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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044296 ID=TCONS_00044296|Name=TCONS_00044296|organism=Clytia hemisphaerica|type=transcript|length=988bp
ACTTCAAATTGTGCCAGCTAGCCTGTCTGCACACAGCCTGTTCTCTGTTC
AAAGCCACAAAATTCTTTGGAGTATGTCTGTGTATAATTAACAAGGGAAG
CGATGCCAGTTTCAATCTTTAAATTAGATAGTGCTTGGTTATGTTCACGT
TGATAACTGTATATGGGATTTGTCAAATAAAGAGATTATGAAAAAGAGGT
tggaaacaaaaatgaaaataaaggtgtGTAAATGAAAGCGAACAACTGCG
TTAATATAAACTAAACTTTGTTAAGGGATTTGTAAATCGTGGaactattt
ttcataaaaagtgctATTTCTGGCCTTTATCGTTTATCGTTTTGGTTAAA
AAACTTTTGGCTTGTTTTCTGTTTCACTTATTCAATCAGATAATTAGATA
TAGCTCAAAGTTTCTCATTAGTTGACAAAGCGTTTAGTCAACTATTGGTC
GACTACTCTAAGGTCTCAAATGAACGTCCCACTTAATAATTAAAGGTAGG
GGAATTACTCTGAATGGCTCTAAAtttggagagaaaaaaattcggTTTCG
GacctcccccgtttatttatttttgaaaatatttccagcTATTACAAGAt
gaattgctctaaatagcctggtttATTTAATATACCCCTCTTATTTGGAC
TCCTACCCTTACTTTTCGGGACCTCAGATTAAGTAAATGACATTTTAGTG
AATACGACATTCCAttcttctttatttctcacCTTTACTTTTTGTCATTT
GCACATATTCCACTCGTAATCATCCTTTTAACGAACACCTTACCGCacaa
tttaatttgaaattttagtcGCTTCCTCTGGCACTTATATCATTGTACAT
TGAGAGAGAGAGACTTAAATAGAATGCTGGCGGTGCAGGCTTTGGTGCTG
CTAATCATTTGGTTCTTGATCATGTTTTGTTTATAATACGGTTTTAATTT
ATAACATAGTTAAAGTTATAGGAATGATTTAAGAAANN Run BLAST on NCBI transcript from alignment at sc0005317:3648..4635 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044296 ID=TCONS_00044296|Name=TCONS_00044296|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at sc0005317:3648..4635 (Clytia hemisphaerica)
NNTTTCTTAAATCATTCCTATAACTTTAACTATGTTATAAATTAAAACCG
TATTATAAACAAAACATGATCAAGAACCAAATGATTAGCAGCACCAAAGC
CTGCACCGCCAGCATTCTATTTAAGTCTCTCTCTCTCAATGTACAATGAT
ATAAGTGCCAGAGGAAGCgactaaaatttcaaattaaattgtGCGGTAAG
GTGTTCGTTAAAAGGATGATTACGAGTGGAATATGTGCAAATGACAAAAA
GTAAAGgtgagaaataaagaagaaTGGAATGTCGTATTCACTAAAATGTC
ATTTACTTAATCTGAGGTCCCGAAAAGTAAGGGTAGGAGTCCAAATAAGA
GGGGTATATTAAATaaaccaggctatttagagcaattcaTCTTGTAATAg
ctggaaatattttcaaaaataaataaacgggggaggtCCGAAAccgaatt
tttttctctccaaaTTTAGAGCCATTCAGAGTAATTCCCCTACCTTTAAT
TATTAAGTGGGACGTTCATTTGAGACCTTAGAGTAGTCGACCAATAGTTG
ACTAAACGCTTTGTCAACTAATGAGAAACTTTGAGCTATATCTAATTATC
TGATTGAATAAGTGAAACAGAAAACAAGCCAAAAGTTTTTTAACCAAAAC
GATAAACGATAAAGGCCAGAAATagcactttttatgaaaaatagttCCAC
GATTTACAAATCCCTTAACAAAGTTTAGTTTATATTAACGCAGTTGTTCG
CTTTCATTTACacacctttattttcatttttgtttccaACCTCTTTTTCA
TAATCTCTTTATTTGACAAATCCCATATACAGTTATCAACGTGAACATAA
CCAAGCACTATCTAATTTAAAGATTGAAACTGGCATCGCTTCCCTTGTTA
ATTATACACAGACATACTCCAAAGAATTTTGTGGCTTTGAACAGAGAACA
GGCTGTGTGCAGACAGGCTAGCTGGCACAATTTGAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044296-exon-sc0005317-1491911889:3648..4635 | TCONS_00044296-exon-sc0005317-1491911889:3648..4635 | Clytia hemisphaerica | exon |
| TCONS_00044296-exon-sc0005317-1510915933:3648..4635 | TCONS_00044296-exon-sc0005317-1510915933:3648..4635 | Clytia hemisphaerica | exon |
| TCONS_00044296-exon-sc0005317-1575043694:3648..4635 | TCONS_00044296-exon-sc0005317-1575043694:3648..4635 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005317 | supercontig | sc0005317:3648..4635 . |
Blast
The following BLAST results are available for this feature:
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