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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044657 ID=TCONS_00044657|Name=TCONS_00044657|organism=Clytia hemisphaerica|type=transcript|length=2389bp
TTTTTGtattcaaaatttcactttttgttaAGTCAGCTTCCTTTGCTTTC
TTTAGTTTGGATGGTaagaaacttttcatttcagTGTTTTCATCAAAAAC
ACGTTCATCGTTATCATCATTAACTGGGCCTAAATCTGGtaattcttcat
tttcactgacatcttcattttcaatgtcactttcattttcttcacCGCTC
TCAATATCATTTTTCTCATTCATTTGTACGTGCAAGTCTGGTAAGTCAAT
GAATCCATTTTCAGGCAGCTTTTGTAGCCTTTCCATATCTATATTGATTC
CACTATATAGAAAATTATTAGGTTCACCTTGTTCATCTTTTCCTGTCAGC
CATAATAATGCCTGTAAAATCTTTTCACGTCTAACGACAAGTTCTTTTGA
TGTATTATTTTTcccatttattttaaaaatcattacaGGGATGTCACTTG
GTTCTCTTGGAAGGACATCCGCAATTTTTTGTACATTGTGAGGCAAATTC
AAAACGTGACCTTTGTAAGCTCTTTGACCTCCTCTTGGCCGGGTGTACAC
TTGCATTACAGGAAAGGCTCTAGCTATTAGCATTTCTTCAACTTGTGTGA
GACCTTTTAGTGCTTCTGGCACGGGACTTGGTTTCATATTATTTTCGACA
CTGAATTTCTTTGGAGTTCCTTTGTCTCTTTTGCAACGTGTACAAATATA
ATCATCGACTGAGTTTACTTTTGGCGTAACTTTTATCGGCCAGGATTCAA
AACATGTTTGACATTGAGTTATTGAGAACTTCATGGATTTCTGAAAATCT
TTTATATTTCCATTGAGCTCTGTTTCTTTTTGTTGGgttttcgaattttt
attttgttttagcgAATTGTACCTTTCTCTTCGTTGTTTTggatcatatt
tttcttttcgcttTTGTGAATTGTAAATtggctttttcttttctttctca
taGTCAGCTTTTCGCTTATCAGGGTTATAAGATGCTTTTTGCTTTTCAGG
GTCATAAGACGCTTTCTGCTTTTCAGGGTCATAAGACGCTTTTCGTTTTT
CAGGATCATAAGACGCTTTTTGTTTTTCAGGGTCATAATATGCTTTTTCC
TTTTCAGAGTCATAAAATGCTTTTCGCTTTTCAGGGTCATAAGATGCTTT
TCGCTTTTCAGAGTCATAATATGATTTTTGCATTTCAGGGTCATAATAGG
ATTTTCGCTTTTCAGGTTCATAATATGCTTTTCGCTTAGCAGGCTCATAA
TTGGCTTttcgtttcaaattttttacctttttgtcAATACTTTGAAATAA
ATTGTCAAGTTTAATTTTCTTATTACTTTTGCTACAAAGACCTTCATAGT
TAATTATGTTTCTCTTCCGATTAGGATATTCTTTTTTGGGCTCATTTTTT
GGAATAACGTTATGAGTTTTTTcgtcctttaaataattttcttgAATAGT
CGTGGTGTCTATAACAAAATCAATCATTTCGGAAGCTTTTCTATAAAACG
CAAAGAACCATCCtccattgttttttgaaaacatttcattaatgttttga
taaaatattttgtcagGATTCAAATCATCAATGTAAAcccatttattttc
aataaatataCCACAAGCAAAATGGGCACCACAATTCCTTACAATGGCAT
GTAATTTATAGTTAGTTTCTTTCACTAAAATCTGCTCAAAAAATCTGCAA
TTGTTTATGCATAATGGAGTAGAAAATTCTATCAAGAGAAAACTTGGAAG
ATCAACAGCTTGAACCTGTGCCGGTATATTGACAGAGCAAGTATTGCAAT
TTATTACTGAGCTTGGATTAATAAGAGAAGTCAATAAACAGTTCGGCCAT
GAACTTGCATCAATCATAATCTCTGGATACATAATTTCTGAAAGGATACT
AACAATGTTACCTGTTTCTCTACGTTCTTTTTCACTACCACAAGTATTAC
AAATACCTTGAACTACAAAGCTCGCTTCAAAAATGTGTCTCTCTCCTTCT
GacaatttcttgaaaatgtCACTTCCAAAAATCTCTTGGAACTCTGCGTT
ACAATCTCTTTTCTTAAATGTATCACAATTCCCAATGATTCTTGACCATA
ACGGTTCTCTAATTTCATCCAGCAGTCGAAAAGCATTACTTTtaatgtta
ttattattttcaaatgGAATTTCCATTGACCCACTTATTTGAAGCAAAGT
AAAAAATTCACTTGATTCTTCAAACAACATCTTATCTTTAATTTCTGGAA
GAAGCAAGCGGTaacatatttcaagaaaacaatcAACAGCGCAAGAAAAG
GTACGTCCAGCAGTTATTCTGCTTGAATTTCGAAAATGCGCAACACTCAA
TGCAGTGTCTACATCAATTAAAAAGTCTTCATCTTCCAt Run BLAST on NCBI protein sequence of TCONS_00044657-protein >TCONS_00044657-protein ID=TCONS_00044657-protein|Name=TCONS_00044657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MEDEDFLIDVDTALSVAHFRNSSRITAGRTFSCAVDCFLEICYRLLLPEI
KDKMLFEESSEFFTLLQISGSMEIPFENNNNIKSNAFRLLDEIREPLWSR
IIGNCDTFKKRDCNAEFQEIFGSDIFKKLSEGERHIFEASFVVQGICNTC
GSEKERRETGNIVSILSEIMYPEIMIDASSWPNCLLTSLINPSSVINCNT
CSVNIPAQVQAVDLPSFLLIEFSTPLCINNCRFFEQILVKETNYKLHAIV
RNCGAHFACGIFIENKWVYIDDLNPDKIFYQNINEMFSKNNGGWFFAFYR
KASEMIDFVIDTTTIQENYLKDEKTHNVIPKNEPKKEYPNRKRNIINYEG
LCSKSNKKIKLDNLFQSIDKKVKNLKRKANYEPAKRKAYYEPEKRKSYYD
PEMQKSYYDSEKRKASYDPEKRKAFYDSEKEKAYYDPEKQKASYDPEKRK
ASYDPEKQKASYDPEKQKASYNPDKRKADYEKEKKKPIYNSQKRKEKYDP
KQRRERYNSLKQNKNSKTQQKETELNGNIKDFQKSMKFSITQCQTCFESW
PIKVTPKVNSVDDYICTRCKRDKGTPKKFSVENNMKPSPVPEALKGLTQV
EEMLIARAFPVMQVYTRPRGGQRAYKGHVLNLPHNVQKIADVLPREPSDI
PVMIFKINGKNNTSKELVVRREKILQALLWLTGKDEQGEPNNFLYSGINI
DMERLQKLPENGFIDLPDLHVQMNEKNDIESGEENESDIENEDVSENEEL
PDLGPVNDDNDERVFDENTEMKSFLPSKLKKAKEADLTKSEILNTK Run BLAST on NCBI transcript from alignment at sc0005951:627..3015 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044657 ID=TCONS_00044657|Name=TCONS_00044657|organism=Clytia hemisphaerica|type=transcript|length=2389bp|location=Sequence derived from alignment at sc0005951:627..3015 (Clytia hemisphaerica)
aTGGAAGATGAAGACTTTTTAATTGATGTAGACACTGCATTGAGTGTTGC
GCATTTTCGAAATTCAAGCAGAATAACTGCTGGACGTACCTTTTCTTGCG
CTGTTgattgttttcttgaaatatgttACCGCTTGCTTCTTCCAGAAATT
AAAGATAAGATGTTGTTTGAAGAATCAAGTGAATTTTTTACTTTGCTTCA
AATAAGTGGGTCAATGGAAATTCcatttgaaaataataataacattaAAA
GTAATGCTTTTCGACTGCTGGATGAAATTAGAGAACCGTTATGGTCAAGA
ATCATTGGGAATTGTGATACATTTAAGAAAAGAGATTGTAACGCAGAGTT
CCAAGAGATTTTTGGAAGTGacattttcaagaaattgtCAGAAGGAGAGA
GACACATTTTTGAAGCGAGCTTTGTAGTTCAAGGTATTTGTAATACTTGT
GGTAGTGAAAAAGAACGTAGAGAAACAGGTAACATTGTTAGTATCCTTTC
AGAAATTATGTATCCAGAGATTATGATTGATGCAAGTTCATGGCCGAACT
GTTTATTGACTTCTCTTATTAATCCAAGCTCAGTAATAAATTGCAATACT
TGCTCTGTCAATATACCGGCACAGGTTCAAGCTGTTGATCTTCCAAGTTT
TCTCTTGATAGAATTTTCTACTCCATTATGCATAAACAATTGCAGATTTT
TTGAGCAGATTTTAGTGAAAGAAACTAACTATAAATTACATGCCATTGTA
AGGAATTGTGGTGCCCATTTTGCTTGTGGtatatttattgaaaataaatg
ggTTTACATTGATGATTTGAATCctgacaaaatattttatcaaaacatta
atgaaatgttttcaaaaaacaatggaGGATGGTTCTTTGCGTTTTATAGA
AAAGCTTCCGAAATGATTGATTTTGTTATAGACACCACGACTATTcaaga
aaattatttaaaggacgAAAAAACTCATAACGTTATTCCAAAAAATGAGC
CCAAAAAAGAATATCCTAATCGGAAGAGAAACATAATTAACTATGAAGGT
CTTTGTAGCAAAAGTAATAAGAAAATTAAACTTGACAATTTATTTCAAAG
TATTgacaaaaaggtaaaaaatttgaaacgaaAAGCCAATTATGAGCCTG
CTAAGCGAAAAGCATATTATGAACCTGAAAAGCGAAAATCCTATTATGAC
CCTGAAATGCAAAAATCATATTATGACTCTGAAAAGCGAAAAGCATCTTA
TGACCCTGAAAAGCGAAAAGCATTTTATGACTCTGAAAAGGAAAAAGCAT
ATTATGACCCTGAAAAACAAAAAGCGTCTTATGATCCTGAAAAACGAAAA
GCGTCTTATGACCCTGAAAAGCAGAAAGCGTCTTATGACCCTGAAAAGCA
AAAAGCATCTTATAACCCTGATAAGCGAAAAGCTGACtatgagaaagaaa
agaaaaagccaATTTACAATTCACAAaagcgaaaagaaaaatatgatccA
AAACAACGAAGAGAAAGGTACAATTcgctaaaacaaaataaaaattcgaa
aacCCAACAAAAAGAAACAGAGCTCAATGGAAATATAAAAGATTTTCAGA
AATCCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCCTGG
CCGATAAAAGTTACGCCAAAAGTAAACTCAGTCGATGATTATATTTGTAC
ACGTTGCAAAAGAGACAAAGGAACTCCAAAGAAATTCAGTGTCGAAAATA
ATATGAAACCAAGTCCCGTGCCAGAAGCACTAAAAGGTCTCACACAAGTT
GAAGAAATGCTAATAGCTAGAGCCTTTCCTGTAATGCAAGTGTACACCCG
GCCAAGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTC
ACAATGTACAAAAAATTGCGGATGTCCTTCCAAGAGAACCAAGTGACATC
CCtgtaatgatttttaaaataaatgggAAAAATAATACATCAAAAGAACT
TGTCGTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAA
AAGATGAACAAGGTGAACCTAATAATTTTCTATATAGTGGAATCAATATA
GATATGGAAAGGCTACAAAAGCTGCCTGAAAATGGATTCATTGACTTACC
AGACTTGCACGTACAAATGAATGAGAAAAATGATATTGAGAGCGgtgaag
aaaatgaaagtgacattgaaaatgaagatgtcagtgaaaatgaagaatta
CCAGATTTAGGCCCAGTTAATGATGATAACGATGAACGTGTTTTTGATGA
AAACActgaaatgaaaagtttcttACCATCCAAACTAAAGAAAGCAAAGG
AAGCTGACTtaacaaaaagtgaaattttgaataCAAAAA Coding sequence (CDS) from alignment at sc0005951:627..3015 >TCONS_00044657 ID=TCONS_00044657|Name=TCONS_00044657|organism=Clytia hemisphaerica|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0005951:627..3015 (Clytia hemisphaerica)
aTGGAAGATGAAGACTTTTTAATTGATGTAGACACTGCATTGAGTGTTGC
GCATTTTCGAAATTCAAGCAGAATAACTGCTGGACGTACCTTTTCTTGCG
CTGTTgattgttttcttgaaatatgttACCGCTTGCTTCTTCCAGAAATT
AAAGATAAGATGTTGTTTGAAGAATCAAGTGAATTTTTTACTTTGCTTCA
AATAAGTGGGTCAATGGAAATTCcatttgaaaataataataacattaAAA
GTAATGCTTTTCGACTGCTGGATGAAATTAGAGAACCGTTATGGTCAAGA
ATCATTGGGAATTGTGATACATTTAAGAAAAGAGATTGTAACGCAGAGTT
CCAAGAGATTTTTGGAAGTGacattttcaagaaattgtCAGAAGGAGAGA
GACACATTTTTGAAGCGAGCTTTGTAGTTCAAGGTATTTGTAATACTTGT
GGTAGTGAAAAAGAACGTAGAGAAACAGGTAACATTGTTAGTATCCTTTC
AGAAATTATGTATCCAGAGATTATGATTGATGCAAGTTCATGGCCGAACT
GTTTATTGACTTCTCTTATTAATCCAAGCTCAGTAATAAATTGCAATACT
TGCTCTGTCAATATACCGGCACAGGTTCAAGCTGTTGATCTTCCAAGTTT
TCTCTTGATAGAATTTTCTACTCCATTATGCATAAACAATTGCAGATTTT
TTGAGCAGATTTTAGTGAAAGAAACTAACTATAAATTACATGCCATTGTA
AGGAATTGTGGTGCCCATTTTGCTTGTGGtatatttattgaaaataaatg
ggTTTACATTGATGATTTGAATCctgacaaaatattttatcaaaacatta
atgaaatgttttcaaaaaacaatggaGGATGGTTCTTTGCGTTTTATAGA
AAAGCTTCCGAAATGATTGATTTTGTTATAGACACCACGACTATTcaaga
aaattatttaaaggacgAAAAAACTCATAACGTTATTCCAAAAAATGAGC
CCAAAAAAGAATATCCTAATCGGAAGAGAAACATAATTAACTATGAAGGT
CTTTGTAGCAAAAGTAATAAGAAAATTAAACTTGACAATTTATTTCAAAG
TATTgacaaaaaggtaaaaaatttgaaacgaaAAGCCAATTATGAGCCTG
CTAAGCGAAAAGCATATTATGAACCTGAAAAGCGAAAATCCTATTATGAC
CCTGAAATGCAAAAATCATATTATGACTCTGAAAAGCGAAAAGCATCTTA
TGACCCTGAAAAGCGAAAAGCATTTTATGACTCTGAAAAGGAAAAAGCAT
ATTATGACCCTGAAAAACAAAAAGCGTCTTATGATCCTGAAAAACGAAAA
GCGTCTTATGACCCTGAAAAGCAGAAAGCGTCTTATGACCCTGAAAAGCA
AAAAGCATCTTATAACCCTGATAAGCGAAAAGCTGACtatgagaaagaaa
agaaaaagccaATTTACAATTCACAAaagcgaaaagaaaaatatgatccA
AAACAACGAAGAGAAAGGTACAATTcgctaaaacaaaataaaaattcgaa
aacCCAACAAAAAGAAACAGAGCTCAATGGAAATATAAAAGATTTTCAGA
AATCCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCCTGG
CCGATAAAAGTTACGCCAAAAGTAAACTCAGTCGATGATTATATTTGTAC
ACGTTGCAAAAGAGACAAAGGAACTCCAAAGAAATTCAGTGTCGAAAATA
ATATGAAACCAAGTCCCGTGCCAGAAGCACTAAAAGGTCTCACACAAGTT
GAAGAAATGCTAATAGCTAGAGCCTTTCCTGTAATGCAAGTGTACACCCG
GCCAAGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTC
ACAATGTACAAAAAATTGCGGATGTCCTTCCAAGAGAACCAAGTGACATC
CCtgtaatgatttttaaaataaatgggAAAAATAATACATCAAAAGAACT
TGTCGTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAA
AAGATGAACAAGGTGAACCTAATAATTTTCTATATAGTGGAATCAATATA
GATATGGAAAGGCTACAAAAGCTGCCTGAAAATGGATTCATTGACTTACC
AGACTTGCACGTACAAATGAATGAGAAAAATGATATTGAGAGCGgtgaag
aaaatgaaagtgacattgaaaatgaagatgtcagtgaaaatgaagaatta
CCAGATTTAGGCCCAGTTAATGATGATAACGATGAACGTGTTTTTGATGA
AAACActgaaatgaaaagtttcttACCATCCAAACTAAAGAAAGCAAAGG
AAGCTGACTtaacaaaaagtgaaattttgaataCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00044657-exon-sc0005951-1491911889:627..3015 | TCONS_00044657-exon-sc0005951-1491911889:627..3015 | Clytia hemisphaerica | exon |
| TCONS_00044657-exon-sc0005951-1510915933:627..3015 | TCONS_00044657-exon-sc0005951-1510915933:627..3015 | Clytia hemisphaerica | exon |
| TCONS_00044657-exon-sc0005951-1575043694:627..3015 | TCONS_00044657-exon-sc0005951-1575043694:627..3015 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005951 | supercontig | sc0005951:627..3015 . |
Blast
The following BLAST results are available for this feature:
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