|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045712 ID=TCONS_00045712|Name=TCONS_00045712|organism=Clytia hemisphaerica|type=transcript|length=415bp
ATGCTGGTAATTTGTTAATGGTTTTGTTGTAGTATTAATTCCTGTTACGT
AATAGCGTTGGTAGAGTGAGGCAACCTAAAAGTAAAGAAACAAATTTTTG
ATTCATTGGCAACTTGGAATAAACATTGATTTCACACCACCAAATTCAGC
AACTCTAGATGCTACAAAAGTCACAAAAACAAGAGACATCAATCAACAAT
CAATTGTCATTTGGCTGTCATGACTCGTAAACAATTGTCACTGTGTTACT
CCGAACTCAAAGTCGATGCTACAAAGTATATTCAGATTATATACGATCAA
CAGTAGCTTCATATTGTATTCGTTTCAATCAATTGGTATGCTGTTCATTG
TCAAATTGTCGTCAAAGAAAAACCAACGACTGACGACCATTTAAATTTTG
TTCATAATAGAGtta Run BLAST on NCBI transcript from alignment at scaffold_100:4195..5050- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045712 ID=TCONS_00045712|Name=TCONS_00045712|organism=Clytia hemisphaerica|type=transcript|length=856bp|location=Sequence derived from alignment at scaffold_100:4195..5050- (Clytia hemisphaerica)
ATGCTGGTAATTTGTTAATGGTTTTGTTGTAGTATTAATTCCTGTTACGT
AATAGCGTTGGTAGAGTGAGGCAACCTAAAAGTAAAGAAACAAATTTTTG
ATTCATTGGCAACTTGGAATAAACATTGATTTCACACCACCAAATTCAGC
AACTCTAGATGCTACAAAAGTCACAAAAACAAGAGGTTAGTATAACTTGA
TAAATTTTGAGAGAATACTACTCGAGTACTATACTTCAAAGTCACAGTTT
ATGATTCTCTGCTTAAAAAAATTGACAAATAGGTATATTCTTAACAATGG
TTGGTATTTTTACAGACAATTGGTATAAAATCTATTGAAGTGGTTATCAA
CTTCCAAAAAGAAGTAATTTATCACACGTTTTCTCTGAAAAGAAAATACA
AGTAAATACATCGGGGTGTTTAGTGCTTTTAATTTTATATTTTACTCTGT
TATTTTAGACATCAATCAACAATCAATTGTCATTTGGCTGTCATGACTCG
TAAACAATTGTCACTGTGTTACTCCGAACTCAAAGTCGATGCTACAAAGT
ATATTCAGGTAATTTAATTAAACCTTACAAAACATTTAAAAACCTGAAGG
CTTTTCTATTTTCTTACATAAGAAACTGTCACATTTGCCTACATTTGCTG
AATGTCTCCATTCACCAAATAACTTAGAAAGTTTATATCATCAGATTTTA
TTTTTATTTTTTGTTTTCTCTACTAGATTATATACGATCAACAGTAGCTT
CATATTGTATTCGTTTCAATCAATTGGTATGCTGTTCATTGTCAAATTGT
CGTCAAAGAAAAACCAACGACTGACGACCATTTAAATTTTGTTCATAATA
GAGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045712-exon-scaffold_100-1575043694:4866..5050 | TCONS_00045712-exon-scaffold_100-1575043694:4866..5050 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1575043694:4493..4592 | TCONS_00045712-exon-scaffold_100-1575043694:4493..4592 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1575043694:4195..4324 | TCONS_00045712-exon-scaffold_100-1575043694:4195..4324 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1510915933:4866..5050 | TCONS_00045712-exon-scaffold_100-1510915933:4866..5050 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1510915933:4493..4592 | TCONS_00045712-exon-scaffold_100-1510915933:4493..4592 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1510915933:4195..4324 | TCONS_00045712-exon-scaffold_100-1510915933:4195..4324 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1491911889:4866..5050 | TCONS_00045712-exon-scaffold_100-1491911889:4866..5050 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1491911889:4493..4592 | TCONS_00045712-exon-scaffold_100-1491911889:4493..4592 | Clytia hemisphaerica | exon |
| TCONS_00045712-exon-scaffold_100-1491911889:4195..4324 | TCONS_00045712-exon-scaffold_100-1491911889:4195..4324 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_100 | supercontig | scaffold_100:4195..5050 - |
Blast
The following BLAST results are available for this feature:
|
