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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044702 ID=TCONS_00044702|Name=TCONS_00044702|organism=Clytia hemisphaerica|type=transcript|length=939bp
acgtcagcacaatTCAGCAAAAACAATCACCCTGCACAATGCTGACGTCA
GTTAATTCGAAAGAAAAACCTCTTCAAAACTTTCCTTCTGATGGCTTGCA
GTTTTAATCCAAATTTCATTTGCCCAAACTTGGGAAGATAGCTGCTAACT
GTGATTATCATTTTATAAAAGCCTTTCATTTATATGCAACTTGATTTGTG
CGACTTGATGAGGTAAGAAAAGTAGACCAGAAAAcagttttttccaagtt
ttggtAAAAAGTTGAAGTACGTACTCAATCAAAATAATTAGTTAGGCGGT
CATTTCCAAGGCAACACACCATTGTCTAGGCATTAATACACATCTGAACA
ACTATCTTTGCCAGTTTATCCGATAAAAGCAGCGGAAGGATCCCGAATAA
GTGCCAGGAATGTTCTGTTGTTGTAAGGCACCAGGTTATCATGTCGTTAA
TTTATTACGTAATATTTTTGTCACTAATTATGGGGAGCTTTAGGCGAACG
TGCCAGTCTGTAGTAACTAGTTATATTCAATAGGGCCGTTAGTAAAAAAT
Agtttggttcccgtcaccccaactttgaaaaagtgggtcggtcggggtta
aaaaaatttatgctcAAAAATATCACGCGACAGTATCTTCATCCGCCAGG
TTGTTTTAAAAGCCCTTCTCTAAAAATTAAGCCCCAGGTTCTTATAGCCA
GAGTGGTTCCATTtggtccaaaaaatgaaaatcgggaaaaaatcCATACA
AAGCTGGATTTCGGATTAAATTTGGATGGAAATCCGCTCAAACGCCGCTT
GCTACATCGCTCAGAGTTTGTAATGGCGGAGGTTGATGATGACATTCGAG
CAGCGCCAAAACCGCTTCCTGTCCCTTCGACTCCttttactaaaaaaaaa
atagggtcggtcgggtgtgATGGGAACCAAGCTATTTTT Run BLAST on NCBI transcript from alignment at sc0006038:1181..2119 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044702 ID=TCONS_00044702|Name=TCONS_00044702|organism=Clytia hemisphaerica|type=transcript|length=939bp|location=Sequence derived from alignment at sc0006038:1181..2119 (Clytia hemisphaerica)
AAAAATAGCTTGGTTCCCATcacacccgaccgaccctattttttttttag
taaaaGGAGTCGAAGGGACAGGAAGCGGTTTTGGCGCTGCTCGAATGTCA
TCATCAACCTCCGCCATTACAAACTCTGAGCGATGTAGCAAGCGGCGTTT
GAGCGGATTTCCATCCAAATTTAATCCGAAATCCAGCTTTGTATGgattt
tttcccgattttcattttttggaccaAATGGAACCACTCTGGCTATAAGA
ACCTGGGGCTTAATTTTTAGAGAAGGGCTTTTAAAACAACCTGGCGGATG
AAGATACTGTCGCGTGATATTTTTgagcataaatttttttaaccccgacc
gacccactttttcaaagttggggtgacgggaaccaaacTATTTTTTACTA
ACGGCCCTATTGAATATAACTAGTTACTACAGACTGGCACGTTCGCCTAA
AGCTCCCCATAATTAGTGACAAAAATATTACGTAATAAATTAACGACATG
ATAACCTGGTGCCTTACAACAACAGAACATTCCTGGCACTTATTCGGGAT
CCTTCCGCTGCTTTTATCGGATAAACTGGCAAAGATAGTTGTTCAGATGT
GTATTAATGCCTAGACAATGGTGTGTTGCCTTGGAAATGACCGCCTAACT
AATTATTTTGATTGAGTACGTACTTCAACTTTTTaccaaaacttggaaaa
aactgTTTTCTGGTCTACTTTTCTTACCTCATCAAGTCGCACAAATCAAG
TTGCATATAAATGAAAGGCTTTTATAAAATGATAATCACAGTTAGCAGCT
ATCTTCCCAAGTTTGGGCAAATGAAATTTGGATTAAAACTGCAAGCCATC
AGAAGGAAAGTTTTGAAGAGGTTTTTCTTTCGAATTAACTGACGTCAGCA
TTGTGCAGGGTGATTGTTTTTGCTGAattgtgctgacgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044702-exon-sc0006038-1491911889:1181..2119 | TCONS_00044702-exon-sc0006038-1491911889:1181..2119 | Clytia hemisphaerica | exon |
| TCONS_00044702-exon-sc0006038-1510915933:1181..2119 | TCONS_00044702-exon-sc0006038-1510915933:1181..2119 | Clytia hemisphaerica | exon |
| TCONS_00044702-exon-sc0006038-1575043694:1181..2119 | TCONS_00044702-exon-sc0006038-1575043694:1181..2119 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006038 | supercontig | sc0006038:1181..2119 . |
Blast
The following BLAST results are available for this feature:
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