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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044724 ID=TCONS_00044724|Name=TCONS_00044724|organism=Clytia hemisphaerica|type=transcript|length=352bp
ttactgggagctgagaggaggtgtggcgctccacctcagcattcgatctt
ccaggtctagcgcaaatagaaaaggggatagactccctcactcccggctc
ggCCGACAGCCAACGGATGAATATATTTACTTACCTGCTGATCTTCATTT
CAGTTCAATTTTGTGACGAATTTCGTGTCGGGGAGGACCTCTTCAACGCC
ATGTTCATTTTCTCCATTGCTGTTTCCGTTTTCTCATTATTAAACGCGTT
GCTGTCAATCATCGCATGTTGTATATGCAAACCTAAAGAGCTACCACCAT
ATCAGAAGAACCCACCCCCTGGTTATTATCACTCAGATGATCACAAAAAT
AT Run BLAST on NCBI transcript from alignment at sc0006081:1..1960- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044724 ID=TCONS_00044724|Name=TCONS_00044724|organism=Clytia hemisphaerica|type=transcript|length=1960bp|location=Sequence derived from alignment at sc0006081:1..1960- (Clytia hemisphaerica)
TTACTGGGAGCTGAGAGGAGGTGTGGCGCTCCACCTCAGCATTCGATCTT
CCAGGTCTAGCGCAAATAGAAAAGGGGATAGACTCCCTCACTCCCGGCTC
GGCCGACAGCCAACGGATGAATATATTTACTTACCTGCTGATCTTCATTT
CAGTTCAATTTTGTGACGAATTTCGTGTCGGGGAGGACCTCTTCAACGCC
ATGTTCATTTTCTCCATTGCTGTTTCCGTTTTCTCATTATTAAACGCGTT
GCTGTCAATCATCGCATGTTGTATATGCAAACCTAAAGAGGTAAGGAATT
TAACTTTCCCAGCTGGTACGCAACGTTTTTTCGACTTTCATCTAACATTC
ACAACGTCCATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAG
CTGGGTTTAACTCTAGACCACAAATTTATAAAGCCTGTTTAAGGGCTAGA
TAGAGTACTGAATAGTGTGCTGTGCAAAGCTTTAAAGCACTCCATCTAGC
TCTTTGGGCTTCACAGAAATCTGTGCTCTAGACAGGAGCTCAAAATTAGA
GCTAGGGTTACATTTTCGGACAGAATTTCAATTTTCGGATAAATTAGAAA
TTAGAAAATAACCTTTTAAAGATGTCATCATACAATGGGCTGACCAAAAG
AGGTAATAAATGACTGTTATTACAATGAACTAAACATTCATACGAAAATG
ACTGCTATCAGAATGAACTAAGCATTCATACGCGGTGTTTAATCATTGGG
CAAAGCCAATATTTTTGAAAAATTCGGGAAAAAATTCATGATTTTTTCAA
CATTTTCTGAAATATAAAATAAAATAAGGATTCCTGAGATTCGAGAGTAG
CTTCAATCAATATCAATCAGTCTCTAATATAGAAAAGTTTTATTAATCTT
CGTTAAGGCCGGTTTACACTTGCGCGCTGTGATATGTCATTAGTCAAAAG
AAAAATGAACCAATTCCATTGGCGCGATCTGACGTAACGGATGAAAAAAG
TTGAAATGTATTCAACTTTTATCTTCGAGTGCGCTTCATTTTTATAACGC
AATCATTTTTCCAAGCAAAAAGGATTGAAGCCAAAAGATGCAATCTCACC
GTGCGCAAGTGAAGACCGGCCTTTAGAGCAGATTCGAATGTATTGAATGT
GACTGACTTACCACAAGAAAATTGCAAAGTAAAGAACTGCTGCCCTCCAA
ATTCGATTCACACGACGTTACTTTCATAAGTGAGGGTGACTTTCATCATC
CCCAATAAACAGACTGTCTGTAATTTTCATATTAAACTAGAAAAAAAGCA
AGCTACGCTTGTCTGATAGACTAAATAAATTGAGTACCAGAAAATGTTGT
GGTCTTGAGGTGATGAAAGTTATTCCAACCTTTATGAACGTAATCCTAAT
GGACGGTCTATTATTTATTATTCTTTTGAATTTTGATCTAAAAACAAAAA
GAAAACATTGTTGGACAGTTTAGAAACTATACACGAGATACCCGAGGGGG
CGAGGTACTAGGGTTGACGGGTGAGGGGTATATATGGACGGAACCTTCGA
AAACCCACCCTTAGAGAGACAAAGTTTCTAAATAAAAGTAACCCTTAGAG
AGACATTTTTATAAAAATTTCTTCGATATTCAAAAGAATTCTCCAATGCT
TTCGAAAAAATATTCTTACTCTCTTGACTTTTCACTCTTCTTTGACTCGA
GTTTGTGAAAAAACGACCCTTAGAGAGACTTTGGAACGTGAAAAAACCGC
TCCTTACCGTCTGCACATACCCAGCACTAAGTATCCCCCCCCGACAAGAT
TCCAATTTCGAGTTTTTGAGCAAAGACTCTCACAATGAGAGTGACGCCCC
TCATACAACTTAACATCATCAGATTCCAATTTCGAGTTTTTATTTCAGCT
ACCACCATATCAGAAGAACCCACCCCCTGGTTATTATCACTCAGATGATC
ACAAAAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044724-exon-sc0006081-1575043694:1671..1960 | TCONS_00044724-exon-sc0006081-1575043694:1671..1960 | Clytia hemisphaerica | exon |
| TCONS_00044724-exon-sc0006081-1575043694:1..62 | TCONS_00044724-exon-sc0006081-1575043694:1..62 | Clytia hemisphaerica | exon |
| TCONS_00044724-exon-sc0006081-1510915933:1671..1960 | TCONS_00044724-exon-sc0006081-1510915933:1671..1960 | Clytia hemisphaerica | exon |
| TCONS_00044724-exon-sc0006081-1510915933:1..62 | TCONS_00044724-exon-sc0006081-1510915933:1..62 | Clytia hemisphaerica | exon |
| TCONS_00044724-exon-sc0006081-1491911889:1671..1960 | TCONS_00044724-exon-sc0006081-1491911889:1671..1960 | Clytia hemisphaerica | exon |
| TCONS_00044724-exon-sc0006081-1491911889:1..62 | TCONS_00044724-exon-sc0006081-1491911889:1..62 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006081 | supercontig | sc0006081:1..1960 - |
Blast
The following BLAST results are available for this feature:
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