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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044569 ID=TCONS_00044569|Name=TCONS_00044569|organism=Clytia hemisphaerica|type=transcript|length=1129bp
TAAAATCAGCAGATTCAGATTCgtcatttgaagaaaataaatcatgaatG
TCTGGCCAGTGAAAATCAGCCATACTCAATGTCCTCGTTGGCGTGCCCAT
TTGTGTTATTGTGGCTTTTAATTTCTCCTTGACATCGCACCAATAGGCAT
TCGTACCTGTTACATTCTTTGAGtatctttgtaattttttcataACTACG
TAGTGATCATTATCCCTAACAAGATCTTGTAAATCTTCAATGCTCAAATT
AGCTTCACCTGGGTTttgcttgataaaaaaatttccttgacTAATCAATC
TNNNNNNNNNNNNNNNNNNNNNNNNNTCATTTTTTCCTGTCAGCCATAAT
AATGCCTGTAAAATCTTTTCACGTCTAACGACAAGTTCTTTTGAGGTATT
ATTTTTcccatttattttaaaaatcattacaGGTATGTCACTTGGTTCTC
TTGGTAGGACATCTGCAATTTTTTGTACATTGTGAGGCAAATTCAAAACG
TGACCTTTGTAAGCTCTTTGACCTCCTCNGTCACTGGGTTCTCTTGGAAG
GACATCTGCAATTTTTTGTACATTGTGAGGCAAATTCAAAACGTGACCTT
TGTAAGCTCTTTGACCTCCTCTTGGCCGGGTGTACACTTGCATTACAGGA
AAGGCTCTAGCTATTAGCATTTCTTCAACTTGTGTGAGACCTTTTAGTGC
TTCTGGCACGGGACTTGGTTTCATATTATTTTCGGCACTGAATTTCTTTG
GAGTTCCTTTGTCTCTTTTGCAACGTGTACAAATGTAATCATCGACTGAG
TTTACTTTTGGCGTAACTTTTATCGGCCAGGATTCAAAACATGTTTGACA
TTGAGTTATTGAGAACTTCATGGATTTCTGAAAATCTTTTATATTTCCAT
TGAGCTCTGTTTCTTTTTGTTGGgttttcgaatttttattttgttttagc
aAATTGTACCTTTCTCTTCGTTGTTTTggatcatatttttcttttcgctt
TTGTGAATTGTAAATtggctttttcttttctttctcataatcaGCTTTTC
GCTTATCAGGGTTATAAGATGCTTTTTGCTTTTCAGGGTCATAAGACGCT
TTCTGTTTTTCAGGGTCATAAGACGCTTT Run BLAST on NCBI protein sequence of TCONS_00044569-protein >TCONS_00044569-protein ID=TCONS_00044569-protein|Name=TCONS_00044569-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
KASYDPEKQKASYDPEKQKASYNPDKRKADYEKEKKKPIYNSQKRKEKYD
PKQRRERYNLLKQNKNSKTQQKETELNGNIKDFQKSMKFSITQCQTCFES
WPIKVTPKVNSVDDYICTRCKRDKGTPKKFSAENNMKPSPVPEALKGLTQ
VEEMLIARAFPVMQVYTRPRGGQRAYKGHVLNLPHNVQKIADVLPREPSD
XGGQRAYKGHVLNLPHNVQKIADVLPREPSDIPVMIFKINGKNNTSKELV
VRREKILQALLWLTGKNXXXXXXXXXRLISQGNFFIKQNPGEANLSIEDL
QDLVRDNDHYVVMKKLQRYSKNVTGTNAYWCDVKEKLKATITQMGTPTRT
LSMADFHWPDIHDLFSSNDESESADF Run BLAST on NCBI transcript from alignment at sc0005802:2358..3486 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044569 ID=TCONS_00044569|Name=TCONS_00044569|organism=Clytia hemisphaerica|type=transcript|length=1129bp|location=Sequence derived from alignment at sc0005802:2358..3486 (Clytia hemisphaerica)
AAAGCGTCTTATGACCCTGAAAAACAGAAAGCGTCTTATGACCCTGAAAA
GCAAAAAGCATCTTATAACCCTGATAAGCGAAAAGCtgattatgagaaag
aaaagaaaaagccaATTTACAATTCACAAaagcgaaaagaaaaatatgat
ccAAAACAACGAAGAGAAAGGTACAATTtgctaaaacaaaataaaaattc
gaaaacCCAACAAAAAGAAACAGAGCTCAATGGAAATATAAAAGATTTTC
AGAAATCCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCC
TGGCCGATAAAAGTTACGCCAAAAGTAAACTCAGTCGATGATTACATTTG
TACACGTTGCAAAAGAGACAAAGGAACTCCAAAGAAATTCAGTGCCGAAA
ATAATATGAAACCAAGTCCCGTGCCAGAAGCACTAAAAGGTCTCACACAA
GTTGAAGAAATGCTAATAGCTAGAGCCTTTCCTGTAATGCAAGTGTACAC
CCGGCCAAGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGC
CTCACAATGTACAAAAAATTGCAGATGTCCTTCCAAGAGAACCCAGTGAC
NGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTCACAA
TGTACAAAAAATTGCAGATGTCCTACCAAGAGAACCAAGTGACATACCtg
taatgatttttaaaataaatgggAAAAATAATACCTCAAAAGAACTTGTC
GTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAAAAAA
TGANNNNNNNNNNNNNNNNNNNNNNNNNAGATTGATTAgtcaaggaaatt
tttttatcaagcaaAACCCAGGTGAAGCTAATTTGAGCATTGAAGATTTA
CAAGATCTTGTTAGGGATAATGATCACTACGTAGTtatgaaaaaattaca
aagataCTCAAAGAATGTAACAGGTACGAATGCCTATTGGTGCGATGTCA
AGGAGAAATTAAAAGCCACAATAACACAAATGGGCACGCCAACGAGGACA
TTGAGTATGGCTGATTTTCACTGGCCAGACattcatgatttattttcttc
aaatgacGAATCTGAATCTGCTGATTTTA Coding sequence (CDS) from alignment at sc0005802:2358..3486 >TCONS_00044569 ID=TCONS_00044569|Name=TCONS_00044569|organism=Clytia hemisphaerica|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0005802:2358..3486 (Clytia hemisphaerica)
AAAGCGTCTTATGACCCTGAAAAACAGAAAGCGTCTTATGACCCTGAAAA
GCAAAAAGCATCTTATAACCCTGATAAGCGAAAAGCtgattatgagaaag
aaaagaaaaagccaATTTACAATTCACAAaagcgaaaagaaaaatatgat
ccAAAACAACGAAGAGAAAGGTACAATTtgctaaaacaaaataaaaattc
gaaaacCCAACAAAAAGAAACAGAGCTCAATGGAAATATAAAAGATTTTC
AGAAATCCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCC
TGGCCGATAAAAGTTACGCCAAAAGTAAACTCAGTCGATGATTACATTTG
TACACGTTGCAAAAGAGACAAAGGAACTCCAAAGAAATTCAGTGCCGAAA
ATAATATGAAACCAAGTCCCGTGCCAGAAGCACTAAAAGGTCTCACACAA
GTTGAAGAAATGCTAATAGCTAGAGCCTTTCCTGTAATGCAAGTGTACAC
CCGGCCAAGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGC
CTCACAATGTACAAAAAATTGCAGATGTCCTTCCAAGAGAACCCAGTGAC
NGAGGAGGTCAAAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTCACAA
TGTACAAAAAATTGCAGATGTCCTACCAAGAGAACCAAGTGACATACCtg
taatgatttttaaaataaatgggAAAAATAATACCTCAAAAGAACTTGTC
GTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAAAAAA
TGANNNNNNNNNNNNNNNNNNNNNNNNNAGATTGATTAgtcaaggaaatt
tttttatcaagcaaAACCCAGGTGAAGCTAATTTGAGCATTGAAGATTTA
CAAGATCTTGTTAGGGATAATGATCACTACGTAGTtatgaaaaaattaca
aagataCTCAAAGAATGTAACAGGTACGAATGCCTATTGGTGCGATGTCA
AGGAGAAATTAAAAGCCACAATAACACAAATGGGCACGCCAACGAGGACA
TTGAGTATGGCTGATTTTCACTGGCCAGACattcatgatttattttcttc
aaatgacGAATCTGAATCTGCTGATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044569-exon-sc0005802-1491911889:2358..3486 | TCONS_00044569-exon-sc0005802-1491911889:2358..3486 | Clytia hemisphaerica | exon |
| TCONS_00044569-exon-sc0005802-1510915933:2358..3486 | TCONS_00044569-exon-sc0005802-1510915933:2358..3486 | Clytia hemisphaerica | exon |
| TCONS_00044569-exon-sc0005802-1575043694:2358..3486 | TCONS_00044569-exon-sc0005802-1575043694:2358..3486 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005802 | supercontig | sc0005802:2358..3486 . |
Blast
The following BLAST results are available for this feature:
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