TCONS_00044719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044719
Unique NameTCONS_00044719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044719 ID=TCONS_00044719|Name=TCONS_00044719|organism=Clytia hemisphaerica|type=transcript|length=233bp
TTCACATCCGTCCTGCGCGTGGTGGAGATCCAAAACGAATTTCTGAACAG
CAACCTTGTAGCATCGTACAGTCCTGAAATTGCGTCCACAGTACTGTGGT
TTTTGAAACGTTGGACGCGAGGTTACCTACCTGGTTATTCAGCGCAATTG
AAAAACGCGCCCGTGTTAAGCGCTTGTTTTGACGTCACCAAAGAGTGCGG
TAGCCTTATGTTGAAAGTTATCCTTGAGACAGC
Run BLAST on NCBI

transcript from alignment at sc0006067:2194..2426

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044719 ID=TCONS_00044719|Name=TCONS_00044719|organism=Clytia hemisphaerica|type=transcript|length=233bp|location=Sequence derived from alignment at sc0006067:2194..2426 (Clytia hemisphaerica)
GCTGTCTCAAGGATAACTTTCAACATAAGGCTACCGCACTCTTTGGTGAC
GTCAAAACAAGCGCTTAACACGGGCGCGTTTTTCAATTGCGCTGAATAAC
CAGGTAGGTAACCTCGCGTCCAACGTTTCAAAAACCACAGTACTGTGGAC
GCAATTTCAGGACTGTACGATGCTACAAGGTTGCTGTTCAGAAATTCGTT
TTGGATCTCCACCACGCGCAGGACGGATGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028334XLOC_028334Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044719-exon-sc0006067-1491911889:2194..2426TCONS_00044719-exon-sc0006067-1491911889:2194..2426Clytia hemisphaericaexon
TCONS_00044719-exon-sc0006067-1510915933:2194..2426TCONS_00044719-exon-sc0006067-1510915933:2194..2426Clytia hemisphaericaexon
TCONS_00044719-exon-sc0006067-1575043694:2194..2426TCONS_00044719-exon-sc0006067-1575043694:2194..2426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006067supercontigsc0006067:2194..2426 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.04002	8.83496	3.41941	3.34536	69.2351	54.7105	24.5904	46.0425	7.63471	17.3163	12.2387	2.68175	6.02554	9.73402	5.7162	16.5628	12.847	19.3643	5.35056	3.35939	5.83983	4.2727	17.3134	10.4936	24.8588	16.3983	1.38034	4.41942	7.82128	12.5222
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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