TCONS_00045643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045643
Unique NameTCONS_00045643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3963

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045643 ID=TCONS_00045643|Name=TCONS_00045643|organism=Clytia hemisphaerica|type=transcript|length=3963bp
ATCTCCACTATTGGAAGCTATCGTTAGTGATTCTACTTTCCAAAACACGT
TTTCTTGATTGAAGAAGGTTTTGGAGGGAAAGGTTgtaaaaaatggctaa
aatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTGGCTCTACAAC
AGGGACAACCTGCAAGTGATGGcattattaaaaaagaaagtcCAGTCTCC
AATATTTTACCTATCGCTAAGCTTGAAGGCagagattttgaatatttagt
tcgtcaaaataaaatttctattggaCGAAATAGTAAACTTGGAGATGTCG
ATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACATTTAGAAATT
CGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAAAGAATGGAGT
ATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAAGtaaaactaa
acaaaaaATGTTTTATTCGTTTCCCATCAACCAACATGAAAATTTGGTTC
AGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACCAAGCCCTCCGCG
GACATCAAGATTGAAACCATTGATACCACTACGAATCTCTATACCTAATG
CAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACAGGAACAATTAGC
GTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACACCAACTCATGT
TgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCTGCGTCAGTTG
TAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAAAGAAGAGAAA
CAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGGAAGACACTGA
AGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGCGATGAAGCTA
CCACACCTACTACTCCACTCAATATGAGTATGACAAAGGGACCAGGGCGT
AATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCATTGTTCAAGC
TATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGTATCTATCAAT
TCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAAAGGATGGCAG
AATTCCATTCGACACAACTTGTCGCTTAATCGATATTTCCTCAAAGTCCC
TCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGAGGATTGATCCTT
CTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAACGCAGACAACGT
GGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAagATCTGCACCCGC
ATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTCAAACAACAAC
CACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGAAGAAGAACAA
AAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAGTTCACAGAGC
AAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAAATATCGTCAA
AACCAATGCAACAAGTCAATAATTTCGAACATAATGTCATCACAGGAGGT
CCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTACATTTAAAGG
GGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCCGTTTTCTTCA
CTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGTCATCCAGGCA
GGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCCCACAAAATAC
TTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGAATTCCAGCTA
CTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATCGTTACCACAC
CAACAACTAAAACAAATCggacaaaatataaaaacagtTACACCTTTTCT
TGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTTTTTACACAAC
AGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACATAATAAACTT
CCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAGATATACTTGC
CACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATAAAACAACCGA
CAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCACTTCTATCACT
GATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTGACAAAGCGCA
AGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTACAAGCAGCAAAGA
GAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAAAAGTTGAAAACT
GAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAAGAACATTCGGCT
CGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGGGTTGAGTTGTTT
GTTGATAATACCGTTGATAAAGACAATGGTCAACATCTTTCGGCTGCCGT
GTCTTTTGAACAATCctgttgttgtttgttttttgtttgtttcagtGAAG
CTCGCCCACATTTTCAATGCTCTTTTGATTACGGAAGAATGATCGAACAA
CAAGCCCTTGAGGATAAGCTCTgtacaattttcattttaactCGCTTGAG
GAGTTGTTGTTACCTTTAAAAAACAACTTATTGAAGCCAAGCAGAAGAAA
TTTGGACAATCTGTTTTATCTTACCCGTTCAAAATAAACCCAAATGTTTG
TTGAAATGGTATTCAATGGATTTAACCCACATTGACttcaaatcaacaaa
aatattcaGAACTTGAGTAATGTTTGTGGTGAGATGTTTGGTTCAAACCT
CAAAGGTTTTCGAGACATCAATTTTAACAACCGAGATTAAAAGCACAGtt
taaaagcattttaaaaatGACTGAGAAATANATTTTAACGACCGAAATTA
AGAGCACAGtttaaaagcatttttaaaaatgactgagaaaataaaaacat
caagcAAAGGACGTTGTTtgcttttgtttgtttttttgttatgCATAAGA
AAAGAAGACTTTTTAATGTTCATGTGTGTATATAAAAGTATAGAAAAGGA
TTTTCGAGATATGTTTTACTAACGTTGCTTTTTTCCCAATAATATTACAC
TTATGGCTAGATTCAACCCAATGTGAATACAACTTCCAACACTTCTTGAC
ATTATATATTTGTTGACGCTGCAACGCTTCAGAAacgtaaaaaaaggaaa
aaaggttTTGAGTATGAGCTCTTTAGATTTCCTTCAACCAATGGATGTCA
TTTGCTAACTCGATGAGGGTGTAAAGTTAAGATGTAAAAGAAATGTCAAG
AATGACATTTGATCCCAATTAGCTTTATTTTTCACTAAATTGGACCGTTT
TTGAGCGAGAGTAACTTTATTTTGACTCTTTACTCCTTTTTAGATGATTT
ATTCCAtttcccgcaaaaatttatttagttTCAGTAATATATTGTAccat
ttttgcattttcctaAAAGTATAGATTTCTTTCAAAGTACCTAAAATTTT
TCAGAGatacatttttcaacttttcaactttttatttttagagatACTTG
TTCCATAGTCTTTTTTACTCTAGATAGCttccaaaaatgaaattcagACC
CATTTATCTTTTGCATGGTTCAGTGAAAACATGCAAGTTAATAATTTTGC
AAAATCTTTTTACTTACCTCTGTAAAAAAAGATTCTGcatgaatttttta
aaagtgttaGCCAAAGCATCAGCCCCCTACTAGTTGCACCCTCTAAAGAA
AGACAATCACTGAGTAGTCACTAACCTACTGAAATACCCCCAAACTAAAC
CAACGCCCCTAAATTTTAAGTAATTTACAAATTCAGATATATATTCAACA
TATTATATTTATGATAAGAtactttttaatttattttatagacaaaatct
ttcttttttgatgtAACGTTATTAAAATATACTTCGTTCTTCCTCTTGAG
TGCTCCTAAACAC
Run BLAST on NCBI

protein sequence of TCONS_00045643-protein

>TCONS_00045643-protein ID=TCONS_00045643-protein|Name=TCONS_00045643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=766bp
MAKIPEEHEDPALTLLALQQGQPASDGIIKKESPVSNILPIAKLEGRDFE
YLVRQNKISIGRNSKLGDVDINMGHSSFISRRHLEIRYELPEFYLLTRGK
NGVFVDGHFHRKGSEKVKLNKKCFIRFPSTNMKIWFSSLVDKSFARRVPS
PPRTSRLKPLIPLRISIPNADSVNSSPAPSPTGTISVPNSCPVSPSSRTP
THVAFQQNLTSELLAAASVVNEDIVSSNEIEIKEEKQEENGENLEGEVEE
DTEGMEEFYEKNQELSDEATTPTTPLNMSMTKGPGRNPVEKPPYSYAQLI
VQAIVSAVDKQLTLNGIYQFIMKNYPYYRIGEKGWQNSIRHNLSLNRYFL
KVPRSQDEPGKGSFWRIDPSCEVKLIEQAFRKRRQRGVPCFRPPYISSRS
APASPTHGIMMEPSSVKQQPQSQSNSRSESLSEEEQKPFQQNGKNIPGLV
HRANSDGVLLVTDPSEISSKPMQQVNNFEHNVITGGPLPGLQTLKTTTTT
FKGVTPIVTGPPGAQSVFFTSAKLVPQTMAGQVIQAGSPTTAGQTTFMVP
QNTLKPLDKKVIHHNGIPATQPTILFRSAANPSLPHQQLKQIGQNIKTVT
PFLANGQVLNTHANIVFTQQTSIKSEPTKTIEHNKLPTPPGALLATATSD
ILATLVPTSLQTVSVIKQPTTDLSAIREAKPFTSITDILSSRDVKQTPTD
KAQVANLLKNPVEALQAAKRSYPQLNEASPPKKLKTEGDIQPVPTFSEKN
IRLEEAHTKFQLDAEG
Run BLAST on NCBI

transcript from alignment at scaffold_100:115817..127611+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045643 ID=TCONS_00045643|Name=TCONS_00045643|organism=Clytia hemisphaerica|type=transcript|length=11795bp|location=Sequence derived from alignment at scaffold_100:115817..127611+ (Clytia hemisphaerica)
ATCTCCACTATTGGAAGCTATCGTTAGTGATTCTACTTTCCAAAACACGT TTTCTTGATTGAAGAAGGTTTTGGAGGGAAAGGTTgtaaaaaatggctaa aatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTGGCTCTACAAC AGGGACAACCTGCAAGTGATGGcattattaaaaaagaaagtcCAGTCTCC AATATTTTACCTATCGCTAAGCTTGAAGGCagagattttgaatatttagt tcgtcaaaataaaatttctattggaCGAAATAGTAAACTTGGAGATGTCG ATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACATTTAGAAATT CGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAAAGAATGGAGT ATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAAGtaaaactaa acaaaaagtAAGCTGTTTGCTCTTTTATACCAGACGTCCGCACTCGATTG GATCGATCATctgaacggctcgatgacggatcgatatgtgatcaatggat tacttaacaatccggataggagatcgatggaagattcagccattaaaaag tcttgagtatcgatccttcgttgatccattatcgagctagtatttcaatc gagtataccgattcgtcatgaatcgttaatcgattcgtcatcgatcgtta atcgatttgttatcgatcgttaatcgatttgttatcgatcgtaaatcgag tatgagtcgataagGTCGATAAGATAAGATTGATAAAAGATcaatgatag atcgataaataatcgataactaatcataagcttaaaaaatcttgagtatc gatcctctatcgatctcctatccggatcgttgtgtaatccatcgatcaca tatcgatccgtcatcgagccgttccgatgatcgatcctatcgagcgcgga cgtctggtttATAAAACGTTTAGGAGAGCGCAACATTCTATTAAATAATA AATTATTCCAGCATACATTACTTTCACCCCAGCCAGTACTAACAGGGATG AATTATCTTGTCCCTTGGTAAAAGCTGTGTTGTAAACGACAAATCAATTA AATGACATTATTATTAACAAAATTTATGCTTgaagtaattagttattcaa aaggcTGTTGCATTTTCTCAAAGGACtattaccgtgagtggtcctaaatc tgacagccctgtctaaatccgatggggtcttgcaaagatacaaactaaat aaaaacaaacctttcgctgtgacgcaatgaagataccaaagtgtcaacta aactgagagatttgatacactgactcaattgaaccaaaacattaattgct tcttatacaaagcataattttttattacaaaactgttaacATTTTAAACA CAAGCAACAGAATAATacaggtaattatttttacaactcacacttttttt atcacattaattttgacattttagtcatcttgttaaATGTTTTGGGTTGA GAGTTCTTGCATTATAGTTtaattgttcaacttggagagggagtTTGTAA acgtagaatttttttcatagcagttatttggggggtcaaATTTAGgaagg gctgtcggatttaagGCCACTCAGGGTTATGTCAATGGTCATTTGGTTTG GGAGACAGGCcaccatttgatttgagttaatgaacggcgtattaaaaaat tgcacgatttctcttttgcactgagtaggcttttaaatcgaaatatgaaa aaatccgtagtggaacacacgggATTGGCAAACGNCGATTTCTCTCTTGC ACTGAGtaggctttttaaaaaaatcgaaatatgaaaaaatcatatcatcc accaggatacATCCTGTCTTATTTtacccctattttctactttcctatct tttatcctaattttctgtctttctcgagtgtttctaactgttttctaagt atttttctgaaatttgcccgttcCGGTGAAATAGGTCTCTGACCCCGGCT caaaccaccaaatgcaagcaaccttggtttccaaacccaatgcctaactG CTTGCGAAAATGAGACACGGCATACAAattgtcattcacaaatacttata gcgtgtaatttacagagcTTTATTAaaaaagctcccaaccctactgGTGC CCCGTACAAAGATCCCTATGGGATCCTAAGTTAGGTCTCAGTGTACGGAT GCCCCTAAGCacggaggtataaagaaacaggagaagtacgCTATTgcaac caagctcgccctacgaaaaaaaagttacgatgtatgtatGCTCATAATCT TTTATATCGTGCATTTtcaatgagctcttttatccattggtgaaatctta ttggatcattgaagctttaaaaattagttgagccaagattcattgtttct gaaatcagtgtaagaaaaaatttagactaaaaaaaggcctgtaaacttgg caatccctcgtcaaataataagatttttcgatcaatgttttctttaaggt gaactctattgcttgatactttcctccaaaattctctaGCGATTTTATGT CTACAAGTtgagtctgaaattgtgtgtgcttataaagaacttttcatttt ctggcttgagaaaataattttaaaaacaaaattgaacggataatGAAATG GAACATAACCTTGTGTCGTGGACGacgttttatttaattttcgtatattg aaaggctagaatcttcaatactgataattaaaatgttcagagcaaacttg agttctactaaaaaaatctcatttcatTGGGCGagcttaaaaatttcttt tgatacattttataaaagtaaTCAAAAGACTTTAGACTTTAAGATAATAA CTGAACCCCCATCTAGGTccgcagtttgaaaaatttcacttgcatcctgg tggatgatatagTCTGCCAACCAACACACGCGGGTGTCTGtgaggaacga agaagtatgattgataaacttggtggagctatcaaaacaaatttgttgtc aaagagatttaacagtaataGTAGTTTTTAGTGTTTTCCAgacagaaaca gctgttttgtccagtttttgcgctttttgaagctcaatatctcgagttag gtactgaaatcacctatacttgcaatatatctctaatcctacttttttga gagctttccaaaaatatacccacaaaaatatacaacaggtctccgttttc tcaagctaaaattttcattaatttttaaccctatgatttttgcctgagat cGCNctatgatttttgcctgagaccgtcgtattttcccgaaaatcacacc aaagtgtccgaaaaaaaattggcacccaagttattttgattcccctaccc cttagctttccaaaaatgtataacaagtgctttggctaaaaaaatcgagc gattttacaaatttccccctactattagtTTGAATAGCAAAATATACAAT TAATAACATAAATATCTAAGGTTTCATTCATACTCACTTTCCAAACCCAC TTATTTAAAATAAACACCCTCCCCCTATTTTACAGCCAGTACTAAGGCAA ACATTTTAAAACTATCCAGGTTAAAGTATCCAAAAGAAGTAAAAAGCACT CAAACTCAGTGCCATAATCGAGAAGGAATCTTTTCTGTTATCCTGTCCAT CTCCATTTattaaaattgtgaaaattttccaaccctttAAATCAAACCTC TAAAAATACCTCTATTGATAGACTTTGATTGTTGTGTTTTCCTTTAGATG TTTTATTCGTTTCCCATCAACCAACATGAAAATTTGGTTCAGTTCATTGG TGGACAAATCCTTTGCCAGGAGAGTACCAAGCCCTCCGCGGACATCAAGA TTGAAACCATTGATACCACTACGAATCTCTATACCTAATGCAGATTCAGT AAATTCTTCGCCAGCCCCGTCTCCCACAGGAACAATTAGGTAAAtttgat tattatttttattattgttattatcacaaaatcttgaaaaattttttttt taactaacTGACGAATGCTTGAAAGAGCAGGAAACTTTAAgtattaaaaa gaaaagtttctcTGTTCATTTCTGAACTTATGTATAAAATtgcaacaaaa attcaaaacttcgtTTTTGtagtactttaagtttcatgcgTACTATCGTC AGCTACATATAAAATGTTCTaacttgttgaaaaaaaatgaaagaaacaaa aatgctATTCTCAAGGGTCCGTTAGTCTTTTGACTTGTACATGAATTTAT TCATGTTATATTGTGAAATTAATGACTCGTGACTAGATACCATGTactct ttttttatcattttgggGGTGTATTGAGTAAGTTTCCCTTGAAACAGATT GGCTGTCAAAAAGGGGGCGGTAAGATTTCATTACAGAAGGGAGGACAATG aaatcagaggaatgtaaagagatggaaaaaacAGTTTCTTTAAAACAATG GAAGAATAAACAGACCATTATATGAAAAGCTAGAGCtcaagaaaattata acttcaccttgattttactcgatttctgacagttttacaagaattaattt aatatcatttgtgttaaaaatttcttatacattggtaaaaaaattgctcc ttatttttaaaaattgaactagtaatcagcaaaaaaggaaaaacaaattt tcatttttattgtcaaatcatgtagaaattggattttcatttaatgacct aatcaacgttttttcaatagaagtgattgttgaactttgagtaatcagaa aagctgttttttgaTCTTAACATTCCTCTGATAAAATAAACCTAAGGGTT CATGCCTCTCTGCAAACTATCTATCAAACTCATCTTTCCATGACCAAGAC TAGAATTGGAGATTTCTGCAGAGTTCCAGATCAAATTTTTGCAGACCCTC ACTTTTCTCCTGAAATCAGCATTAAAGGGCCAAAaaattttggacctacc tcagaggtcctttaaattaaccaaTGTTCGTTTGTttgtctgttacaagc ttttttcgggattggctcattagtttttcagATTTATTTGCAGTGATGCA CAATAGTGATGCTCAAGCAAAAactgacagagcctgattttcacgccaaa aatgccggaaaaccCGTTTCCATTAGTTTTAACTGATTTTTTCCACAAAG GTGCGCATTACTGagatgccggaaatatgctgctggacatttgaggttga ctttgaaatactttgaaaagttttgaaaatgttaaaggAGCCGCCAATgt aacaaaaagttttaaagagcatctgaataagaattcttcaaaatgaaaaa taaaagttaaaatgtatgggaagaaggttgattttaaccgtCTCCCCGAA TTTCCTGTATAGAAAATTGTATCACGGCATCCCAAAATTAGTCTAACGGT Agaaaatctgcttaaggtgtgaaaagatgatggttcaacgccgtgatttt ctaaaactttttgcaaaatgtTGTAAACATACACGAAACGAATTAGTGTA TTAAAGGTTTTCTAcgggaataaaaggagcttattttaggcagtgtcttg atgctgagtcagataaattaaagctacttttttacgcaacgatatcctgc aaacaagtgaaagatcgaaagttgtttcgagatgtgacattttattgctt ttgtaaacaaaataataccaaagttgatttcgagcaaatttacaatcgaa tgttttgattataagatagAAAATGTTCTATTCAAACATTCaaaagagta tcagtaaaagtccctttgttcgaggaatgtttttttattcgtttttctaa tcttgtcacacttgtttttactacatcagcatcatcagacctttcaatca aaacaaaacctttaatatatAGAAGATTCTAAGATTCTATTTCATAAATA ATATTTGCAAGTTATATCTATATTGGACATTTTTTGAGGAttggaatttc aaaaatgtatgaCTATGATATTATCATAACTTCATTTCTCACACAAAACT ATTTAAATGTCACAACCATTTGTTTGATCGAATTACCTTTTCTTCTCAAA ATCTTGTTATTAATCTCTGTATTCAATAAATGTCAAATAGTATAATAATA AAGACAAGTAAAACACACGTTGACACTAAAGGAAGATATCTGTCTGCTGT GTGTGTTTTGAAGTGTGATGTTTGATTTTATTCCTTTGATTATTTGGATA CTTTAGTATTCATAGTTTCTATTTTTGCTAACTTAATGGCTGTGGCTTTT GTGTCGAAAATTGATTTGCTGAATCAATGGCAACACAATtggtttaaaat aaaatttatataatTTCTTCCTTAGAAGTTTTTAAAGAACACTGCCTAAA CGTGATATAGATAGGTACCTTGAAAAAGGTTATGGGAGATTATGGTGTGC TATCACACCCACAAAAAGATTAATAGAGTtgtaccttattacacgaaaat aAACATGTAATTAACATGAATTAAAACCCTTTTAATTAAAACTAGCCGTG ACttccatgaaaaataaaataaattttaaattgattgattctcctgaata ttttcaatgtaaagTTCAAACACANaattcttattttttactcTATTTAT AGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACACCAACTCA TGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCTGCGTCAG TTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAAAGAAGAG AAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGGAAGACAC TGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGCGATGAAG CTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGGGACCAGGG CGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCATTGTTCA AGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGTATCTATC AATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAAAGGATGG CAGGTAAAATGATGTTCGACTTTTATGTGTTATTTCTTCTTCTTGGCAGG ACCTTCTtcataaaaacttcaaaatactTGTAATCGTTTTCACAGTTTTT CCACCAGACAGATTTTAGTGACGTATATAAAGAAGGTTTTTTGCCTTAGA AtttattaaaattcagaaaatattgaaaaatgttCTGTATGGGAAGAAAA ACTGAGGTTATAAGTAACATTTAGATTTTTGagtaaaatgtttattttac tGAGCTTttatgtactcttaggtgccaaataaacgacTCCTCCCCGCTAA ttgattttcaaagaattttttcagctgtcaaagagaaggtttcttatttt gctctaaatagcctgattttggcctatatttaccttatttttggggttta caatttccaacccccttcCCAgcaattagccccccccccNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNccccccccccccccgtttatttcgCACCTAAGAGTACT CAGTGAAGTATTGTATGGTTCTATCCACCTTTTTATTTTAGAATTCCATT CGACACAACTTGTCGCTTAATCGATATTTCCTCAAAGTCCCTCGTTCCCA AGACGAACCAGGGAAAGGATCGTTTTGGAGGATTGATCCTTCTTGTGAAG TAAAACTCATCGAACAAGCTTTCCGAAAACGCAGACAACGTGGAGTACCT TGTTTCAGGCCTCCTTACATTTCCTCAaggtttgttttcatttgaCTCTC CACCTCAAATTCTTCCTACTTTTGTATATATTAGTTAGTTTATTTGCAAA TCTGACTTTCGATTCAagaaagtgctctataccatTGGTAGAGCGGTATA TCAGTCAAGAAtatatacaaatttattttccgataGTTTTGTGCCGTTTC AGcgtttcaggcagtcttcagtcagatttttctgaaaatttggctgaaga ctgcctgaaacggcacgaaactccgagtatcggaaaataaatttATCTCT TTTCTTGACTGATATTAGCTAGTTTATGTATGGTACGGAGGatggtagag tgactgaagcgatttggaataaaccacacttctgacccgcaaaatcgggg aggtaaaagtgctgatttaccgtcgtcctcagctggtcaggatctagtca accTTACCGCCACCGTCACAGAataacacacatacataaacttggTATTA TTTTCTATGACTAATAATAACCAGGTTCTGACTGAGACTGATTTTGATCA CATTGTTATGGTGCGTGCAGAGTTACGAGGTCGGAAAGCTCAAGAGCTAT ACCTATATCTTACCCTCATTTCATGGtggtatttatttttaaagcaAAGT TTTTTAGATTCAATCTGCTGTAAATCTAACAATATGGGGTTGCGTTGTAT TCAAAATTAACCAtcatactttttctttttctgttgtAGATCTGCACCCG CATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTCAAACAACAA CCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGAAGAAGAACA AAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAGTTCACAGAG CAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAAATATCGTCA AAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCATCACAGGAGG TCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTACATTTAAAG GGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCCGTTTTCTTC ACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGTCATCCAGGC AGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCCCACAAAATA CTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGAATTCCAGCT ACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATCGTTACCACA CCAACAACTAAAACAAATCggacaaaatataaaaacagtTACACCTTTTC TTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTTTTTACACAA CAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACATAATAAACT TCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAGATATACTTG CCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATAAAACAACCG ACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCACTTCTATCAC TGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTGACAAAGGTA TGTGTTTTCTCTCATTTCTTTAAAAGAGCAGAAACGTTTTATCATTTTTG TAGAAATCTACGTTAAAATAAGACTCTTCTTTGCACTTTCTTATTCACAA TATCCACTTGTTTAAAATCAATATGAATCTTCATTTGAAAGTTAGCAAGG CTGgactttgaaaatgttgatttgcCAGACCGACTGACTCAACCTAAAAG CTGCAGAACCAAAAAAGacttattgccattttaaagaagaatccATTTCT TCAAATCGACCTCTACTATTGTTTCTGTCTTAAGCTTTTAATCGTGAAAT CTCTTCTACTtgctcttttgttttcattttaaaattactcaattgtaaac aaaactgtcactaattaaaataaaaaattttttcaccctacccacctcca aaatcttaTGTCAGGCAAACAAATATTTCAAAGTCCAGCCATACTTCCTT GTTTACTCATGAGATTGTTTGGtttgtttaaaaacttttttagtaAATAT TCCTTATAATTTCAAACCTTCTTTTTAGCGCAAGTTGCAAACCTTCTGAA GAACCCAGTGGAAGCATTACAAGCAGCAAAGAGAAGCTACCCACAGTTAA ACGAAGCATCACCGCCCAAAAAGTTGAAAACTGAGGGCGACATTCAACCC GTACCAACGTTTAGTGAAAAGAACATTCGGCTCGAAGAGGCTCATACGAA ATTTCAATTGGATGCAGAGGGTTGAGTTGTTTGTTGATAATACCGTTGAT AAAGACAATGGTCAACATCTTTCGGCTGCCGTGTCTTTTGAACAATCctg ttgttgtttgttttttgtttgtttcagtGAAGCTCGCCCACATTTTCAAT GCTCTTTTGATTACGGAAGAATGATCGAACAACAAGCCCTTGAGGATAAG CTCTgtacaattttcattttaactCGCTTGAGGAGTTGTTGTTACCTTTA AAAAACAACTTATTGAAGCCAAGCAGAAGAAATTTGGACAATCTGTTTTA TCTTACCCGTTCAAAATAAACCCAAATGTTTGTTGAAATGGTATTCAATG GATTTAACCCACATTGACttcaaatcaacaaaaatattcaGAACTTGAGT AATGTTTGTGGTGAGATGTTTGGTTCAAACCTCAAAGGTTTTCGAGACAT CAATTTTAACAACCGAGATTAAAAGCACAGtttaaaagcattttaaaaat GACTGAGAAATANATTTTAACGACCGAAATTAAGAGCACAGtttaaaagc atttttaaaaatgactgagaaaataaaaacatcaagcAAAGGACGTTGTT tgcttttgtttgtttttttgttatgCATAAGAAAAGAAGACTTTTTAATG TTCATGTGTGTATATAAAAGTATAGAAAAGGATTTTCGAGATATGTTTTA CTAACGTTGCTTTTTTCCCAATAATATTACACTTATGGCTAGATTCAACC CAATGTGAATACAACTTCCAACACTTCTTGACATTATATATTTGTTGACG CTGCAACGCTTCAGAAacgtaaaaaaaggaaaaaaggttTTGAGTATGAG CTCTTTAGATTTCCTTCAACCAATGGATGTCATTTGCTAACTCGATGAGG GTGTAAAGTTAAGATGTAAAAGAAATGTCAAGAATGACATTTGATCCCAA TTAGCTTTATTTTTCACTAAATTGGACCGTTTTTGAGCGAGAGTAACTTT ATTTTGACTCTTTACTCCTTTTTAGATGATTTATTCCAtttcccgcaaaa atttatttagttTCAGTAATATATTGTAccatttttgcattttcctaAAA GTATAGATTTCTTTCAAAGTACCTAAAATTTTTCAGAGatacatttttca acttttcaactttttatttttagagatACTTGTTCCATAGTCTTTTTTAC TCTAGATAGCttccaaaaatgaaattcagACCCATTTATCTTTTGCATGG TTCAGTGAAAACATGCAAGTTAATAATTTTGCAAAATCTTTTTACTTACC TCTGTAAAAAAAGATTCTGcatgaattttttaaaagtgttaGCCAAAGCA TCAGCCCCCTACTAGTTGCACCCTCTAAAGAAAGACAATCACTGAGTAGT CACTAACCTACTGAAATACCCCCAAACTAAACCAACGCCCCTAAATTTTA AGTAATTTACAAATTCAGATATATATTCAACATATTATATTTATGATAAG AtactttttaatttattttatagacaaaatctttcttttttgatgtAACG TTATTAAAATATACTTCGTTCTTCCTCTTGAGTGCTCCTAAACAC

Coding sequence (CDS) from alignment at scaffold_100:115817..127611+

>TCONS_00045643 ID=TCONS_00045643|Name=TCONS_00045643|organism=Clytia hemisphaerica|type=CDS|length=13806bp|location=Sequence derived from alignment at scaffold_100:115817..127611+ (Clytia hemisphaerica)
atggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTGGC
TCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaagaaagtc
CAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagattttgaa
tatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAACTTGG
AGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACATT
TAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAAAG
AATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAAGt
aaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACATGAAAA
TTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACCAAGC
CCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATCTCTAT
ACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACAGGAA
CAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACACCA
ACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCTGC
GTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAAAG
AAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGGAA
GACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGCGA
TGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGGGAC
CAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCATT
GTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGTAT
CTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAAAG
GATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATTTCCTC
AAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGAGGAT
TGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAACGCA
GACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAagATCT
GCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTCAA
ACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGAAG
AAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAGTT
CACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAAAT
ATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCATCA
CAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTACA
TTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCCGT
TTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGTCA
TCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCCCA
CAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGAAT
TCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATCGT
TACCACACCAACAACTAAAACAAATCggacaaaatataaaaacagtTACA
CCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTTTT
TACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACATA
ATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAGAT
ATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATAAA
ACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCACTT
CTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTGAC
AAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTACAAGC
AGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAAAAGT
TGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAAGAAC
ATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGGGTTG
AatggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTGG
CTCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaagaaagt
cCAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagattttga
atatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAACTTG
GAGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACAT
TTAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAAA
GAATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAAG
taaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACATGAAA
ATTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACCAAG
CCCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATCTCTA
TACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACAGGA
ACAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACACC
AACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCTG
CGTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAAA
GAAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGGA
AGACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGCG
ATGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGGGA
CCAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCAT
TGTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGTA
TCTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAAA
GGATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATTTCCT
CAAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGAGGA
TTGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAACGC
AGACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAagATC
TGCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTCA
AACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGAA
GAAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAGT
TCACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAAA
TATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCATC
ACAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTAC
ATTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCCG
TTTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGTC
ATCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCCC
ACAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGAA
TTCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATCG
TTACCACACCAACAACTAAAACAAATCggacaaaatataaaaacagtTAC
ACCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTTT
TTACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACAT
AATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAGA
TATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATAA
AACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCACT
TCTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTGA
CAAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTACAAG
CAGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAAAAG
TTGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAAGAA
CATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGGGTT
GAatggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTG
GCTCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaagaaag
tcCAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagattttg
aatatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAACTT
GGAGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACA
TTTAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAA
AGAATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAA
GtaaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACATGAA
AATTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACCAA
GCCCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATCTCT
ATACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACAGG
AACAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACAC
CAACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCT
GCGTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAA
AGAAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGG
AAGACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGC
GATGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGGG
ACCAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCA
TTGTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGT
ATCTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAA
AGGATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATTTCC
TCAAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGAGG
ATTGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAACG
CAGACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAagAT
CTGCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTC
AAACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGA
AGAAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAG
TTCACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAA
ATATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCAT
CACAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTA
CATTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCC
GTTTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGT
CATCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCC
CACAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGA
ATTCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATC
GTTACCACACCAACAACTAAAACAAATCggacaaaatataaaaacagtTA
CACCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTT
TTTACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACA
TAATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAG
ATATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATA
AAACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCAC
TTCTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTG
ACAAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTACAA
GCAGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAAAA
GTTGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAAGA
ACATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGGGT
TGAatggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTACT
GGCTCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaagaaa
gtcCAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagatttt
gaatatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAACT
TGGAGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAGAC
ATTTAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGA
AAGAATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAA
AGtaaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACATGA
AAATTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACCA
AGCCCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATCTC
TATACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACAG
GAACAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACA
CCAACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGC
TGCGTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCA
AAGAAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAG
GAAGACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAG
CGATGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGG
GACCAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTC
ATTGTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGG
TATCTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAA
AAGGATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATTTC
CTCAAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGAG
GATTGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAAC
GCAGACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAagA
TCTGCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGT
CAAACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAG
AAGAAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTA
GTTCACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGA
AATATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCA
TCACAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACT
ACATTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATC
CGTTTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAG
TCATCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTC
CCACAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGG
AATTCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCAT
CGTTACCACACCAACAACTAAAACAAATCggacaaaatataaaaacagtT
ACACCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGT
TTTTACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAAC
ATAATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCA
GATATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGAT
AAAACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCA
CTTCTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACT
GACAAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTACA
AGCAGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAAA
AGTTGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAAG
AACATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGGG
TTGAatggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTAC
TGGCTCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaagaa
agtcCAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagattt
tgaatatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAAC
TTGGAGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAGA
CATTTAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTGG
AAAGAATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGA
AAGtaaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACATG
AAAATTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTACC
AAGCCCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATCT
CTATACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCACA
GGAACAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAAC
ACCAACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTG
CTGCGTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATC
AAAGAAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGA
GGAAGACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAA
GCGATGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAAG
GGACCAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACT
CATTGTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATG
GTATCTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAA
AAAGGATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATTT
CCTCAAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGGA
GGATTGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAAA
CGCAGACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAag
ATCTGCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCTG
TCAAACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCA
GAAGAAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCT
AGTTCACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCG
AAATATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGTC
ATCACAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTAC
TACATTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAAT
CCGTTTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAA
GTCATCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGT
CCCACAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATG
GAATTCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCA
TCGTTACCACACCAACAACTAAAACAAATCggacaaaatataaaaacagt
TACACCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAG
TTTTTACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAA
CATAATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTC
AGATATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGA
TAAAACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTC
ACTTCTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAAC
TGACAAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTAC
AAGCAGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAAA
AAGTTGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAAA
GAACATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAGG
GTTGAatggctaaaatacCTGAAGAACACGAAGATCCTGCACTAACCTTA
CTGGCTCTACAACAGGGACAACCTGCAAGTGATGGcattattaaaaaaga
aagtcCAGTCTCCAATATTTTACCTATCGCTAAGCTTGAAGGCagagatt
ttgaatatttagttcgtcaaaataaaatttctattggaCGAAATAGTAAA
CTTGGAGATGTCGATATAAATATGGGACATTCTAGTTTTATATCAAGAAG
ACATTTAGAAATTCGATACGAACTTCCTGAATTTTATCTATTAACCCGTG
GAAAGAATGGAGTATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAG
AAAGtaaaactaaacaaaaaATGTTTTATTCGTTTCCCATCAACCAACAT
GAAAATTTGGTTCAGTTCATTGGTGGACAAATCCTTTGCCAGGAGAGTAC
CAAGCCCTCCGCGGACATCAAGATTGAAACCATTGATACCACTACGAATC
TCTATACCTAATGCAGATTCAGTAAATTCTTCGCCAGCCCCGTCTCCCAC
AGGAACAATTAGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAA
CACCAACTCATGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCT
GCTGCGTCAGTTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAAT
CAAAGAAGAGAAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTG
AGGAAGACACTGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTA
AGCGATGAAGCTACCACACCTACTACTCCACTCAATATGAGTATGACAAA
GGGACCAGGGCGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAAC
TCATTGTTCAAGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAAT
GGTATCTATCAATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGA
AAAAGGATGGCAGAATTCCATTCGACACAACTTGTCGCTTAATCGATATT
TCCTCAAAGTCCCTCGTTCCCAAGACGAACCAGGGAAAGGATCGTTTTGG
AGGATTGATCCTTCTTGTGAAGTAAAACTCATCGAACAAGCTTTCCGAAA
ACGCAGACAACGTGGAGTACCTTGTTTCAGGCCTCCTTACATTTCCTCAa
gATCTGCACCCGCATCGCCCACTCATGGCATTATGATGGAACCATCCTCT
GTCAAACAACAACCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTC
AGAAGAAGAACAAAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTC
TAGTTCACAGAGCAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGC
GAAATATCGTCAAAACCAATGCAACAAGTCAATAATTTCGAACATAATGT
CATCACAGGAGGTCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTA
CTACATTTAAAGGGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAA
TCCGTTTTCTTCACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACA
AGTCATCCAGGCAGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGG
TCCCACAAAATACTTTGAAACCTCTTGATAAGAAAGTAATACATCATAAT
GGAATTCCAGCTACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCC
ATCGTTACCACACCAACAACTAAAACAAATCggacaaaatataaaaacag
tTACACCTTTTCTTGCAAATGGACAAGTTCTAAATACGCACGCAAATATA
GTTTTTACACAACAGACCTCTATAAAATCTGAACCTACAAAAACAATAGA
ACATAATAAACTTCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTT
CAGATATACTTGCCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTG
ATAAAACAACCGACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATT
CACTTCTATCACTGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAA
CTGACAAAGCGCAAGTTGCAAACCTTCTGAAGAACCCAGTGGAAGCATTA
CAAGCAGCAAAGAGAAGCTACCCACAGTTAAACGAAGCATCACCGCCCAA
AAAGTTGAAAACTGAGGGCGACATTCAACCCGTACCAACGTTTAGTGAAA
AGAACATTCGGCTCGAAGAGGCTCATACGAAATTTCAATTGGATGCAGAG
GGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029186XLOC_029186Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045643-proteinTCONS_00045643-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045643-exon-scaffold_100-1491911889:115817..116273TCONS_00045643-exon-scaffold_100-1491911889:115817..116273Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:115817..116273TCONS_00045643-exon-scaffold_100-1510915933:115817..116273Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:115817..116273TCONS_00045643-exon-scaffold_100-1575043694:115817..116273Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1491911889:119564..119755TCONS_00045643-exon-scaffold_100-1491911889:119564..119755Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:119564..119755TCONS_00045643-exon-scaffold_100-1510915933:119564..119755Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:119564..119755TCONS_00045643-exon-scaffold_100-1575043694:119564..119755Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1491911889:122419..122869TCONS_00045643-exon-scaffold_100-1491911889:122419..122869Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:122419..122869TCONS_00045643-exon-scaffold_100-1510915933:122419..122869Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:122419..122869TCONS_00045643-exon-scaffold_100-1575043694:122419..122869Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1491911889:123508..123695TCONS_00045643-exon-scaffold_100-1491911889:123508..123695Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:123508..123695TCONS_00045643-exon-scaffold_100-1510915933:123508..123695Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:123508..123695TCONS_00045643-exon-scaffold_100-1575043694:123508..123695Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1491911889:124406..125313TCONS_00045643-exon-scaffold_100-1491911889:124406..125313Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:124406..125313TCONS_00045643-exon-scaffold_100-1510915933:124406..125313Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:124406..125313TCONS_00045643-exon-scaffold_100-1575043694:124406..125313Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1491911889:125845..127611TCONS_00045643-exon-scaffold_100-1491911889:125845..127611Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1510915933:125845..127611TCONS_00045643-exon-scaffold_100-1510915933:125845..127611Clytia hemisphaericaexon
TCONS_00045643-exon-scaffold_100-1575043694:125845..127611TCONS_00045643-exon-scaffold_100-1575043694:125845..127611Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:115817..127611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.4993 14.6324 3.40276 2.56752 92.4945 67.258 41.64 44.8459 19.0431 26.116 22.5905 19.2642 23.9255 25.9177 20.3185 24.7199 25.3588 26.2928 16.0951 13.5903 25.924 26.4202 27.1715 28.9348 44.0867 44.2358 24.008 19.9859 38.9172 35.4926
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR000253FHA_dom
IPR011991WHTH_DNA-bd_dom
IPR018122TF_fork_head_CS_1
IPR030456TF_fork_head_CS_2
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0005515 protein binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Blast
BLAST of TCONS_00045643 vs. Swiss-Prot (Human)
Match: FOXK2 (Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 7.211e-57
Identity = 98/123 (79.67%), Postives = 105/123 (85.37%), Query Frame = 3
Query:  963 KPPYSYAQLIVQAIVSAVDKQLTLNGIYQFIMKNYPYYRIGEKGWQNSIRHNLSLNRYFLKVPRSQDEPGKGSFWRIDPSCEVKLIEQAFRKRRQRGVPCFRPPY--ISSRSAPASPTHGIMM 1325
            KPPYSYAQLIVQAI  A DKQLTLNGIY  I KNYPYYR  +KGWQNSIRHNLSLNRYF+KVPRSQ+EPGKGSFWRIDP+ E KLIEQAFRKRR RGVPCFR P   +SSRSAPASP H  ++
Sbjct:  258 KPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLGPLSSRSAPASPNHAGVL 380          

HSP 2 Score: 142.51 bits (358), Expect = 9.198e-35
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 3
Query:  213 IAKLEGRDFEYLVRQNKISIGRNSKLGDVDINMGHSSFISRRHLEI------------RYELP----------EFYLLTRGKNGVFVDGHFHRKGSEKVKLNKKCFIRFPSTNMKIWFSSLVDKSFARRVPSPPRTSRLKPLI-PLRISIPNADSVNSSPAPSPTGTI 647
            +A+LEGR+FEYL+++  ++IGRNS  G VD++MGHSSFISRRHLEI              ELP          +FYL   GKNGVFVDG F R+G+  ++L + C  RFPSTN+KI F++L  +   ++  S      ++P I PL I+IP+  +   SP PSPTGTI
Sbjct:   37 VARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGHGGAAPELPPAQPRPDAGGDFYLRCLGKNGVFVDGVFQRRGAPPLQLPRVCTFRFPSTNIKITFTALSSEKREKQEASESPVKAVQPHISPLTINIPDTMAHLISPLPSPTGTI 204          
The following BLAST results are available for this feature:
BLAST of TCONS_00045643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXK27.211e-5779.67Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 P... [more]
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