgtcagATTAGCGTTGTCTATT
CTGCAGGAACTGAGCATTGATTAAATGATATACTTTAGTTGTTAGAGATA
ATTTANAATCCTATTCTGCAGGAACTGAGCATTGATTAAATGATACACTT
TAGTTGTGAGAGATAATTTATTAAATTTATGTATGTatgaatttgaatta
tgaaACTTTAGATGTGTTTATATTTAAAATCAATTAATTCTGTCATTTTC
TGTCGAGAAAGAATTACCTGGAAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029295XLOC_029295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045831-exon-scaffold_102-1491911889:135261..135286TCONS_00045831-exon-scaffold_102-1491911889:135261..135286Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1510915933:135261..135286TCONS_00045831-exon-scaffold_102-1510915933:135261..135286Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1575043694:135261..135286TCONS_00045831-exon-scaffold_102-1575043694:135261..135286Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1491911889:145313..145360TCONS_00045831-exon-scaffold_102-1491911889:145313..145360Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1510915933:145313..145360TCONS_00045831-exon-scaffold_102-1510915933:145313..145360Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1575043694:145313..145360TCONS_00045831-exon-scaffold_102-1575043694:145313..145360Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1491911889:145844..146661TCONS_00045831-exon-scaffold_102-1491911889:145844..146661Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1510915933:145844..146661TCONS_00045831-exon-scaffold_102-1510915933:145844..146661Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1575043694:145844..146661TCONS_00045831-exon-scaffold_102-1575043694:145844..146661Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1491911889:148019..148136TCONS_00045831-exon-scaffold_102-1491911889:148019..148136Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1510915933:148019..148136TCONS_00045831-exon-scaffold_102-1510915933:148019..148136Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1575043694:148019..148136TCONS_00045831-exon-scaffold_102-1575043694:148019..148136Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1491911889:149033..151088TCONS_00045831-exon-scaffold_102-1491911889:149033..151088Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1510915933:149033..151088TCONS_00045831-exon-scaffold_102-1510915933:149033..151088Clytia hemisphaericaexon
TCONS_00045831-exon-scaffold_102-1575043694:149033..151088TCONS_00045831-exon-scaffold_102-1575043694:149033..151088Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:135261..151088 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.145756	0.0357294	0.22258	0.0466523	0.084255	0	0	0	0	0	0	8.72758e-09	0	0.136328	0	0	0.44372	0	4.59827e-10	0.0086678	0.0545232	0.000316185	0.123001	0	0	1.0576e-06	0.433083	0.53856	2.56627e-05
Blast
[Close]
BLAST of TCONS_00045831 vs. Swiss-Prot (Human)
Match: SYT15 (Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 7.555e-56
Identity = 113/307 (36.81%), Postives = 173/307 (56.35%), Query Frame = 2 
Query:  410 LGLLKPELYVTNEESDYELEEDLPPGNIGRVWFSIEYDASSEKLIVNVDRLRNLPGRQQRXXXXXXXXXXCDPFLRLYLLPDEKRYLQSKMKRKTRNPTFKETFMFTMSYSLLVERTLRITVFDVDRFMRQTTIGHVLFPLENLDITTPTD--LWRDVERSS-QISSGAGRLQIGLTHFPDINRVAVNIIRGQQIG-NEDITLPDSYVKVTYSVLSKTHKVKKTSTQKATKEPFYNQTFEFKIDQQGMEVACFNFEIFHSTSGIGKNDKTLGSFIVGGGLCARGKELEHWTNMLQKPQTVVKEWHNL 1318
            +G + PELY   E+     E D P G +GR+WFS+EY+  +E+L+V + + ++L    +          +C P ++LYLLPDE+R+LQSK KRKT NP F E F+F +S   + +R L+ +V+ VDR  +   +G VLFPL+N  +       +WRD+E  S +  S  G LQ  L++   ++R+ V ++R + +   ED  +   +VKV+    +K  K KKTS    +  P YN+TF FK D   ++ A  +  +  +    G   + LG  +VG  +  RG+ELEHW  ML KP+ +VK WH L
Sbjct:  124 VGAINPELYKFPEDKS---ETDFPDGCLGRLWFSVEYEQEAERLLVGLIKAQHLQAPSE----------TCSPLVKLYLLPDERRFLQSKTKRKTSNPQFDEHFIFQVSSKTITQRVLKFSVYHVDRQRKHQLLGQVLFPLKNETLVGDCRRVIWRDLEAESLEPPSEFGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGIVSVFVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNME--GDKSQQLGRVVVGPYMYTRGRELEHWDEMLSKPKELVKRWHAL 415
The following BLAST results are available for this feature:
BLAST of TCONS_00045831 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT157.555e-5636.81Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=... [more]
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