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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044248 ID=TCONS_00044248|Name=TCONS_00044248|organism=Clytia hemisphaerica|type=transcript|length=545bp
ttcttatgaaaaaacaagCGGGTAACTTATTGTTTTTAAGCTCCCTGTAA
GAAAGCAATGGACAATAAAGGCAAAAAAGTCACGTGAACGAATAGAAAAA
ATCtaagaataataaaaaaagagagaaaataattacccaaaaaaataaaa
tccaatAAGATATAattgcaaaaaataatttaaccaaaaattaattaaaa
ttaatcttttactttttccttataatttttttgcggacctctttaaaaat
attgatacaaaaaacaacaaaattcttATGTATAGAAATAAATTAATCTC
ATGTGGTAGTGattcaaattttcacttaacTGTAAGCCATatgatatGGT
TAGGTGACCATTTCTAGGAAAGTGAGACCAGCCAATTTTTCACCATAAAC
CATAGACCTTGGACACACATACCACAATTTGTACTATATTGTGCGCaata
aacaaaatcaaataattTTCTTGAATCTGGAATCCTTGAAACTAGCTGTG
TGATTGATCCAGTCATCATATCATATCTGGAGaaatgaaagcaaa Run BLAST on NCBI transcript from alignment at sc0005249:1870..2784+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044248 ID=TCONS_00044248|Name=TCONS_00044248|organism=Clytia hemisphaerica|type=transcript|length=915bp|location=Sequence derived from alignment at sc0005249:1870..2784+ (Clytia hemisphaerica)
ttcttatgaaaaaacaagCGGGTAACTTATTGTTTTTAAGCTCCCTGTAA
GAAAGCAATGGACAATAAAGGCAAAAAAGTCACGTGAACGAATAGAAAAA
ATCtaagaataataaaaaaagagagaaaataattacccaaaaaaataaaa
tccaatAAGATATAattgcaaaaaataatttaaccaaaaattaattaaaa
ttaatcttttactttttccttataatttttttgcggacctctttaaaaat
attgatacaaaaaacaacaaaattcttATGTATAGAAATAAATTAATCTC
ATGTGGTAGTGattcaaattttcacttaacTGTAAGCCATatatcgtcgc
atcaaaataaaaaagctttaagtccatttcttggaagattgagTTATGAC
CATAACGATGCTTTCCACCccgtttttatcgattttttggctcaaatccA
ACAAAAACCAACCAAAAGTGGCCCAATTTAAAGCTAGCtcttataaaaat
aagaattttacttttcactttattttcagggtaaaaaagccttaattcAC
ATCAGTTTAGTCCAGAGTGGAAACAATTTTGAACTAATGGCTTTTctaac
acaaaaatatttcaaatgttaaTGGTTTTTCACGATTTAAGGAATGATAA
TTTAAAgtcgattttctcaaaacaacaaaaatggacttaaagctttttta
ttttgatgcgacgatatGGTTAGGTGACCATTTCTAGGAAAGTGAGACCA
GCCAATTTTTCACCATAAACCATAGACCTTGGACACACATACCACAATTT
GTACTATATTGTGCGCaataaacaaaatcaaataattTTCTTGAATCTGG
AATCCTTGAAACTAGCTGTGTGATTGATCCAGTCATCATATCATATCTGG
AGaaatgaaagcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044248-exon-sc0005249-1491911889:1870..2211 | TCONS_00044248-exon-sc0005249-1491911889:1870..2211 | Clytia hemisphaerica | exon |
| TCONS_00044248-exon-sc0005249-1510915933:1870..2211 | TCONS_00044248-exon-sc0005249-1510915933:1870..2211 | Clytia hemisphaerica | exon |
| TCONS_00044248-exon-sc0005249-1575043694:1870..2211 | TCONS_00044248-exon-sc0005249-1575043694:1870..2211 | Clytia hemisphaerica | exon |
| TCONS_00044248-exon-sc0005249-1491911889:2582..2784 | TCONS_00044248-exon-sc0005249-1491911889:2582..2784 | Clytia hemisphaerica | exon |
| TCONS_00044248-exon-sc0005249-1510915933:2582..2784 | TCONS_00044248-exon-sc0005249-1510915933:2582..2784 | Clytia hemisphaerica | exon |
| TCONS_00044248-exon-sc0005249-1575043694:2582..2784 | TCONS_00044248-exon-sc0005249-1575043694:2582..2784 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005249 | supercontig | sc0005249:1870..2784 + |
Blast
The following BLAST results are available for this feature:
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