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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045013 ID=TCONS_00045013|Name=TCONS_00045013|organism=Clytia hemisphaerica|type=transcript|length=459bp
ATTTTGGCCAGTGCTTCCTTGGGATGGGTTGCCACCTCGGAAATCCTATA
ATAAGGAAGACAACATCGAACGGAATAAACTGAAGAACAACCCCGTAAGT
CCGTCCGAGCGTTGGGCTCAGATTAAAGCTGAGCAAGAAGAGCCTGATTG
GGATGACGAATTGAATTGTTCGGAATTGTCGGATTCAGCCGAAGTGATTG
AGTAGCTCGATTCACTCGTCCTGTCGCCAGAAGTAATTGAAAGCTGAGCG
TGGACAATCGCAGCACCATCTTGTCAACCATCAGAATGTTGAACCGTGAA
ATATaatgattttttgtttcttttatacACCTCACAAAAATTTCGTTTGT
TATTTCCTTTCCTCCACAGCTTCCTTTGTTTCGTCACAATACATATAGTA
CAAACTTTTGCGGTACTTCGGTTACCATGATTGCAACTCTTTTAAAATTA
ATGAGTCTT Run BLAST on NCBI transcript from alignment at sc0006680:1..1277- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045013 ID=TCONS_00045013|Name=TCONS_00045013|organism=Clytia hemisphaerica|type=transcript|length=1277bp|location=Sequence derived from alignment at sc0006680:1..1277- (Clytia hemisphaerica)
ATTTTGGCCAGTGCTTCCTTGGGATGGGTTGCCACCTCGGAAATCCTATA
ATAAGGAAGACAACATCGAACGTAAGTGGAAAAATTCTATATTAATTTAC
AATCAAATATTAAATATTAAAACGTCCTAAAGTTCTCTGATACCAGATCA
TTGAACCAAATAAATAAAATACTACAAAAAAAAATTTTAATCGACAAATT
CTAATCAAATTTTATATACAAATCTTCATTTTATGATTCACTAATAACAT
TCTTGTTACAGTTCCTGATGGTTTTTCTTCATTACTTTTCAGGGAATAAA
CTGAAGAACAACCCCGTAAGTCCGTCCGAGCGTTGGGCTCAGATTAAAGC
TGAGCAAGAAGAGCCTGATTGGGATGACGAATTGAATTGTTCGGAATTGT
CGGATTCAGCCGAAGTGATTGAGTAGCTCGGTAAGTTTTCATTTGTTTGC
AATACTTCCGGCCATTGCTCATGTACGGGAGCTCCTCGTTGCAGTGGTTG
AGGCGGTTTCTCATATCTCCACACCGTAAACGCTCCGAATTTTTCTTTCC
TCAATCCCATTCGACGAAGATAATCAGCTCTGTATTCTTCTGTTGTCAAA
CGTATTAAGATATCTAGTCGGCGGTCTTCTTCCCTGATATTGCTTGCTTC
TTTGGGTGATCTTCTTTTAAGTCTTGTCAAGATTATCTCACTGTGCATCC
TTCCAAAATACGAAAGAATAAGTTGGGGTTTTGTGTTTATTATATCCCTT
TGCAGTTCGATACAGGGTGCTATCNNNNNTTCTTTTAAGTCTTGTCAAGA
TTATCTCACTGTGCATCCTTCCAAAATACGAAAGAATAAGTTGGGGTTTT
GTGTTTATTATATCCCTTTGCAGTTCGATACAGGGTGCTATCTTCAGCTG
TATAAATTGAAAGCGAATTCTTGTGATTGTGTCTTGATTGATCGCTCACC
ATGAGGACGACTCGTATTTTCTTTAACAGCATGGCCTGTTGCTTCTGTGA
CATAATTTTATCCATCTTGATTTCTAGATTCACTCGTCCTGTCGCCAGAA
GTAATTGAAAGCTGAGCGTGGACAATCGCAGCACCATCTTGTCAACCATC
AGAATGTTGAACCGTGAAATATAATGATTTTTTGTTTCTTTTATACACCT
CACAAAAATTTCGTTTGTTATTTCCTTTCCTCCACAGCTTCCTTTGTTTC
GTCACAATACATATAGTACAAACTTTTGCGGTACTTCGGTTACCATGATT
GCAACTCTTTTAAAATTAATGAGTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045013-exon-sc0006680-1575043694:1207..1277 | TCONS_00045013-exon-sc0006680-1575043694:1207..1277 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1575043694:848..985 | TCONS_00045013-exon-sc0006680-1575043694:848..985 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1575043694:1..250 | TCONS_00045013-exon-sc0006680-1575043694:1..250 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1510915933:1207..1277 | TCONS_00045013-exon-sc0006680-1510915933:1207..1277 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1510915933:848..985 | TCONS_00045013-exon-sc0006680-1510915933:848..985 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1510915933:1..250 | TCONS_00045013-exon-sc0006680-1510915933:1..250 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1491911889:1207..1277 | TCONS_00045013-exon-sc0006680-1491911889:1207..1277 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1491911889:848..985 | TCONS_00045013-exon-sc0006680-1491911889:848..985 | Clytia hemisphaerica | exon |
| TCONS_00045013-exon-sc0006680-1491911889:1..250 | TCONS_00045013-exon-sc0006680-1491911889:1..250 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006680 | supercontig | sc0006680:1..1277 - |
Blast
The following BLAST results are available for this feature:
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