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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045781 ID=TCONS_00045781|Name=TCONS_00045781|organism=Clytia hemisphaerica|type=transcript|length=1409bp tttttaatttttgataaacttttAATGTATAAGCTTGTAttgttaaatat ctttttaattttgattttaattttgacaatCATCTAATGTTTAagtttgt atttttaaatatcttttggattttgattttaattctttataTTCTTTTAA TGTATAAGCTTGTATTGCTAGTTatcttttggatcctcagatcatAAAGT CGTAATTCTTaggtctagtgttaaaactctacccttccaacctaagttag agcgtTTGTTGCTATAATATTTCATGGGAGTTACCCTTTTTCCTCAAATA CAATGACGTTGATtttggaaggtttagattacggacgTATACAAGACTTC GTCAAGTATTTTGTAGCGGGAGCCCTGGTAACCCAGCcttcgttttcggg gattggcgggtccaactgaATTATTTTTAGGTTAACGTGTAAGgttagtt gaacccgactgcgAGTGAAtaacatcaaaggccgactatcataaTCAACT CCGATGGTAAATTTGCCCGATTCTTTATAACTTCAGCGTGGGCGGCCGGC AATCCGCCATCAAAATATCAGATAAATTTCGGCAATCCACCATCAAAATA TCagataaattttaaataatCTTTTAATGTTTAAGCTTGTATTTAAATTA GTTATctttataattttgattttaattattgataattttttaacgTACAG GGTGTTTCACATAAAAGTATACTGAAAAAGTATGGCAGTTTTTAGAAAGA AGCACTGAACCAATCATCTTGGCTTTTCAGGTTAGCTGAAAGCAGAGCTA CTCAGGTTAAAAATTTactgcaaaaaacttttttgttaaaGAAAATATCA AGTCTTAAtgcagtggcgtggtgggaaaatttttctggggtGGATTAGCA GAATTTGGCGccctttttagagattttttgtttttgacgcCCCCTCTCTA TATACATTTAATTTGGATAGGAATGCAAACTAAGCACAAACATAAACACA AAGAAGAAAAGTGTGTGATCGAAATGAGCCAgcgaaattttgagtttttg aggtgataAAAGGTgtcatttttggtttttcaatgGCTGATCATTCGCTA GGGGCGtctgaaaaatctttctttgcgcCCCTTATCATTCggcgcccctt ctcaaaagggcACCGCTGGTAGGACCTGCCCCCCTGCCACCACATCACTG GGCTTGAGGGTACGACTTTTCAACTTTGGATATCAATTAAGTTCTTCAAG AAAACTTTTGTCATTTAAAAGACTAAGAAGtgtaaaagaaaatgaatttt aaatgcatcagaaaagaaatttaatcTTCTTTTCACTGCTGAACTTTTTT ATATCTCTGATCTGGTGTACTTGAAGTTTCATATTTCTTAAACAAAGAAT GCTTTTGAC Run BLAST on NCBI transcript from alignment at scaffold_100:424399..425807 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045781 ID=TCONS_00045781|Name=TCONS_00045781|organism=Clytia hemisphaerica|type=transcript|length=1409bp|location=Sequence derived from alignment at scaffold_100:424399..425807 (Clytia hemisphaerica) GTCAAAAGCATTCTTTGTTTAAGAAATATGAAACTTCAAGTACACCAGAT
CAGAGATATAAAAAAGTTCAGCAGTGAAAAGAAgattaaatttcttttct
gatgcatttaaaattcattttcttttacaCTTCTTAGTCTTTTAAATGAC
AAAAGTTTTCTTGAAGAACTTAATTGATATCCAAAGTTGAAAAGTCGTAC
CCTCAAGCCCAGTGATGTGGTGGCAGGGGGGCAGGTCCTACCAGCGGTgc
ccttttgagaaggggcgccGAATGATAAGGGgcgcaaagaaagatttttc
agaCGCCCCTAGCGAATGATCAGCcattgaaaaaccaaaaatgacACCTT
TtatcacctcaaaaactcaaaatttcgcTGGCTCATTTCGATCACACACT
TTTCTTCTTTGTGTTTATGTTTGTGCTTAGTTTGCATTCCTATCCAAATT
AAATGTATATAGAGAGGGGgcgtcaaaaacaaaaaatctctaaaaagggC
GCCAAATTCTGCTAATCCaccccagaaaaattttcccaccacgccactgc
aTTAAGACTTGATATTTTCtttaacaaaaaagttttttgcagtAAATTTT
TAACCTGAGTAGCTCTGCTTTCAGCTAACCTGAAAAGCCAAGATGATTGG
TTCAGTGCTTCTTTCTAAAAACTGCCATACTTTTTCAGTATACTTTTATG
TGAAACACCCTGTAcgttaaaaaattatcaataattaaaatcaaaattat
aaagATAACTAATTTAAATACAAGCTTAAACATTAAAAGattatttaaaa
tttatctGATATTTTGATGGTGGATTGCCGAAATTTATCTGATATTTTGA
TGGCGGATTGCCGGCCGCCCACGCTGAAGTTATAAAGAATCGGGCAAATT
TACCATCGGAGTTGAttatgatagtcggcctttgatgttaTTCACTcgca
gtcgggttcaactaacCTTACACGTTAACCTAAAAATAATtcagttggac
ccgccaatccccgaaaacgaagGCTGGGTTACCAGGGCTCCCGCTACAAA
ATACTTGACGAAGTCTTGTATAcgtccgtaatctaaaccttccaaaATCA
ACGTCATTGTATTTGAGGAAAAAGGGTAACTCCCATGAAATATTATAGCA
ACAAacgctctaacttaggttggaagggtagagttttaacactagacctA
AGAATTACGACTTTatgatctgaggatccaaaagatAACTAGCAATACAA
GCTTATACATTAAAAGAAtataaagaattaaaatcaaaatccaaaagata
tttaaaaatacaaactTAAACATTAGATGattgtcaaaattaaaatcaaa
attaaaaagatatttaacaaTACAAGCTTATACATTaaaagtttatcaaa
aattaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00045781-exon-scaffold_100-1491911889:424399..425807 | TCONS_00045781-exon-scaffold_100-1491911889:424399..425807 | Clytia hemisphaerica | exon |
TCONS_00045781-exon-scaffold_100-1510915933:424399..425807 | TCONS_00045781-exon-scaffold_100-1510915933:424399..425807 | Clytia hemisphaerica | exon |
TCONS_00045781-exon-scaffold_100-1575043694:424399..425807 | TCONS_00045781-exon-scaffold_100-1575043694:424399..425807 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_100 | supercontig | scaffold_100:424399..425807 . |
Blast
The following BLAST results are available for this feature:
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