TCONS_00044918 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044918
Unique NameTCONS_00044918
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044918 ID=TCONS_00044918|Name=TCONS_00044918|organism=Clytia hemisphaerica|type=transcript|length=177bp
CTAGTTTAGAACCTTTGCTACATACTTTCCATCTTTAAAATaaagttctt
ttttaaattcgaTTTGAACAAGCGTATAAAGAGGAAGCTCTGAAGTGTTC
TTCAATTTGTATCTCAGTGTGTTCAAACCGTCCGAATACATTCGTTGTGT
TGAATTCCTCAGCAACTCCACTCTGAA
Run BLAST on NCBI

transcript from alignment at sc0006465:1465..1641

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044918 ID=TCONS_00044918|Name=TCONS_00044918|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at sc0006465:1465..1641 (Clytia hemisphaerica)
TTCAGAGTGGAGTTGCTGAGGAATTCAACACAACGAATGTATTCGGACGG
TTTGAACACACTGAGATACAAATTGAAGAACACTTCAGAGCTTCCTCTTT
ATACGCTTGTTCAAAtcgaatttaaaaaagaactttATTTTAAAGATGGA
AAGTATGTAGCAAAGGTTCTAAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028516XLOC_028516Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044918-exon-sc0006465-1491911889:1465..1641TCONS_00044918-exon-sc0006465-1491911889:1465..1641Clytia hemisphaericaexon
TCONS_00044918-exon-sc0006465-1510915933:1465..1641TCONS_00044918-exon-sc0006465-1510915933:1465..1641Clytia hemisphaericaexon
TCONS_00044918-exon-sc0006465-1575043694:1465..1641TCONS_00044918-exon-sc0006465-1575043694:1465..1641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006465supercontigsc0006465:1465..1641 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044918 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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