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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044984 ID=TCONS_00044984|Name=TCONS_00044984|organism=Clytia hemisphaerica|type=transcript|length=345bp
ctttagagcacttacaaatcgcttgtggttcaaaaacttcccggtgtatt
tctcttttttctcaaatattatgaccttgattgcagCTGCGAGGATATAC
ACGTTTTGTATCTTCATTTATATGTgactttgaaatgttttttgtaTGTT
CTCACTATTCAatgattttctttcattttcaggtTTATTCAGGACGAAAT
TTGATCAAGAAAGGTCATCTTCTTGGTACTTTCAAGATTGACCTTGGAAC
CATCTACCATCAGCCAGACCACAGGTTCATTCGTAAATATGCGTGTCTTT
CACATCCGAACGAAACTCTTGGAACAAGTGGAGCTGGAATCaaag Run BLAST on NCBI transcript from alignment at sc0006599:268..1651- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044984 ID=TCONS_00044984|Name=TCONS_00044984|organism=Clytia hemisphaerica|type=transcript|length=1384bp|location=Sequence derived from alignment at sc0006599:268..1651- (Clytia hemisphaerica)
CTTTAGAGCACTTACAAATCGCTTGTGGTTCAAAAACTTCCCGGTGTATT
TCTCTTTTTTCTCAAATATTATGACCTTGATTGCAGCTGCGAGGATATAC
ACGTTTTGTATCTTCATTTATATGTGACTTTGAAATGTTTTTTGTATGTT
CTCACTATTCAATGATTTTCTTTCATTTTCAGGTTTATTCAGGACGAAAT
TTGATCAAGAAAGGTCATCTTCTTGGTACTTTCAAGGTAAATGTTTTTCA
ACTTAAAGACATTTTTGGATGTTCTAAAGTAACTCAAATCATTTTTTCTG
TATCTTTTGAAAATTGAAGTTTTGAATAAATCCACTCGAATTTATTCCTC
CAACGAGGTATTACTTTTAATCACAATATTGTATTTCTTTCAAAAGAAAT
GTATCAAAATGTTGCTCTGTACCCCATTTATATATATTAAAAAATATTTC
AGGGAAACTTTATCTTTTAAATAATTTTCAATTTAATCCACTCGAATTTA
TTTCTCCAACGAGGTATTACTTTTAATCATAATATATTGTTTTTCTTTCA
AGAGAAATGTATCAAAATGTAGCTCTGTACCCCATTTATATTATATTTAT
TTATTTATATTAAAAAGATTTTTCAAAGGAAATTTTATCATTTAAATAAT
TTTCAAATTAATCCACTGGAATTTATTTCTCTAACGAAGTATTAATTTTT
AATCATAATAATAATATTGTTTTTCTTTCAAAATAAATGTATCAAAATGT
TGCTCTGTACCCCATTTATATATATTATAAAAATATTTCAAGGAAATTCT
ATCTTTTAAATAATTCTTAAATTAATCCACTCGAATTTATTTCTACAACG
AGGCATTACTTTTTATTCATAATATTGTTTTTCTTTCAAAAGCAATATAT
CAAAATCTCATTTTTATACAGAAGATGACTAAACTCTTTACACGCTTTTT
TTATAAGAACATCCAAAATTTTTGAAGCCTTTGTATGTTCTTAACTTTTT
GAGTTTTAAGCCTAAAAATGTTATTTTGAGTATTTTTGTCCATTTTCTTA
AGAAATCGGGTGTTTTAGAGTCCGCAAAGCCTTAAAATATTCTTAACATG
TTCTTGATTTTGGCTATCGAAACCTTATGTTCTTATATAGTTTGTTTCTT
ATAAAAAACGTGTACCCCATTTATCTATATTAAAAAAGTTTCAAGGAAAT
CGCTATCTTTCAAATAATTCTCTTTAGAATAATGCAGTTTTCAAAATCGA
AAAACCTATATTCCAATTTATTTAGATTGACCTTGGAACCATCTACCATC
AGCCAGACCACAGGTTCATTCGTAAATATGCGTGTCTTTCACATCCGAAC
GAAACTCTTGGAACAAGTGGAGCTGGAATCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044984-exon-sc0006599-1575043694:1416..1651 | TCONS_00044984-exon-sc0006599-1575043694:1416..1651 | Clytia hemisphaerica | exon |
| TCONS_00044984-exon-sc0006599-1575043694:268..376 | TCONS_00044984-exon-sc0006599-1575043694:268..376 | Clytia hemisphaerica | exon |
| TCONS_00044984-exon-sc0006599-1510915933:1416..1651 | TCONS_00044984-exon-sc0006599-1510915933:1416..1651 | Clytia hemisphaerica | exon |
| TCONS_00044984-exon-sc0006599-1510915933:268..376 | TCONS_00044984-exon-sc0006599-1510915933:268..376 | Clytia hemisphaerica | exon |
| TCONS_00044984-exon-sc0006599-1491911889:1416..1651 | TCONS_00044984-exon-sc0006599-1491911889:1416..1651 | Clytia hemisphaerica | exon |
| TCONS_00044984-exon-sc0006599-1491911889:268..376 | TCONS_00044984-exon-sc0006599-1491911889:268..376 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006599 | supercontig | sc0006599:268..1651 - |
Blast
The following BLAST results are available for this feature:
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