TCONS_00044332 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044332
Unique NameTCONS_00044332
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length334

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044332 ID=TCONS_00044332|Name=TCONS_00044332|organism=Clytia hemisphaerica|type=transcript|length=334bp
aaacaaatgaactacgcagctctgctcatAGCTCTacgctaccatttttg
ttttgatttaattttgtattttaaNCATTGCTCCTTTAACTCCAATGGCT
GGTCCATCAAATTCAATCGTCAACATTGCTCCTTTAACTCCAATGGCTGG
TCCATCAAATTCAATCGTCAACATTGCTCCTGTAACTCCAATGGCTGGTC
CATCAAATTCAATCGTCAACATTGCTCCTTTAACTCCAATGGCTGATCCA
TCAAATTATAACGTTACTCCCTGGAATGCGATGGCTGGTCCATCAAATTC
AAACATAACTCCCTCCACTCCAATGGCTGGTCCA
Run BLAST on NCBI

transcript from alignment at sc0005389:21..354

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044332 ID=TCONS_00044332|Name=TCONS_00044332|organism=Clytia hemisphaerica|type=transcript|length=334bp|location=Sequence derived from alignment at sc0005389:21..354 (Clytia hemisphaerica)
TGGACCAGCCATTGGAGTGGAGGGAGTTATGTTTGAATTTGATGGACCAG
CCATCGCATTCCAGGGAGTAACGTTATAATTTGATGGATCAGCCATTGGA
GTTAAAGGAGCAATGTTGACGATTGAATTTGATGGACCAGCCATTGGAGT
TACAGGAGCAATGTTGACGATTGAATTTGATGGACCAGCCATTGGAGTTA
AAGGAGCAATGTTGACGATTGAATTTGATGGACCAGCCATTGGAGTTAAA
GGAGCAATGNttaaaatacaaaattaaatcaaaacaaaaatggtagcgtA
GAGCTatgagcagagctgcgtagttcatttgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027965XLOC_027965Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044332-exon-sc0005389-1491911889:21..354TCONS_00044332-exon-sc0005389-1491911889:21..354Clytia hemisphaericaexon
TCONS_00044332-exon-sc0005389-1510915933:21..354TCONS_00044332-exon-sc0005389-1510915933:21..354Clytia hemisphaericaexon
TCONS_00044332-exon-sc0005389-1575043694:21..354TCONS_00044332-exon-sc0005389-1575043694:21..354Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005389supercontigsc0005389:21..354 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.283817	0	0.642704	0	1.14823	0.604897	0.364892	0.683214	0.478334	0.296247	0.575089	1.89021	1.13255	1.37219	2.09509	2.0754	1.27836	2.40218	2.41363	2.20998	2.19528	3.89912	0	0	0.304722	0.543914	3.50252	4.15332	1.57507	0.32095
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044332 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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