TCONS_00044701 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044701
Unique NameTCONS_00044701
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044701 ID=TCONS_00044701|Name=TCONS_00044701|organism=Clytia hemisphaerica|type=transcript|length=155bp
ACAAACAAATGGACCACCACTGTCTCCTTGACAAAGCCCTGCAACATTTT
TATTCCGTGTAGCTGATGCACAGAACATACGACGTGTATACTGACCAGGT
GATCCAGGAGCTTGTCTTAACTTGTTACTGCAAgtatattgagatttttt
ttgca
Run BLAST on NCBI

transcript from alignment at sc0006036:1317..1471

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044701 ID=TCONS_00044701|Name=TCONS_00044701|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at sc0006036:1317..1471 (Clytia hemisphaerica)
tgcaaaaaaaatctcaatatacTTGCAGTAACAAGTTAAGACAAGCTCCT
GGATCACCTGGTCAGTATACACGTCGTATGTTCTGTGCATCAGCTACACG
GAATAAAAATGTTGCAGGGCTTTGTCAAGGAGACAGTGGTGGTCCATTTG
TTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028316XLOC_028316Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044701-exon-sc0006036-1491911889:1317..1471TCONS_00044701-exon-sc0006036-1491911889:1317..1471Clytia hemisphaericaexon
TCONS_00044701-exon-sc0006036-1510915933:1317..1471TCONS_00044701-exon-sc0006036-1510915933:1317..1471Clytia hemisphaericaexon
TCONS_00044701-exon-sc0006036-1575043694:1317..1471TCONS_00044701-exon-sc0006036-1575043694:1317..1471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006036supercontigsc0006036:1317..1471 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044701 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top