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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044416 ID=TCONS_00044416|Name=TCONS_00044416|organism=Clytia hemisphaerica|type=transcript|length=1455bp
gggaaaacggtatttcttgaatttctcgagctgtactttatattttttaa
tgaaattttgcacactgatgtaaaatgtcaatacctaaattgtgacggag
cccgatttttgataaacatttttttccggccgaaaatgccggaaatatcc
cggaaaaaccggttttttggcattttctcgagatttcttcattagttttt
tctgattttttgcacaaagatgcgtataaACAATGCCCAAACAATGACCG
agtccaaattttgagaaaaaatcttttccggctgaaaatgccggaaatat
gccggaaatcgccgtttttgcactGAAAGTTTGGCTTTCTCTACCACCGA
CTGCGGAAAGGTTCACCAGCTTTTGGAATGTTTGTTTTCCTCGTAATCTT
TATAATACGGAAAAGTGTAgtttattttttcttgattgGCTAACCAATGG
CTCAAATTTCAATGCAATTGACAGGTCCACTCTGAAAATTTGGCTTTTCC
ATACTCCTCCATTGAGAATTCCGCGTCGTTGATTTCGACATCATCGAAGA
CTGCATCAATTTGTTCTTCCGGATCTTCAACAGCAAGCTGTTTACCCAGT
ACGCCCTGGATATGACGGGTTCAATTTCCTGGCCTCCTCATACTGATAAG
TATCATATAGGTTTTGCTAGCCTACCATTTTTCCCCTGAGATCGTAGTTT
TCGACTTCCTGGTATGTTCGGTAGAGATTCTGTAAAAATCGATCCCAAGT
ACCTCAACAAACTTCTCATATCTAATATTGTTACTGTCGCCAGCAAGTgg
ttgatattttgaaattgtttatATTTGCTGGAGATTTGCATCCGATGAGA
ATTGTTTCCAATGAATCACGTTTTATTTTTGGTCGTGTTTAGGACAGTCT
TATTAAACTGAGTGGATAGTTGGAGAATAGATAGCTGAAGATGTAGTTTT
CAAATTCCACTCAATTCGCACCGAAACAATCTGGAGAATATGCTTTTGTG
CGGTATCTTGATAAAACTCTGGGAACATGAATTTGCAATTAATCTTTGTA
GGAAGTTGTACTGAGATACTGTTTTAGAATATGGAGTTTCCTCGTAAATT
TTTGCATCAAGCATGTAGCAAGTTCTTTCTTGCCGAATTCTGTGTAGGTT
CAATTGTAGAATTCCTGACAGCTCCTTGCCCTGTTTCAAGCTGATTGATT
CGTCCTTTTTGTCGATCAAAATTAGTTCGCAAGTGTTTGTCGTTTTTCTG
TGTCCGAGgatttattttccattttactAGGCGGTCTGGCTGTTGCTATA
GCTTTAATTTCAACTCTTTGTTCTCCTCTTGGACCATTTGCATACCTCAT
CAATCTCATTAGGGTAAAACGATTCGTTACCCCTGGTCAAAATACCTGAA
AAGATCTTACAAGGCCTTTCAAGTTCTTATGTCAAGAACTTTCCAATAAT
CTTAC Run BLAST on NCBI transcript from alignment at sc0005534:2020..3474 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044416 ID=TCONS_00044416|Name=TCONS_00044416|organism=Clytia hemisphaerica|type=transcript|length=1455bp|location=Sequence derived from alignment at sc0005534:2020..3474 (Clytia hemisphaerica)
GTAAGATTATTGGAAAGTTCTTGACATAAGAACTTGAAAGGCCTTGTAAG
ATCTTTTCAGGTATTTTGACCAGGGGTAACGAATCGTTTTACCCTAATGA
GATTGATGAGGTATGCAAATGGTCCAAGAGGAGAACAAAGAGTTGAAATT
AAAGCTATAGCAACAGCCAGACCGCCTagtaaaatggaaaataaatcCTC
GGACACAGAAAAACGACAAACACTTGCGAACTAATTTTGATCGACAAAAA
GGACGAATCAATCAGCTTGAAACAGGGCAAGGAGCTGTCAGGAATTCTAC
AATTGAACCTACACAGAATTCGGCAAGAAAGAACTTGCTACATGCTTGAT
GCAAAAATTTACGAGGAAACTCCATATTCTAAAACAGTATCTCAGTACAA
CTTCCTACAAAGATTAATTGCAAATTCATGTTCCCAGAGTTTTATCAAGA
TACCGCACAAAAGCATATTCTCCAGATTGTTTCGGTGCGAATTGAGTGGA
ATTTGAAAACTACATCTTCAGCTATCTATTCTCCAACTATCCACTCAGTT
TAATAAGACTGTCCTAAACACGACCAAAAATAAAACGTGATTCATTGGAA
ACAATTCTCATCGGATGCAAATCTCCAGCAAATataaacaatttcaaaat
atcaaccACTTGCTGGCGACAGTAACAATATTAGATATGAGAAGTTTGTT
GAGGTACTTGGGATCGATTTTTACAGAATCTCTACCGAACATACCAGGAA
GTCGAAAACTACGATCTCAGGGGAAAAATGGTAGGCTAGCAAAACCTATA
TGATACTTATCAGTATGAGGAGGCCAGGAAATTGAACCCGTCATATCCAG
GGCGTACTGGGTAAACAGCTTGCTGTTGAAGATCCGGAAGAACAAATTGA
TGCAGTCTTCGATGATGTCGAAATCAACGACGCGGAATTCTCAATGGAGG
AGTATGGAAAAGCCAAATTTTCAGAGTGGACCTGTCAATTGCATTGAAAT
TTGAGCCATTGGTTAGCcaatcaagaaaaaataaacTACACTTTTCCGTA
TTATAAAGATTACGAGGAAAACAAACATTCCAAAAGCTGGTGAACCTTTC
CGCAGTCGGTGGTAGAGAAAGCCAAACTTTCagtgcaaaaacggcgattt
ccggcatatttccggcattttcagccggaaaagattttttctcaaaattt
ggactCGGTCATTGTTTGGGCATTGTttatacgcatctttgtgcaaaaaa
tcagaaaaaactaatgaagaaatctcgagaaaatgccaaaaaaccggttt
ttccgggatatttccggcattttcggccggaaaaaaatgtttatcaaaaa
tcgggctccgtcacaatttaggtattgacattttacatcagtgtgcaaaa
tttcattaaaaaatataaagtacagctcgagaaattcaagaaataccgtt
ttccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044416-exon-sc0005534-1491911889:2020..3474 | TCONS_00044416-exon-sc0005534-1491911889:2020..3474 | Clytia hemisphaerica | exon |
| TCONS_00044416-exon-sc0005534-1510915933:2020..3474 | TCONS_00044416-exon-sc0005534-1510915933:2020..3474 | Clytia hemisphaerica | exon |
| TCONS_00044416-exon-sc0005534-1575043694:2020..3474 | TCONS_00044416-exon-sc0005534-1575043694:2020..3474 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005534 | supercontig | sc0005534:2020..3474 . |
Blast
The following BLAST results are available for this feature:
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