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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045590 ID=TCONS_00045590|Name=TCONS_00045590|organism=Clytia hemisphaerica|type=transcript|length=1241bp
CTTCCTGAACTGTTTTTACAAATATACCTTCCAGAAATACAAATCCCTTC
CAGAAATCATAGAGGAAGATTGAGGTATGTTGAAGTTAATTAAGTACTGC
TCCTCCAAGGACCTTACGCCATTTCAATGTATCTAAAAGCTATTATAAAA
AGTTAAAGACCAATAGAGTGATAAAAATAGTGCTATATAGCCTTTACAGT
TAAAAAGAAGTTTAACACAGTGTCGTTGAACATAAAACAGCGTCAAAAAC
ATCAACGGGAATGTGCGTGTTGGGCTTGCAATTTGGGTAGGATTTAAAAC
CAGTCAATTAAGAACGCCAGTTTGAAAGTAGGGTGCAACATCGGATGAAT
AAACACCTTTCAGGCGGCTAAAAAAAGGATAGGCTTGCATAAAAATCCAC
AATCATCTTCATTCTTTAGTCCAGCCAAAATAAAACAGCAGAAGGCAGAT
TTGAGGCGGAACATTTCTCCTAAAAAACCTCCCCGAACAAGATGTACAAT
CTACAGATTTTAAAAGCAAAGCCAAAACACTGTTGTTGATTACTTTACAT
GATTATTAAGAATGTGTTTACATTTACAAGTCCATTTTTTCTCCTTCAAT
AGAAAAGGTCAATTGGCCCCTGGTGAGATAAGCTCAAATTGTAAATCCGT
TTTTTTCTAACTAACACTTCCATTCGAAGTAAAAACCTCCAACTAAATAT
AACATTAACAttccaggccatattttagaaaggcagtcCGTTGATgccca
aaaagggcactttttcttgtgtttttctactaaaaaggctgttattacca
aaatttttaatgatttcaGGAGGGACAGTGTCTGACTACCGGACGCTAAA
AgaacatgaaaaatggcctaCATTCCAAAGAAGCAAAAGAAAGCGTCAAA
AATAAGATCCCTAATCATAGCAGACTTGTAATTTACTGTAAATTATggct
aaaataccaaaataaagTCAATAAATCTGAGAAAATAACCAGTTTGTTAC
ACCTGTCAGCTTCAAAGTATTATTTTGatgtaaaagtaaaagtaaaagaa
gGTCTGAAAACAATCCAGGAAAATCCTCATGTAAATCCTATCTGTTCAAA
GTAAGCTGGACAAGACTGGGTACCATGTTACTTGTGTCTTCTCTTAAACT
GTACTGGTAACTAGTGCAAGCATGAAAAGGTCAAAAACGAGACTATGTTC
CAACATGCACTCACCACAAATAGGCTATAAGTCAAAACCAC Run BLAST on NCBI transcript from alignment at scaffold_1:47680..48920 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045590 ID=TCONS_00045590|Name=TCONS_00045590|organism=Clytia hemisphaerica|type=transcript|length=1241bp|location=Sequence derived from alignment at scaffold_1:47680..48920 (Clytia hemisphaerica)
GTGGTTTTGACTTATAGCCTATTTGTGGTGAGTGCATGTTGGAACATAGT
CTCGTTTTTGACCTTTTCATGCTTGCACTAGTTACCAGTACAGTTTAAGA
GAAGACACAAGTAACATGGTACCCAGTCTTGTCCAGCTTACTTTGAACAG
ATAGGATTTACATGAGGATTTTCCTGGATTGTTTTCAGACcttcttttac
ttttacttttacatCAAAATAATACTTTGAAGCTGACAGGTGTAACAAAC
TGGTTATTTTCTCAGATTTATTGActttattttggtattttagccATAAT
TTACAGTAAATTACAAGTCTGCTATGATTAGGGATCTTATTTTTGACGCT
TTCTTTTGCTTCTTTGGAATGtaggccatttttcatgttcTTTTAGCGTC
CGGTAGTCAGACACTGTCCCTCCtgaaatcattaaaaattttggtaataa
cagcctttttagtagaaaaacacaagaaaaagtgccctttttgggcATCA
ACGgactgcctttctaaaatatggcctggaaTGTTAATGTTATATTTAGT
TGGAGGTTTTTACTTCGAATGGAAGTGTTAGTTAGAAAAAAACGGATTTA
CAATTTGAGCTTATCTCACCAGGGGCCAATTGACCTTTTCTATTGAAGGA
GAAAAAATGGACTTGTAAATGTAAACACATTCTTAATAATCATGTAAAGT
AATCAACAACAGTGTTTTGGCTTTGCTTTTAAAATCTGTAGATTGTACAT
CTTGTTCGGGGAGGTTTTTTAGGAGAAATGTTCCGCCTCAAATCTGCCTT
CTGCTGTTTTATTTTGGCTGGACTAAAGAATGAAGATGATTGTGGATTTT
TATGCAAGCCTATCCTTTTTTTAGCCGCCTGAAAGGTGTTTATTCATCCG
ATGTTGCACCCTACTTTCAAACTGGCGTTCTTAATTGACTGGTTTTAAAT
CCTACCCAAATTGCAAGCCCAACACGCACATTCCCGTTGATGTTTTTGAC
GCTGTTTTATGTTCAACGACACTGTGTTAAACTTCTTTTTAACTGTAAAG
GCTATATAGCACTATTTTTATCACTCTATTGGTCTTTAACTTTTTATAAT
AGCTTTTAGATACATTGAAATGGCGTAAGGTCCTTGGAGGAGCAGTACTT
AATTAACTTCAACATACCTCAATCTTCCTCTATGATTTCTGGAAGGGATT
TGTATTTCTGGAAGGTATATTTGTAAAAACAGTTCAGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045590-exon-scaffold_1-1491911889:47680..48920 | TCONS_00045590-exon-scaffold_1-1491911889:47680..48920 | Clytia hemisphaerica | exon |
| TCONS_00045590-exon-scaffold_1-1510915933:47680..48920 | TCONS_00045590-exon-scaffold_1-1510915933:47680..48920 | Clytia hemisphaerica | exon |
| TCONS_00045590-exon-scaffold_1-1575043694:47680..48920 | TCONS_00045590-exon-scaffold_1-1575043694:47680..48920 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:47680..48920 . |
Blast
The following BLAST results are available for this feature:
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