TCONS_00045278 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045278
Unique NameTCONS_00045278
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045278 ID=TCONS_00045278|Name=TCONS_00045278|organism=Clytia hemisphaerica|type=transcript|length=132bp
ACTCCATGCTCTTTTTGTATTGCGGATAAACCGTCTCCCTTTCTTTCGTA
TAATGACAAAACCTCGTCCATCTCTTCATGTGTAAAATCTTCAATTGTGA
TAATTCTTTCACTCGTTcaacaaaaaactaaa
Run BLAST on NCBI

transcript from alignment at sc0007388:238..369

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045278 ID=TCONS_00045278|Name=TCONS_00045278|organism=Clytia hemisphaerica|type=transcript|length=132bp|location=Sequence derived from alignment at sc0007388:238..369 (Clytia hemisphaerica)
tttagttttttgttgAACGAGTGAAAGAATTATCACAATTGAAGATTTTA
CACATGAAGAGATGGACGAGGTTTTGTCATTATACGAAAGAAAGGGAGAC
GGTTTATCCGCAATACAAAAAGAGCATGGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028859XLOC_028859Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045278-exon-sc0007388-1491911889:238..369TCONS_00045278-exon-sc0007388-1491911889:238..369Clytia hemisphaericaexon
TCONS_00045278-exon-sc0007388-1510915933:238..369TCONS_00045278-exon-sc0007388-1510915933:238..369Clytia hemisphaericaexon
TCONS_00045278-exon-sc0007388-1575043694:238..369TCONS_00045278-exon-sc0007388-1575043694:238..369Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007388supercontigsc0007388:238..369 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045278 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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