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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045774 ID=TCONS_00045774|Name=TCONS_00045774|organism=Clytia hemisphaerica|type=transcript|length=943bp
NNTATCCTTCGTGTATCCTATTTGCTATTAAACATCGAGCTGTCAGTAAA
GTGTTCAACAAAGCCAagaccaaaaccaaaacaaagctaaGTGAGCAACT
ATCAAAGAAATCTCCTGATGGTCAACCTCCTGGTTGTTGTTGGGGTTTCG
ATTGTGTGTGTACTGCTTGCTCATTTTCTCCATAGCATTGTTATTCTTGA
AACTGATAGAATTCCAGATAAAAAACCCAACGCTTCTTTACTCGTTCGTA
CTTAATTTTCTTGATCAGTTTGTATTGGGATTCAGGAACTATAACATCTG
GTAAATCATTAGAANTATACTGTACTTTGTAATAACAAGAAAAGTGTGTA
AAGAGGGCAGTATAGAGTGATGAGAAAGATcttctttcaaatttgttttt
tttaatatttgaagtcataaaatattttccataaatNTTAGAAGATGATC
TGAAACAAACTCCAATGGTCAAACATATGACACCAAATTTCCAAATCCTT
CTGTTTTGAAAAGTCTTTTGTACTGTTTTCACAATTCAGGATCCTTTGAC
AAACGATGGAATTTAATAGGGCTACCATTTTACAGTCTTTCACAAAAACA
CAAGCTGGAACTGCAGTTACTTTTCATTGTGGGTTGTGAAAACAACTCCA
ATCTGCTAAAAATTTCAGTCTTCTCTAACTTTTCCTCTCAATCTTGCCTT
GTTTTGGTTTGGAATTTTCGCAAGATGGCGCATATCATCGAAAAAGTCCC
TACAGCTAGTTACCAGGCCCTTTTACGGAATGTGGCTAATGTCGATGAAT
CAGACACCATTCCACATATCTGCACCGAGAAAAGTTCCaattccgttact
gtaaccACTGTGAATGGAGATTGATGGTATGCTGCAGATGGGAGTTTGTA
agatcgctcgatttttttagtcaaagcacttgttatacatttt Run BLAST on NCBI transcript from alignment at scaffold_100:110417..111359 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045774 ID=TCONS_00045774|Name=TCONS_00045774|organism=Clytia hemisphaerica|type=transcript|length=943bp|location=Sequence derived from alignment at scaffold_100:110417..111359 (Clytia hemisphaerica)
aaaatgtataacaagtgctttgactaaaaaaatcgagcgatctTACAAAC
TCCCATCTGCAGCATACCATCAATCTCCATTCACAGTggttacagtaacg
gaattGGAACTTTTCTCGGTGCAGATATGTGGAATGGTGTCTGATTCATC
GACATTAGCCACATTCCGTAAAAGGGCCTGGTAACTAGCTGTAGGGACTT
TTTCGATGATATGCGCCATCTTGCGAAAATTCCAAACCAAAACAAGGCAA
GATTGAGAGGAAAAGTTAGAGAAGACTGAAATTTTTAGCAGATTGGAGTT
GTTTTCACAACCCACAATGAAAAGTAACTGCAGTTCCAGCTTGTGTTTTT
GTGAAAGACTGTAAAATGGTAGCCCTATTAAATTCCATCGTTTGTCAAAG
GATCCTGAATTGTGAAAACAGTACAAAAGACTTTTCAAAACAGAAGGATT
TGGAAATTTGGTGTCATATGTTTGACCATTGGAGTTTGTTTCAGATCATC
TTCTAANatttatggaaaatattttatgacttcaaatattaaaaaaaaca
aatttgaaagaagATCTTTCTCATCACTCTATACTGCCCTCTTTACACAC
TTTTCTTGTTATTACAAAGTACAGTATANTTCTAATGATTTACCAGATGT
TATAGTTCCTGAATCCCAATACAAACTGATCAAGAAAATTAAGTACGAAC
GAGTAAAGAAGCGTTGGGTTTTTTATCTGGAATTCTATCAGTTTCAAGAA
TAACAATGCTATGGAGAAAATGAGCAAGCAGTACACACACAATCGAAACC
CCAACAACAACCAGGAGGTTGACCATCAGGAGATTTCTTTGATAGTTGCT
CACttagctttgttttggttttggtctTGGCTTTGTTGAACACTTTACTG
ACAGCTCGATGTTTAATAGCAAATAGGATACACGAAGGATANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045774-exon-scaffold_100-1491911889:110417..111359 | TCONS_00045774-exon-scaffold_100-1491911889:110417..111359 | Clytia hemisphaerica | exon |
| TCONS_00045774-exon-scaffold_100-1510915933:110417..111359 | TCONS_00045774-exon-scaffold_100-1510915933:110417..111359 | Clytia hemisphaerica | exon |
| TCONS_00045774-exon-scaffold_100-1575043694:110417..111359 | TCONS_00045774-exon-scaffold_100-1575043694:110417..111359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_100 | supercontig | scaffold_100:110417..111359 . |
Blast
The following BLAST results are available for this feature:
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