TCONS_00045093 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045093
Unique NameTCONS_00045093
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045093 ID=TCONS_00045093|Name=TCONS_00045093|organism=Clytia hemisphaerica|type=transcript|length=124bp
CCTCCTTTCTTGCAAGTGAGTTTCTGTTGAATAACACATTCGATTTCACC
ACAGTTGATTCCCTTGTACGGTGGAACACATCTGCATTTTCCACAGTCAC
ATTCTCCCCGTTTTTCAGTCTCTG
Run BLAST on NCBI

transcript from alignment at sc0006890:962..1085

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045093 ID=TCONS_00045093|Name=TCONS_00045093|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at sc0006890:962..1085 (Clytia hemisphaerica)
CAGAGACTGAAAAACGGGGAGAATGTGACTGTGGAAAATGCAGATGTGTT
CCACCGTACAAGGGAATCAACTGTGGTGAAATCGAATGTGTTATTCAACA
GAAACTCACTTGCAAGAAAGGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028676XLOC_028676Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045093-exon-sc0006890-1491911889:962..1085TCONS_00045093-exon-sc0006890-1491911889:962..1085Clytia hemisphaericaexon
TCONS_00045093-exon-sc0006890-1510915933:962..1085TCONS_00045093-exon-sc0006890-1510915933:962..1085Clytia hemisphaericaexon
TCONS_00045093-exon-sc0006890-1575043694:962..1085TCONS_00045093-exon-sc0006890-1575043694:962..1085Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006890supercontigsc0006890:962..1085 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045093 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top