TCONS_00044735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044735
Unique NameTCONS_00044735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length402

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044735 ID=TCONS_00044735|Name=TCONS_00044735|organism=Clytia hemisphaerica|type=transcript|length=402bp
caaagatggcggacgcACGCACGCgaattcaaaatggcgtccgatttctt
tgaaatgcttttgaataacaaaatcaaaatctaacaaaactacaacaaaa
caacaaacaacatcTTTACAACACTTATAAACGCTTATCAACTACAATCA
TGGGTGGAAGCAAGAGatcaaccaaaaagaaaaaacaaatgaaaagcaac
aacaacaacaataatgaTAGTCAACAGCTGAATGCATCTATCCTTATGTC
TATGTCAACACCATCCCAAGAATTCTTACCAACTCATCTAAAATCACCAC
CACTGGCTCTATCCCCTGCTGTCGTGGATTTAAACAAAAAGTTCGAATCG
ATCCTCAACACTGAAGGCTTAGATGGTCTACCTGACGTATTCACTACACC
TG
Run BLAST on NCBI

transcript from alignment at sc0006112:13..414

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044735 ID=TCONS_00044735|Name=TCONS_00044735|organism=Clytia hemisphaerica|type=transcript|length=402bp|location=Sequence derived from alignment at sc0006112:13..414 (Clytia hemisphaerica)
CAGGTGTAGTGAATACGTCAGGTAGACCATCTAAGCCTTCAGTGTTGAGG
ATCGATTCGAACTTTTTGTTTAAATCCACGACAGCAGGGGATAGAGCCAG
TGGTGGTGATTTTAGATGAGTTGGTAAGAATTCTTGGGATGGTGTTGACA
TAGACATAAGGATAGATGCATTCAGCTGTTGACTAtcattattgttgttg
ttgttgcttttcatttgttttttctttttggttgatCTCTTGCTTCCACC
CATGATTGTAGTTGATAAGCGTTTATAAGTGTTGTAAAgatgttgtttgt
tgttttgttgtagttttgttagattttgattttgttattcaaaagcattt
caaagaaatcggacgccattttgaattcGCGTGCGTgcgtccgccatctt
tg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028349XLOC_028349Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044735-exon-sc0006112-1491911889:13..414TCONS_00044735-exon-sc0006112-1491911889:13..414Clytia hemisphaericaexon
TCONS_00044735-exon-sc0006112-1510915933:13..414TCONS_00044735-exon-sc0006112-1510915933:13..414Clytia hemisphaericaexon
TCONS_00044735-exon-sc0006112-1575043694:13..414TCONS_00044735-exon-sc0006112-1575043694:13..414Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006112supercontigsc0006112:13..414 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28676	1.75036	1.45693	2.03626	1.84194	2.26633	1.27926	3.31878	3.25298	2.49435	0.931184	1.22425	1.10029	0.253925	1.31672	0.89613	0.827969	0.990082	0.78163	1.84032	1.42184	1.04029	0.632302	0.95809	0.394724	0.595038	0.756171	0.269002	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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