|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045202 ID=TCONS_00045202|Name=TCONS_00045202|organism=Clytia hemisphaerica|type=transcript|length=1099bp
TTCTTCTTGGGAGTTGGCTGATTTTGCTAAAGTCTTGTACATGTAGTTCC
TTGAGTGAGTCCTTGGGgcattcttcttcatttttttttttgggggggtg
GCTGATTTTGCTAAAGTTTGTACAGTTAAGCTCCTTTGGTGAGTCCTTGG
GGCATTCTCCTTCATTCTTCTTGGGAGTTGGCTGATTTGCTAAAGTTTTG
CACATTTAAGTCCCTTGGGTATAAGTCCTTGGGGCATTCCTctcattttt
aattgaatttaGATGGGAAGGACGACCCCATAGGTTCTGGCATACCTTGG
TCAATACTATGAAGTAGTTAATATTTTGCATGCTTGTTCCTTGGAATCCT
AGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATNNNNNNNNNNNNNNNNN
NNCTGGCATACCTTGGTCAATACTATGAAGTAGTTAATATTTTGCATGCT
TGTTCCTTGGAATCCTAGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATT
GGTGCGAATGTTGCACACAAGTTCTTCAGTGTATCCCTGGGTGTGCTTCA
TACTCTATTGGATTTTGGGGGTGGGGTTACTGGTTTTTGTCCTAAACTTA
CAAAAATGtgggcaggctggagacctCGAAATTGTCTGAATCCGCTTCAA
TTTCGAGCACATTGCGCTTTGGGTGAATTCACTGGGGcatttccccattt
ttcaattttgcaatTTAGTTTTAGGGTCACCAATTAAAGGCCGAGAACTA
AGTCGAAATTTGGACATACTGGGGATCTCTGAAGTGTTTGaaaggcaaaa
atttgcaatcatggtccttgggtgaatccctgaattagtttttcttcatt
ttcaatgtgaTATGATTCAAGGGTGTTGTCACACCCCATAACGCCAATAT
ATAACACCATTACTTAGTTTACTTAGTTTACAGGATACTTTAGAGTGATT
CGATCTGGCTGGAATTTTGCATATTGCTCCTTGGGTAATTCCTCAGTCCT
AATTAGTATGGGTCTACAATTGGCCTCTGGGAGACTATGAAGATGCCGAA
GCTGAGCTGGTGTTGTAAGCACCTCCAAAACTGTCCATTGGGGGATAAT Run BLAST on NCBI transcript from alignment at sc0007186:1..1099 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045202 ID=TCONS_00045202|Name=TCONS_00045202|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at sc0007186:1..1099 (Clytia hemisphaerica)
ATTATCCCCCAATGGACAGTTTTGGAGGTGCTTACAACACCAGCTCAGCT
TCGGCATCTTCATAGTCTCCCAGAGGCCAATTGTAGACCCATACTAATTA
GGACTGAGGAATTACCCAAGGAGCAATATGCAAAATTCCAGCCAGATCGA
ATCACTCTAAAGTATCCTGTAAACTAAGTAAACTAAGTAATGGTGTTATA
TATTGGCGTTATGGGGTGTGACAACACCCTTGAATCATAtcacattgaaa
atgaagaaaaactaattcagggattcacccaaggaccatgattgcaaatt
tttgcctttCAAACACTTCAGAGATCCCCAGTATGTCCAAATTTCGACTT
AGTTCTCGGCCTTTAATTGGTGACCCTAAAACTAAattgcaaaattgaaa
aatggggaaatgCCCCAGTGAATTCACCCAAAGCGCAATGTGCTCGAAAT
TGAAGCGGATTCAGACAATTTCGaggtctccagcctgcccaCATTTTTGT
AAGTTTAGGACAAAAACCAGTAACCCCACCCCCAAAATCCAATAGAGTAT
GAAGCACACCCAGGGATACACTGAAGAACTTGTGTGCAACATTCGCACCA
ATCAACCTCTAGGGGGAATAACAAAACACTCCTAGGATTCCAAGGAACAA
GCATGCAAAATATTAACTACTTCATAGTATTGACCAAGGTATGCCAGNNN
NNNNNNNNNNNNNNNNATCAACCTCTAGGGGGAATAACAAAACACTCCTA
GGATTCCAAGGAACAAGCATGCAAAATATTAACTACTTCATAGTATTGAC
CAAGGTATGCCAGAACCTATGGGGTCGTCCTTCCCATCtaaattcaatta
aaaatgagAGGAATGCCCCAAGGACTTATACCCAAGGGACTTAAATGTGC
AAAACTTTAGCAAATCAGCCAACTCCCAAGAAGAATGAAGGAGAATGCCC
CAAGGACTCACCAAAGGAGCTTAACTGTACAAACTTTAGCAAAATCAGCc
acccccccaaaaaaaaaaatgaagaagaatgcCCCAAGGACTCACTCAAG
GAACTACATGTACAAGACTTTAGCAAAATCAGCCAACTCCCAAGAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045202-exon-sc0007186-1491911889:1..1099 | TCONS_00045202-exon-sc0007186-1491911889:1..1099 | Clytia hemisphaerica | exon |
| TCONS_00045202-exon-sc0007186-1510915933:1..1099 | TCONS_00045202-exon-sc0007186-1510915933:1..1099 | Clytia hemisphaerica | exon |
| TCONS_00045202-exon-sc0007186-1575043694:1..1099 | TCONS_00045202-exon-sc0007186-1575043694:1..1099 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007186 | supercontig | sc0007186:1..1099 . |
Blast
The following BLAST results are available for this feature:
|
