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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044233 ID=TCONS_00044233|Name=TCONS_00044233|organism=Clytia hemisphaerica|type=transcript|length=1057bp
ttttttccgtATTAAATTCTTCTCTTTTAACAGATGAGAGTAATGTCTCA
ACAAACTTCAATGTCACCGTTGTACCAAGGCGATTGATACACAATCGACA
ACACCTTTCAAAACCTCGTGTTGCGTGGGTGTTGACTGGAATCGAGCAAT
TCATGATGTTacgaaaaatatttaactttcATGCTTGGTCATGAATGTAC
ATTAACCTGGATGTTGGGAAAGACACTGAACCATCACACTTCAATCAGAG
ACAGCACCAAAGGTTGAGTCCATTTCAGACTTAATTCTAACCTTTGATCC
ACGTGTATATAATGTGAGCTTAATTATGTTAGAGCTATTTAGTTtacaat
tttatgatttttaaaatgattttcgGGTGGGATAAAATATCATCGTTTGA
TGCAAGTCTGTTGCATGCATTTAATTATCTCGGGGGTGGTTTTATCTTGG
GTGATGGGATATTTTTGAAGGGGTTCtatttttatgatatattttaaaCC
TTTTATATATAgtattttctacattttttctAGCATAAACCTGCATAAAC
TTGGATATTTTAGCTCATATTTGATATAAATATATACATTTTTTATCGTA
TAAAACCATTTTTCGTCGAACTTTGGTTTTCATTCCATGAGATACTTCAT
CTCCAATATCACAAAGAATTGTCTAGGGATCTGAAGTCACAAAAAATGAC
TTCACGACCATTGACTttcaagcccgaaaggctagactcgagactcctgg
atgggaaatgaaatcCAAAACGCCCGCgcgttgtttttacataaacgccg
gattgaaagtaaaatccatcgctagatttaaaaaatgcattcctcaaaaa
caaaggagccTCTAGATACTATCcctcgtcatgattacggcgccttttag
gcgcgttctggatggcaAATAAggggcttcacttttttttcttgcctggg
aaaggtttatctggcacccgatgtagaaattttcttccgacacgctaaag
ctctgaaggtcgggaaaattttcaacatctggaagaaatacattacggaa
tttcgcc Run BLAST on NCBI transcript from alignment at sc0005209:560..1653+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044233 ID=TCONS_00044233|Name=TCONS_00044233|organism=Clytia hemisphaerica|type=transcript|length=1094bp|location=Sequence derived from alignment at sc0005209:560..1653+ (Clytia hemisphaerica)
ttttttccgtATTAAATTCTTCTCTTTTAACAGATGAGAGTAATGTCTCA
ACAAACTTCAATGTCACCGTTGTACCAAGGCGATTGATACACAATCGACA
ACACCTTTCAAAACCTCGTGTTGCGTGGGTGTTGACTGGAATCGAGCAAT
TCATGATGTTacgaaaaatatttaactttcATGCTTGGTCATGAATGTAC
ATTAACCTGGATGTTGGGAAAGACACTGAACCATCACACTTCAATCAGAG
ACAGCACCAAAGGTTTGAATATATTCAACCTGTTTATAATTCAATATAGG
TTGAGTCCATTTCAGACTTAATTCTAACCTTTGATCCACGTGTATATAAT
GTGAGCTTAATTATGTTAGAGCTATTTAGTTtacaattttatgattttta
aaatgattttcgGGTGGGATAAAATATCATCGTTTGATGCAAGTCTGTTG
CATGCATTTAATTATCTCGGGGGTGGTTTTATCTTGGGTGATGGGATATT
TTTGAAGGGGTTCtatttttatgatatattttaaaCCTTTTATATATAgt
attttctacattttttctAGCATAAACCTGCATAAACTTGGATATTTTAG
CTCATATTTGATATAAATATATACATTTTTTATCGTATAAAACCATTTTT
CGTCGAACTTTGGTTTTCATTCCATGAGATACTTCATCTCCAATATCACA
AAGAATTGTCTAGGGATCTGAAGTCACAAAAAATGACTTCACGACCATTG
ACTttcaagcccgaaaggctagactcgagactcctggatgggaaatgaaa
tcCAAAACGCCCGCgcgttgtttttacataaacgccggattgaaagtaaa
atccatcgctagatttaaaaaatgcattcctcaaaaacaaaggagccTCT
AGATACTATCcctcgtcatgattacggcgccttttaggcgcgttctggat
ggcaAATAAggggcttcacttttttttcttgcctgggaaaggtttatctg
gcacccgatgtagaaattttcttccgacacgctaaagctctgaaggtcgg
gaaaattttcaacatctggaagaaatacattacggaatttcgcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044233-exon-sc0005209-1491911889:560..821 | TCONS_00044233-exon-sc0005209-1491911889:560..821 | Clytia hemisphaerica | exon |
| TCONS_00044233-exon-sc0005209-1510915933:560..821 | TCONS_00044233-exon-sc0005209-1510915933:560..821 | Clytia hemisphaerica | exon |
| TCONS_00044233-exon-sc0005209-1575043694:560..821 | TCONS_00044233-exon-sc0005209-1575043694:560..821 | Clytia hemisphaerica | exon |
| TCONS_00044233-exon-sc0005209-1491911889:859..1653 | TCONS_00044233-exon-sc0005209-1491911889:859..1653 | Clytia hemisphaerica | exon |
| TCONS_00044233-exon-sc0005209-1510915933:859..1653 | TCONS_00044233-exon-sc0005209-1510915933:859..1653 | Clytia hemisphaerica | exon |
| TCONS_00044233-exon-sc0005209-1575043694:859..1653 | TCONS_00044233-exon-sc0005209-1575043694:859..1653 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005209 | supercontig | sc0005209:560..1653 + |
Blast
The following BLAST results are available for this feature:
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