TCONS_00045640 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045640
Unique NameTCONS_00045640
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length936

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045640 ID=TCONS_00045640|Name=TCONS_00045640|organism=Clytia hemisphaerica|type=transcript|length=936bp
TGATGTCTGTGTCCTTTCATCAAGACCTTATGGAACAAGAGCTGTTTTGA
AATTTGCTCACCATACTGGAGCTACTCCAATCGCTGGACGTTTCACACCA
GGAACATTCACCAATCAAATCCAGAAAGCTTTCCGTGAACCACGACTTTT
GGTTGTGACAGATCCCCAATTTGACCATCAATCCATCACTGAATCATCTT
ATGTCAACATTCCAGTCATTGCGCTTTGCAACACTGACTCACCTTCACGA
TTTGTTGATATTGCTATCCCATGTAACAACCGTGGTGTGCAAGCTATTGG
CACCATGTGGTGGATGCTTGCAAGAGAGGTCTTATTCTTGCGTGGAATCA
TCTCTCGCAAAACTCCTTGGGACGTTATGCCTGATTTATACTTCTACCGT
GAACCAGAAGATATTGAAAAGGAAGAACAAGCTGCTGCTCTTGCTGCTGC
CAAACCAGAAGAAACTTATCCACAGACGACCTCATCTGACTGGGTTTCAG
CACCAGCAGCTACCGAGCAAGTTGGTGGAAGCACTGACTGGGGAGAACAA
CCAGCAACAACCACTACTGATTGGGCTTCAGAACCAGTCACTGGAAAAGT
TGAAGGATTTTCTGCAGTTAAAGAAGACGATTGGGGAGCCTCCAACTATA
AATCAGCTGGATGGGAAGCTGATACTACCAACACTACTACCACAGCTGAC
TGGGGTGCTTCGACCACTGAAGGAGATTGGGCGTGATTTTGATTCCATGA
AAAGTCTGTATTGTCGTTCATTTTTCGAAATACAAGAAATCGAAAAAACC
GAAACCATCTTTATCTGATTACTTTAATattcttacacgttttttttttt
tggacctaccccggtgggctgtaggtcctataaattaacctctgttcgtt
cgttcgtccgttcgttactagcttttctcgggattg
Run BLAST on NCBI

transcript from alignment at scaffold_100:76081..85628+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045640 ID=TCONS_00045640|Name=TCONS_00045640|organism=Clytia hemisphaerica|type=transcript|length=9548bp|location=Sequence derived from alignment at scaffold_100:76081..85628+ (Clytia hemisphaerica)
TGATGTCTGTGTCCTTTCATCAAGACCTTATGGAACAGTTAGTATTTTTC AATGTTTCACATATATAACatgtttttttggtaatcattgCTCTCTACTG ACTTATGATTATTTCTGATTTTCCTGCTGAAACCTACAAATTGTATGATG AAAGTTTCAGAGGCTGCTTATGAAGTCAAGAGAATTCTATTTAACTTAGG CGggcatcacaaataacttgtgttcgcgTCGTTTTTAGGTCTAAAAAACA AGTCAGTCAGTCGGTCAAAAGAGTCGGAAAACTAGAAAAAACATCAGTCG GTCGGCCGAGgcgaaaaaatattatttgtgaTGCCCGCCTTAACATTATA CTGaaaaaattttaggaaatttttttgaccaTGGGTACATAAATCTTCCT GTTGACTAGCCCTTTGTTAAACAGNATACGTGCACGTGAATTATTACGTC CTTTTTCAGCCTCACTTGGCGTTTGCCTACACTGTAAGTAGAGCTCCATT TTATATCTGTTTTTCGAGTTTACTCAATCTCAGAATGAAGTTATTTCGCC CCAACTTTGGTAAGTCATTCAACATTGAAATGTCTGGTATTTCAGGTTGT TCGTCGTTACATATTTTGAGCAACTTCGCATAATGTCTGAGGGAATCGAA GCTCTCCAACTCAAAGAGGAAGACGTCACTAAATTTCTTGCTAGTGGTGC TCACTTGGGAGCTCAAAATGTTGACCGTCACTTAGAAAGTTATGTTTACA AAAGGAAAGCTGATGGTATCCATATTATTAACTTGAGAAAGACATGGGAG AAACTTGTCCTTGCTGCTCGCGTCATTGCAGGAATCGAAAATCCAGCTGA TGTCTGTGTCCTTTCATCAAGACCTTATGGAACAGTTAGTATTTTTCAAT GTTTCACATATATAACatgtttttttggtaatcattgCCCGCCTTAACAT TCTAGGCCGATggaatttaatgttatgtttaccGTAAGCCGCCCGGGTGT TCAAAAACCTGCCGCatcaagttgtcattatttgccattttctcgaaaag ttgtcattatttttcctcCCATTTGAgcagagaacaaaaattttcgaagt tgatatcaaaacaaacagcACGTGGCTTTTTTAGATTGTTAACGACCCGA ACAGCCCTCTAGTAGTCTTTACcgtgtgaatttaattttgtcatattgtg gagataacattatataattctctagcgagaagaaaaatatttatctcTTT AAGCTCGTACAAACGGGAAccaaaagaatcaataaaaacacgAGAGTTCC GAGACACAAGAGGAGTAACTCAATGTTAGACTTCAGATTGTGTATCTAta aggaaaaacgaaaaatctggtaaaaataaatgtttatgggaaaataacga ataatgaataatgaaaacttggccgcattgaattctgaaaatcatcatta cggtaaacatatcattaatttccatcagccctactgaaaaaattttagga aatttttttgaccaTGGGTACATAAATCTTCCTGTTGACTAGCCCTTTGT TAAACAATCAAATAACTTAAATTCCTCAAAACAAGGTTGCAAACTTATTA GTGAGGATAAAATTGTCAATTCACTTTTATTCTAGAGAGCTGTTTTGAAA TTTGCTCACCATACTGGAGCTACTCCAATCGCTGGACGTTTCACACCAGG AACATTCACCAATCAAATCCAGAAAGCTTTCCGTGAACCACGACTTTTGG TTGTGACAGATCCCCAATTTGACCATCAATCCATCACTGAATCATCTTAT GTCAACATTCCAGTCATTGCGCTTTGCAACACTGACTCACCTTCACGATT TGTTGATATTGCTATCCCATGTAACAACCGTGGTGTGCAAGCTATTGGCA CCATGTGGTGGATGCTTGCAAGAGAGGTATATAAATTTTCAGTTCTTTTC TATCCAACTATGGCTACATTactaaatctaaaaaataatatttttatttt gatacatAAACAAAAAAGCTTGGTATGTGGCTTCTGGGCAATCTTAGAGG CTttcatttgtaaaaaaatatttagtgtTCAGGATCTTCTCTTTCTGAAC CTGGTGACATTAATGATGATCTAAGTTATCCCTGGCATAAGACAAAGTGT TGAAAACGCACGTCAGACTGAAATGTCACCAGTTATTATTTCAGAAAAAT CTGTCAGGCCTACCTATCCTTATTTACCTTAATTTTAAACATGCTTAGTA AGATGTGTGCAATCTTGTATCCCAAATGCAATGAAAGCTGACCCTAggta aaaaaacagtttttggcAGTTTGACATATCCTGATATTATAAATTTAGCA GATAAGCAGGGGGTGGGATACACAcacttttttacaagaatatgTACAGA TATGTCAACCTCGGTGTGCCCCTGGGTCGTATTATCTGCTTTTTATGTTT TACTGTGGAAGATGATTATAATATCTCAGGCGTAAAACGTAAGTTAAGCT TGGGATATACAATGCTGTTTATAAATGTTGGTTGATAGTTTTAAGTGTTC TAATGGTCAGTTTATGGAATATTCATCCaaaataattcttataaaagtcG ACTTTATTGTATTTTTCCAAGGGTCAAGGTTGAAAGTACATATTGCCTTT GTTACTTAGGGCACTTGGTACGAAATCATGTGCGCTAAAAATGCTTAATA TGTGTATTTTGTCGCTCTCCTACTTTTTTGTTCCTGGAAAAGCCTATCTA AGCCATTTGTTTGCTTGAAATTGTCTGCTAAAAATTACCAATGAAGAATT TAGTTATCCCTGTCATAAAATGAATGTTGAGGGTAAAACTCTGAGGTGTT GTCAAATTTGAATTGAGAACAAAGACATGTCAAAATAGTTATGTTATTGA ATTGTTCAACTCTTGATTATTTCTGATTCCCCTGAAACCTACAAATTGAA TGATGAAAGTTTCAGAGGCTGCTTATGAAGTTGAATtgactttttcaatt tcagatGGATGGCCTCTTTTTAgaagattttctaaaatgttttcAAGTCG GCCTTTCAATTAACTTTTTTCTTGGGACAGGTTTAGCAACTAAGTGGAGC AAGATTTAAGTGTTCTAATGGTCAGTTTATGGACCAATAGGctgacactg tcctgatatgaaacttATGTAAaatgaaaacctttaaattcTTATTCAAC CTATGTTTATTCTTCGCGGTTTTGCTTTAATTGTTAGTTTTAAGACTGCA ATGGTTTTGCAAGCTTTCTTTCGTAGTGATAACAACCTTCTCTCAAATTT TCTGTTTAATTAGACAAGACCAAGCTGGATAATGGAATTCTTGATATGCT TAAGTCATTTTTTAGtggaaacacccaaaaaaaaaacaggatttGACCCC TCTATGttaataaaaatagaaacaagGAGGTCAAAATCTGGCTTTTTTTT GGTGTTTCCCTTAAGAAAGGTGatgtcatcttgacttacgcgtaTCAAAT AGTTTTTTCCAGATATTCTCAATTGAACATGCTGAAACAATAACAAAGCT TAAGCCAGGGGGGTTTgtactaaaatttcagacatgacttttagtgacgt ggtggtattacAAAAAAGGCCTTGTGTAAGTACCatgtaccatgtgtact aaaatcccaaattaggtggggtcttcaagaaatttaagaaaaattttagt acatgagtactaaaaatcaccaaattttaggaaatttaactGTTAGAcaa ttactttttattttctggtttacagaCATTTGGAGATGATATTTTAGacc ggaggatggaaaaaaaaaaaaataaaattgctcttttcaaactttgatgt tggaaaaaattaaaaaaaaatatgttttgagaaAACTTACATACATTAAA GAACGTTTTTAGTAGGAAAATTGTGTTTTAGTTATTAAAGGCCTGGCTGT TCAGTACAAGGTCGGAAGagcataaataaaatatttgtaaaatccaattt tatttttattttatttttgcaaaaaaaacgtcggcgattccgtaaaccag aaaataaaaagtaattgccttatTGACCAAGCATTTtagacaaaatgaaa aaaactttctatGTAAGATTTAAACAACCCTGTGTcacaaattaagcaaa aatttcgtcctcggtggaaaaatacccttgaatttcagccccacagggaa aatgactttgattttatccccactcgaaatttcatgttaaaaaaattgca ctccaaaaccaccccCACTGGGtcttttaaccttggaacaatagaatttc tatcccattaGCATTTTAGTAggtatttttatccccactgaagaaaaagg tcccaccggggctgtgaaacaggggtgtatttaatgttctgattttatat actatggaataaaaaatgttttcgaagtTGAATGCCTTGTTTTTGCGAAA AACCATGGATAACTGAATAGAAAAGAAATGCAGCAAGCTGTAAATTAGAG GTGAAAAATAACCAATAAATCTTTGCAATAACTATAGTAGAGCAGAGCAG AAGTGTCTTGACTGTTTCTGAGTCTTTATCTAGAATAGAGAGATAGATCA TGTTCATTGACAGCTTAAATAACCagcattttgttgaaagtccaaAAACC ACCACTCTCTGAACCGTACGCCAAAATAAGCCTAATTTAGGTGGTCACta tgctaaaatgtcaaaattttagtacatgtgtactataattcaaaaatcat caaaaaaccttttagtactcatatatgtcttggATTTTAGTACAGACCTC CCCCCCTGCTTAAGCATCAGTGATGATCAAAGTTATCCCTGTCTAAAGAC AAAATGTTGAGAACACACATCAGACTGAGATGCTAGATTTGCCAAATATA TTTTGTCATCTATTTCTTGCATCACCTCCACAGATCTCTGACAAACTGGT GATTATTTCCGTTTCCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTGTcacaaattaagc aaaaatttcgtcctcggtggaaaaatacccttgaatttcagccccacagg gaaattgactttgattttatccccactcgaaatttcatgttaaaaaaatt gcactccaaaaccaccccCACTGGatcttttaaccttggaacaatagaat ttctatcccattaGCATTTTAGTAggtatttttatccccactgaggaaaa aggtcccaccggggctgtgaaacaggggtgtatttaatgttctgatttta tatactatggaataaaaaatgttttcgaagtTGAATGCCTTGTTTTTGCG AAAAACCATGGATAACTGAATAGAAAAGAAATGCAGCAAGCTGTAAATTA GAGGTGAAAAATAACCAATAAATCTTTGCAATAACTATAGTAGAGCAGAG CAGAAGTGTCTTGACTGTTTCTGAGTCTTTATCTAGAATAGAGAGATAGA TCATGTTCATTGACAGCTTAAATAACCagcattttgttgaaagtccaaAA ACCACCACTCTCTGAACCGTACGCCAAAATAAGCCTAATTTAGGTGGTCA Ctatgctaaaatgtcaaaattttagtacatgtgtactataattcaaaaat catcaaaaaaccttttagtactcatatatgtcttggATTTTAGTACAGAC CTCCCCCCCTGCTTAAGCATCAGTGATGATCAAAGTTATCCCTGTCTAAA GACAAAATGTTGAGAACACACATCAGACTGAGATGCTAGATTTGCCAAAT ATATTTTGTCATCTATTTCTTGCATCACCTCCACAGATCTCTGACAAACT GGTGATTACTTCCGTTTCCCTTTTGAAACTTACGGACTGAATAATGAAGG TGtatcaggccatattttagaaagataAGGCAGTGTCCGTTGGTGGCCCT AAAGGTcctttttccagtgttttttcactaaaaaggctgtttataccaat attttagtaatttcaaaaTGAGCAACGTCTGATAACAGGCATGAAAAATG GTCTGTGTGTAAAGAAGCATCAGTGATGATCAAAGTTATCCCTGTCATAA GAGAAGTGTTGAGAACGCACGTCAGACTGAGATGCTAGATTTCCAAATTA TGTTAACATAAGATCTCTGACAAACTGGTGGCTAACTCTGTTTCCCTTTT GAAACTTACAAACTGAATAATGAAGGTGTATAAAGAAGCATCAGTGATGA TCAAAGTTATCCCTGTCATAAGACTAAGTGTTGAGAACGCACGTCAGACT GAGATGCTAGATTTCCAAATTNTAAAGAAGCATCAGTGATGATCAAAGTT ATCCCTGTCATAAGACTAAGTGTTGAGAACGCACGTCAGACTGAGATGCT AGATTTCCAAATTATGTTAAGAGTATGGCTTTGAAAAAAGCTCAACCCAG AGTTTATCATCGTTCTCAAAATTGTATGGAGCTAGATGATATACTGACAT TTCTGTCTCTTTTGAAACTGACAAATTGGATGCGGAGCATCAGTGATGAT CAAAGTTATCCCTGTCATAaaacaaaatgttgaaaacgCACGTCAGACTG AGATGCTTACATTCAAATGCATAGAATGAAATTCTGTTTGTTCAtccatt tgtctttttttcttttttccttttctttttttgaacttGACAAACTAGTG ATTATTTCTGATCCCTTTCTGAAACCTACAAATTGAATGATGAAAGTTTC AGAGGCTGCTTATGAAGTTTGTTCAAAAGTTTCCCAATactttttcatac aaaaatcaaagaaactGTTTGTATCCActcaataaataaattttctgcTT TGCAGGTCTTATTCTTGCGTGGAATCATCTCTCGCAAAACTCCTTGGGAC GTTATGCCTGATTTATACTTCTACCGTGAACCAGAAGATATTGAAAAGGA AGAACAAGCTGCTGCTCTTGCTGCTGCCAAACCAGAAGAAACTTATCCAC AGACGACCTCATCTGACTGGGTTTCAGCACCAGCAGCTACCGAGCAAGTT GGTGGAAGCACTGACTGGGGAGAACAACCAGCAACAACCACTACTGATGT AAGTGAAGCTACTTTTCNGCACCAGCAGCTACCGAGCAAGTTGGTGGAAG CACTGACTGGGGAGAACAACCAGCAACAACCACTACTGATGTAAGTGAAG CTACTTTTCCTTAGGTCTAAGGGCCAGTATCCACTTGTGTGCTCTGTGAT TGCACCGTTTGGCTTTAATTCTTTTTTGTCAGAATTACATCATAGAATGA AGTGGTGTTAAAAGTCGAtggaattgttttgtttttcttttgaccaatag agtggaagctttgctcaaaAAATTGACTGTTAACTAGACTTTGAAATTAT TCTGGGGGACAATTCTCAAAACATTTTGTTTGCGTTTTAAGACANTTAAC TAGACTTTGAAATTATTCTGGGGGACAATTCTCAAAACATTTTGTTTGCG TTTTAAGACATGATTCTTTCTATTACATTTTAGTGGGCTTCAGAACCAGT CACTGGAAAAGTTGAAGGATTTTCTGCAGTTAAAGAAGACGATTGGGGAG CCTCCAACTATAAATCAGCTGGATGGGAAGCTGATACTACCAACACTACT ACCACAGCTGACTGGGGTGCTTCGACCACTGAAGGAGATTGGGCGTGATT TTGATTCCATGAAAAGTCTGTATTGTCGTTCATTTTTCGAAATACAAGAA ATCGAAAAAACCGAAACCATCTTTATCTGATTACTTTAATattcttacac gttttttttttttggacctaccccggtgggctgtaggtcctataaattaa cctctgttcgttcgttcgtccgttcgttactagcttttctcgggattg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029185XLOC_029185Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045640-exon-scaffold_100-1491911889:76081..76117TCONS_00045640-exon-scaffold_100-1491911889:76081..76117Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1510915933:76081..76117TCONS_00045640-exon-scaffold_100-1510915933:76081..76117Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1575043694:76081..76117TCONS_00045640-exon-scaffold_100-1575043694:76081..76117Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1491911889:77716..78006TCONS_00045640-exon-scaffold_100-1491911889:77716..78006Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1510915933:77716..78006TCONS_00045640-exon-scaffold_100-1510915933:77716..78006Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1575043694:77716..78006TCONS_00045640-exon-scaffold_100-1575043694:77716..78006Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1491911889:84586..84828TCONS_00045640-exon-scaffold_100-1491911889:84586..84828Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1510915933:84586..84828TCONS_00045640-exon-scaffold_100-1510915933:84586..84828Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1575043694:84586..84828TCONS_00045640-exon-scaffold_100-1575043694:84586..84828Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1491911889:85264..85628TCONS_00045640-exon-scaffold_100-1491911889:85264..85628Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1510915933:85264..85628TCONS_00045640-exon-scaffold_100-1510915933:85264..85628Clytia hemisphaericaexon
TCONS_00045640-exon-scaffold_100-1575043694:85264..85628TCONS_00045640-exon-scaffold_100-1575043694:85264..85628Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:76081..85628 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00045640 vs. Swiss-Prot (Human)
Match: RSSA (40S ribosomal protein SA OS=Homo sapiens GN=RPSA PE=1 SV=4)

HSP 1 Score: 242.276 bits (617), Expect = 1.549e-77
Identity = 138/226 (61.06%), Postives = 157/226 (69.47%), Query Frame = 2
Query:    2 DVCVLSSRPYGTRAVLKFAHHTGATPIAGRFTPGTFTNQIQKAFREPRLLVVTDPQFDHQSITESSYVNIPVIALCNTDSPSRFVDIAIPCNNRGVQAIGTMWWMLAREVLFLRGIISRKTPWDVMPDLYFYREPEDIXXXXXXXXXXXXXXXX------------TYPQTTSSDW---VSAPAATEQVGGSTDWGEQPATTTTDWASEPVTGKVEGFSAVKEDDW 634
            DV V+SSR  G RAVLKFA  TGATPIAGRFTPGTFTNQIQ AFREPRLLVVTDP+ DHQ +TE+SYVN+P IALCNTDSP R+VDIAIPCNN+G  ++G MWWMLAREVL +RG ISR+ PW+VMPDLYFYR+PE+IEKEEQAAA  A   EE            T  Q   +DW   V  P+   Q   + DW  QPA  T DW++ P     E   A    DW
Sbjct:   73 DVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSEGVQVPSVPIQQFPTEDWSAQPA--TEDWSAAPTAQATEWVGATT--DW 294          
The following BLAST results are available for this feature:
BLAST of TCONS_00045640 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSSA1.549e-7761.0640S ribosomal protein SA OS=Homo sapiens GN=RPSA P... [more]
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