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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045591 ID=TCONS_00045591|Name=TCONS_00045591|organism=Clytia hemisphaerica|type=transcript|length=946bp
ACCGTGGTGAGATTCTCAATTAtaaaaatgcaatgaaaagaaTTCGATCA
GAATCgtcttttattcaaaaaagaaaaaccctGCTCAAAATATTATGTAC
AATGTAGTCGTCAGAAAAAGCTCACATAAAGCAAAGGTTGCTTAATTTCC
TTTGTAGAGACGTCTCTTTAAAGGTCTCTTGTGTACTTGGTATCAATATC
ATTATCACTCTTAGAGAGTTTGAGATATCGAAATTTGttcttcatcattt
tcatcatcatcTTCAGTCATCATCATCGTCTTTGTCAAATTTTCGTTTTA
TTTCCGTTATGAGTTCGTTCGTAAAACAGGTCAATAAGTTTGTACTTAAA
ATAATTAGTATTGTAGCATCACTATTTACAGTCGCCAAAGTCTGAAAATT
ACAATTTCTTGCTACAGATTTGCTGTTGTTGTTTGTCGCTGCTGTTGCTG
TCTGCTGTAGTTGTTGGTTGGCTTGTTATTGGCAAGATTCATTAAAATCA
ATCAACCCAttccacaaaaatcttttgattgttGTAGTTTGTCGCCACAC
TCTGATAAGGTTAATTCTTGCTACCAGATTTATTGTTGATTTTGCTGTTG
TTGCTGAGTTGTCGTTACGGCTTGCTAATGGCAGAGTCGCCACACTCTGA
GAAGGTTAATTCTTGCTACCAAATTTGTTGTtgatttgttgttgttgctg
agTTGCTGTTGCGGCTTGCTATTGGCAGAGTCGCCATACTCTGAGAAGGT
TAATTCTTGCTACCAGATTTATTGTTGATTTTGCTGTTGTTGCTGAGTTG
TCGTTACGGCTTGCTATTGGCAGAGTCGCCACACTCTGTAGAGTTGAAAG
TATCAATCTATGCTACCAAATAAGTCAATGCGTAAGATTTGTGTATTGGC
TCGCAAGAGGGTAGGGTCGCCACGCCCTAGGTAACTTGGAGCCACC Run BLAST on NCBI transcript from alignment at scaffold_1:104178..105123 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045591 ID=TCONS_00045591|Name=TCONS_00045591|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at scaffold_1:104178..105123 (Clytia hemisphaerica)
GGTGGCTCCAAGTTACCTAGGGCGTGGCGACCCTACCCTCTTGCGAGCCA
ATACACAAATCTTACGCATTGACTTATTTGGTAGCATAGATTGATACTTT
CAACTCTACAGAGTGTGGCGACTCTGCCAATAGCAAGCCGTAACGACAAC
TCAGCAACAACAGCAAAATCAACAATAAATCTGGTAGCAAGAATTAACCT
TCTCAGAGTATGGCGACTCTGCCAATAGCAAGCCGCAACAGCAActcagc
aacaacaacaaatcaACAACAAATTTGGTAGCAAGAATTAACCTTCTCAG
AGTGTGGCGACTCTGCCATTAGCAAGCCGTAACGACAACTCAGCAACAAC
AGCAAAATCAACAATAAATCTGGTAGCAAGAATTAACCTTATCAGAGTGT
GGCGACAAACTACaacaatcaaaagatttttgtggaaTGGGTTGATTGAT
TTTAATGAATCTTGCCAATAACAAGCCAACCAACAACTACAGCAGACAGC
AACAGCAGCGACAAACAACAACAGCAAATCTGTAGCAAGAAATTGTAATT
TTCAGACTTTGGCGACTGTAAATAGTGATGCTACAATACTAATTATTTTA
AGTACAAACTTATTGACCTGTTTTACGAACGAACTCATAACGGAAATAAA
ACGAAAATTTGACAAAGACGATGATGATGACTGAAgatgatgatgaaaat
gatgaagaaCAAATTTCGATATCTCAAACTCTCTAAGAGTGATAATGATA
TTGATACCAAGTACACAAGAGACCTTTAAAGAGACGTCTCTACAAAGGAA
ATTAAGCAACCTTTGCTTTATGTGAGCTTTTTCTGACGACTACATTGTAC
ATAATATTTTGAGCagggtttttcttttttgaataaaagacGATTCTGAT
CGAAttcttttcattgcatttttaTAATTGAGAATCTCACCACGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045591-exon-scaffold_1-1491911889:104178..105123 | TCONS_00045591-exon-scaffold_1-1491911889:104178..105123 | Clytia hemisphaerica | exon |
| TCONS_00045591-exon-scaffold_1-1510915933:104178..105123 | TCONS_00045591-exon-scaffold_1-1510915933:104178..105123 | Clytia hemisphaerica | exon |
| TCONS_00045591-exon-scaffold_1-1575043694:104178..105123 | TCONS_00045591-exon-scaffold_1-1575043694:104178..105123 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:104178..105123 . |
Blast
The following BLAST results are available for this feature:
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