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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045223 ID=TCONS_00045223|Name=TCONS_00045223|organism=Clytia hemisphaerica|type=transcript|length=1065bp
CGGATGGATCGAGGACAAATCTATCCAAAAGGTACTTTATGGCTTCGTAG
AGCAAAGGCTGTGCAATTTGAGAACTGGCTACAGGGTGACAACATGTaga
catttttttatatttattagcGCCTTTTCATGTTAGTCAAGAGAGATAat
ctaaaaaactaaaaaaattcgaaaaattctcAGGATGTATTAATTAGTGA
ANAGCGCCTTTTCATGTTAGTCAAGAGAGATAatctaaaaaactaaaaaa
attcgaaaaattctcAGGATGTATTAATTAGTGAAAAAACACAAATTAGA
CCAAAAACCGTTAAAAACAGCCTTTCGTTCCTTTTGGTTTTAGATTAGAC
GGCCGTTCAGTGGTGTGGTCAACTGATGAACCGATCGCAAGATGAGTTTT
GTAAAGCCATCAAAAAGTTGAACTAATCTATATTTGGGTTAATATTCAGA
GACTTTAAGTTACCACGAATTGTAACAATAGACTAGGTTATTTTTATAGT
ACTTTGGTTCAATTTTCAACGGACACCCTGTAGAGAACTAACGTaaaaat
attcaatcataaaaagggtttaaaatcatattcaaaatgGTTTacacatg
aaaaaaaaaactatcaaaaagaacagaaaagtaggcaaagtgttaaaaaa
acaaaaacaaatacgAAAAAGTCATCTAAAATACTTTATTTAGTCCTATT
TACAACTCAAGAGTTAATCATTAACCCTCTCGTAGGGGGCTGCATTCGGA
AAGTATTATAAAAGGAGAAGAGGAACTgctctttctttattttatcattt
cttCAAACTACACTTTTTAAACGCGCAAACGGTGATGATGTTGCAGTTTG
AAAATGCTAAGATAGGACAGAACACCCTTTGTAAAAGAACGAGTTCTTAA
TGAAAGGTCGCTCACGTCATGTTGCGTCAAAATGAAGCGGTTTTACTCTT
TCCAAATATGAAAAAACTTTCACCCACCTCATTATTAGCGGATTCAAGaa
gtttttctccaaaataGATCAATATTGATCTGAGAGTGTCTTAAATTAAT
CTGGTAACAAAGCAT Run BLAST on NCBI transcript from alignment at sc0007235:2..1066 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045223 ID=TCONS_00045223|Name=TCONS_00045223|organism=Clytia hemisphaerica|type=transcript|length=1065bp|location=Sequence derived from alignment at sc0007235:2..1066 (Clytia hemisphaerica)
ATGCTTTGTTACCAGATTAATTTAAGACACTCTCAGATCAATATTGATCt
attttggagaaaaacttCTTGAATCCGCTAATAATGAGGTGGGTGAAAGT
TTTTTCATATTTGGAAAGAGTAAAACCGCTTCATTTTGACGCAACATGAC
GTGAGCGACCTTTCATTAAGAACTCGTTCTTTTACAAAGGGTGTTCTGTC
CTATCTTAGCATTTTCAAACTGCAACATCATCACCGTTTGCGCGTTTAAA
AAGTGTAGTTTGaagaaatgataaaataaagaaagagcAGTTCCTCTTCT
CCTTTTATAATACTTTCCGAATGCAGCCCCCTACGAGAGGGTTAATGATT
AACTCTTGAGTTGTAAATAGGACTAAATAAAGTATTTTAGATGACTTTTT
cgtatttgtttttgtttttttaacactttgcctacttttctgttcttttt
gatagttttttttttcatgtgtAAACcattttgaatatgattttaaaccc
tttttatgattgaatatttttACGTTAGTTCTCTACAGGGTGTCCGTTGA
AAATTGAACCAAAGTACTATAAAAATAACCTAGTCTATTGTTACAATTCG
TGGTAACTTAAAGTCTCTGAATATTAACCCAAATATAGATTAGTTCAACT
TTTTGATGGCTTTACAAAACTCATCTTGCGATCGGTTCATCAGTTGACCA
CACCACTGAACGGCCGTCTAATCTAAAACCAAAAGGAACGAAAGGCTGTT
TTTAACGGTTTTTGGTCTAATTTGTGTTTTTTCACTAATTAATACATCCT
gagaatttttcgaatttttttagttttttagatTATCTCTCTTGACTAAC
ATGAAAAGGCGCTNTTCACTAATTAATACATCCTgagaatttttcgaatt
tttttagttttttagatTATCTCTCTTGACTAACATGAAAAGGCgctaat
aaatataaaaaaatgtctACATGTTGTCACCCTGTAGCCAGTTCTCAAAT
TGCACAGCCTTTGCTCTACGAAGCCATAAAGTACCTTTTGGATAGATTTG
TCCTCGATCCATCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045223-exon-sc0007235-1491911889:2..1066 | TCONS_00045223-exon-sc0007235-1491911889:2..1066 | Clytia hemisphaerica | exon |
| TCONS_00045223-exon-sc0007235-1510915933:2..1066 | TCONS_00045223-exon-sc0007235-1510915933:2..1066 | Clytia hemisphaerica | exon |
| TCONS_00045223-exon-sc0007235-1575043694:2..1066 | TCONS_00045223-exon-sc0007235-1575043694:2..1066 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007235 | supercontig | sc0007235:2..1066 . |
Blast
The following BLAST results are available for this feature:
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