|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044743 ID=TCONS_00044743|Name=TCONS_00044743|organism=Clytia hemisphaerica|type=transcript|length=354bp
TTTCATCTAAAAGATCATGTTTTTATATCCAAGTTTAACATGATGTTTGT
ATTCCGTTGAAGGTTTGTCAACATGCTCGTGCTTCACTTCGGCAATTCGG
CCGCCAGCACCGTCTCTAAGTATCGTGATTCAGATTACCCCTTGTTGTTG
ATCGTCATGAAATCCAAAGCTGGTCTCGAAGTATGCTCCATATTGCAAGC
GAACGCCAGTTTGGATGAAGTAATGATGAGTTTGATAAACGGTTACGAAG
TCTTCGAACAAGCCAAACTGGTGGAAATTAAATCAGAGAACGAGCGTACA
GAGCGAGACTTGATGAAATAACTTCTTCTTTAGAACGAGCGTACAGAGCG
AGAC Run BLAST on NCBI transcript from alignment at sc0006123:2..1986- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044743 ID=TCONS_00044743|Name=TCONS_00044743|organism=Clytia hemisphaerica|type=transcript|length=1985bp|location=Sequence derived from alignment at sc0006123:2..1986- (Clytia hemisphaerica)
TTTCATCTAAAAGATCATGTTTTTATATCCAAGTTTAACATGATGTTTGT
ATTCCGTTGAAGGTTTGTCAACATGCTCGTGCTTCACTTCGGCAATTCGG
CCGCCAGCACCGTCTCTAAGTATCGTGATTCAGATTACCCCTTGTTGTTG
ATCGTCATGAAATCCAAAGCTGGTCTCGAAGTATGCTCCATATTGCAAGG
TTTGTAAATCTTAAAATGATAACTGTTTATAAGGTGTTTCCTTTGGAAAT
GAAGACTTAAAAGGCTTAAAACAAATGTAGGATTGGTTTAACAAACTTTA
GTTTTATACCTGTTCACTATCATCAGGTGCCTAATAACCGACAAACGGGG
GAAGTCCTAACAAGGTCCGAAGGGTTTGGGAAAAAAATCGAAAAATTAAC
AAGCGTTTATTAGGCACCTGAGAGCACTGATTATGCTTTAACTTAATGAG
TTGCTGTTAAGTTTCGATATGATGCGAACTTTCTCTAGAAGATTCCGCCC
GGATCAATTTCAATTCTCATTTTCTTGTTTCAGCGAACGCCAGTTTGGAT
GAAGTAATGATGAGTTTGATAAACGGTTACGAAGTCTTCGAACAAGCCAA
ACTGGTGGAAATTAAATCAGAGGTACAGATCCCTTATTGGATCTACCTCC
GGGTACCCCGGTGAAGGTCCTTTAAATTAACCCATGTCCGTTCGTTCGTC
CGTTCGTCTGTTGCCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTG
ATTTTTTGCACAAAGATGCAAAATGGCAATGGCCGAAATGTGACGGAGCC
CGATTTTCGAGAAAAAAAAATTTCGGCCGAAAATGCCGGAAATATGCCGT
AAAAACTTTTTTTTTTGGCATTTTCTCGAGATTTAATCATTAGTTTTTTT
GGATTTTTAGCTCAAAGATGCGTATTAACAATGCTCAAAACATGGCCGAG
TCCGATTTTTGAGAAAAAATTTTTTCCGGCGGAAAATGCCGAAAACATGC
CGGAAATCGCCGTTTTTCTAGATTTTCATAGGACTTTTTCCTTATAATTG
GTTGTCTTTTTCATTCAAAAACATTATTAATAGCAATGCTTTTTCGAATT
TTCATCCTTAGTTTTTTCTAATTTTTTGCAGAAAGATGCGTATTCGCAAT
GCTCAAAATATGGCCCAGTTCGATTTTTGAGAAATTTTTTTTCTCCGGTT
GATAATGCCGGAAATCGCCGTGTTTGCAGATTTTCTTGGATTTTTTCCTT
ATATTTCTATGTTTTTTACACAAAAACATTATTGATAACAATGCTCACCA
TCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAATGCA
CCTCGTAAATCCAGCCAGTATCTATGTAGTCTTACCCGTCACGATTTGGT
ATCCTTTTATTACCAAAGTTTTGAATTTGCAGGATAAGAATAAGAAGAAT
ATCAATGCAAAGAATTAGCTTTAAACTAGAGTATCATTANACCCTTCCCC
CCCCCCCCCCCATCAACAATCGACGATGAATTTATTGCGTTATGCATTTT
CGCTAAACGCTATGTTTTCTGTCTGATTTTTCTCATTTTTCTCCTCGCAT
TGCTATCTAACTTTCATCATCATGAGGTCCATTCAGCATCTAGCTTGTTT
ATCTGATGACTTATTCAACATTCTTATTTTCAATTCTCCCTCGGGTTCAT
AAAATCTAAATGGCACTGTCTATAATTACGAGAGCCAAGGTGCTGCAACG
TCCCATGCACCTCGTAAATCCAGCAACTATCTATGTAGTCTTACCCGTCA
CACTTCGGTATCCTTTTATTACCAAAGTTTTGAATTTGCAGGATAAGAAT
AAGAAGAATATCAATGCAAAGAATTAGCTTTAAATTAGAGTATCATTTAT
GAAATAACTTCTTCTTTAGAACGAGCGTACAGAGCGAGACTTGATGAAAT
AACTTCTTCTTTAGAACGAGCGTACAGAGCGAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044743-exon-sc0006123-1575043694:1788..1986 | TCONS_00044743-exon-sc0006123-1575043694:1788..1986 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1575043694:1365..1453 | TCONS_00044743-exon-sc0006123-1575043694:1365..1453 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1575043694:2..67 | TCONS_00044743-exon-sc0006123-1575043694:2..67 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1510915933:1788..1986 | TCONS_00044743-exon-sc0006123-1510915933:1788..1986 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1510915933:1365..1453 | TCONS_00044743-exon-sc0006123-1510915933:1365..1453 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1510915933:2..67 | TCONS_00044743-exon-sc0006123-1510915933:2..67 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1491911889:1788..1986 | TCONS_00044743-exon-sc0006123-1491911889:1788..1986 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1491911889:1365..1453 | TCONS_00044743-exon-sc0006123-1491911889:1365..1453 | Clytia hemisphaerica | exon |
| TCONS_00044743-exon-sc0006123-1491911889:2..67 | TCONS_00044743-exon-sc0006123-1491911889:2..67 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006123 | supercontig | sc0006123:2..1986 - |
Blast
The following BLAST results are available for this feature:
|
