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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045671 ID=TCONS_00045671|Name=TCONS_00045671|organism=Clytia hemisphaerica|type=transcript|length=542bp
AAATGGAAAATCATATTAAACTCTTGAACAGTTTTTCAAGCCTATATACC
TCTCAACAGGGTTTTACGAAACAAACAATTATTCaattattctttttttc
ttctttatcttgtagatttgattgattgattgattgattgattgattgat
tgattgatggtTGTTGATTTCATCAAACTTTTCCACTGAACTCAGACATT
CCATTACTACAGGAGGCTTTTGATTGGTTCAAGCTCTTGGTTAAACTTCA
CTTTGGCAAATGAGCGGAACTTGACGCAAAATGTGGCCATTCATCCGTCC
ATCCGCCCTCACGGCCGTCCGTCCGCCCGTCAATCCACCCGCCACAGGAT
TCGTTATTCATGAAAGTTGATCACAAGATGTTCAAGCCATGGATTACGAA
TTGAAACTCCTCGTCCGTCCGAAAAAAACATAACACGTTTGTTTATCATC
AagttcttaaattttcattttaactaAACTTTTTTGGTAATATTTATGCT
AAGTAGATTTATAttcgattttattttattgtacataatgac Run BLAST on NCBI transcript from alignment at scaffold_100:296545..297536+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045671 ID=TCONS_00045671|Name=TCONS_00045671|organism=Clytia hemisphaerica|type=transcript|length=992bp|location=Sequence derived from alignment at scaffold_100:296545..297536+ (Clytia hemisphaerica)
AAATGGAAAATCATATTAAACTCTTGAACAGTTTTTCAAGCCTATATACC
TCTCAACAGGGTTTTACGAAACAAACAATTATTCaattattctttttttc
ttctttatcttgtagatttgattgattgattgattgattgattgattgat
tgattgatggtTGTTGATTTCATCAAACTTTTCCACTGAACTCAGACATT
CCATTACTACAGGAGGtattgaaatttcatttttaatccAAAATGCGTTT
TCATATTATTTTCGCAGAAGTCATAATTTTCGTATTTTCGTaatatttat
tgaaatttgattcttttcttTGAATGATAGTGTACAGACTATTTGAGTAA
AGGCTATAACGTActtttcattattattttcCCAATTTACAGCCCCTTTA
gaaaatacaatatttttttcataagaacattcaaaattactttaatttaa
atttttcattttctccatATTCTGTAAATTCTTGTctatttttcttaaga
aatcgggtgtttaatttccgcaaagctttaaaatgttcttaacttgttct
taatattttagcattCGAAaccattgttcttatatagtttacaTTTATAT
AATATGTGTACTTTTTGTTGACCTTTACATTTCTTATTGGGACCTTTTCG
TTGAATATTTTTCAGGCTTTTGATTGGTTCAAGCTCTTGGTTAAACTTCA
CTTTGGCAAATGAGCGGAACTTGACGCAAAATGTGGCCATTCATCCGTCC
ATCCGCCCTCACGGCCGTCCGTCCGCCCGTCAATCCACCCGCCACAGGAT
TCGTTATTCATGAAAGTTGATCACAAGATGTTCAAGCCATGGATTACGAA
TTGAAACTCCTCGTCCGTCCGAAAAAAACATAACACGTTTGTTTATCATC
AagttcttaaattttcattttaactaAACTTTTTTGGTAATATTTATGCT
AAGTAGATTTATAttcgattttattttattgtacataatgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045671-exon-scaffold_100-1491911889:296545..296759 | TCONS_00045671-exon-scaffold_100-1491911889:296545..296759 | Clytia hemisphaerica | exon |
| TCONS_00045671-exon-scaffold_100-1510915933:296545..296759 | TCONS_00045671-exon-scaffold_100-1510915933:296545..296759 | Clytia hemisphaerica | exon |
| TCONS_00045671-exon-scaffold_100-1575043694:296545..296759 | TCONS_00045671-exon-scaffold_100-1575043694:296545..296759 | Clytia hemisphaerica | exon |
| TCONS_00045671-exon-scaffold_100-1491911889:297210..297536 | TCONS_00045671-exon-scaffold_100-1491911889:297210..297536 | Clytia hemisphaerica | exon |
| TCONS_00045671-exon-scaffold_100-1510915933:297210..297536 | TCONS_00045671-exon-scaffold_100-1510915933:297210..297536 | Clytia hemisphaerica | exon |
| TCONS_00045671-exon-scaffold_100-1575043694:297210..297536 | TCONS_00045671-exon-scaffold_100-1575043694:297210..297536 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_100 | supercontig | scaffold_100:296545..297536 + |
Blast
The following BLAST results are available for this feature:
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