|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044191 ID=TCONS_00044191|Name=TCONS_00044191|organism=Clytia hemisphaerica|type=transcript|length=365bp
ATTAAACAATTTCAacaaattaatgttttgGTTAACAATGCTGGAATAAT
GGTATCTGGAAATTGTCAAACAACAACAATGGAAGATTATGATAAACAAA
TGAATATAAACACACGtTCTGTGTTTTATTTGACCAAACTGGCAATCCCa
cacttgataaaaacaaaaggtATGAAAAAATAGAATGTATTtatcaaaat
gaattttttaatcATATATTATTTGAACTAACAATGACGATTTACTGTCA
TCGTAATTATGTTATATTATCGATTTCCAGCCTAAAATTGATTCGTgtta
aaatatatttggataTCTATTATGTACTAGGAATAACATGGCATTCTCGG
GTGATTTGGATTCAT Run BLAST on NCBI transcript from alignment at sc0005134:1..1184+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044191 ID=TCONS_00044191|Name=TCONS_00044191|organism=Clytia hemisphaerica|type=transcript|length=1184bp|location=Sequence derived from alignment at sc0005134:1..1184+ (Clytia hemisphaerica)
ATTAAACAATTTCAacaaattaatgttttggtaaGTTTTTCATATACTTT
AATCGTTACTATAAGATTCTTTCTTTTAGTTGTTTTCACAGCTTTTCAGA
GTTCTACATTCGATCATACACCAGTTATCTGGACTTAGTTTAGCTTTTCT
TTTCTGATACCTGATGTTTAGTCAGAGCACCTGAGTCAGTGCCCTGACTA
TACCACAACCATGTCACCTAGTTTCCATTTGTTTGTCTTCTTTCAGTGTG
ATAATCATAACGGCATCCATCTCTTCCGATAGTTAAAATCAATTTGTCTC
TTCTTTCAGGTTAACAATGCTGGAATAATGGTATCTGGAAATTGTCAAAC
AACAACAATGGAAGATTATGATAAACAAATGAATATAAACACACGGTACA
ACTTTAGAAACCACTTTTTAATATGCTGATTGGTGCAGTAGGTTAAGCGA
ACTCAGATGTACAGGAAGATTTGNTTTAGAAACCACTTTTTAATATGCTG
ATTGGTGCAGTAGGTTAAGCGAACTCAGATGTACAGGAAGATTTGGATTT
TAAGCTTGGAACCAAGTGAACCAAAGCTTAAAACCTGATTTTTCGATATT
AATGACCGATCATGTATGTGACTACTGAGTCTACTTGTCCATTATGGACT
GGTAGTTCAGTGACAGAGGAAATGCATGAGCAAAGGCACGATCTTGAGTT
CGAGTCTCAACAGGTCGTCCATAAGTTTTTCTTACGAAACTGGCCACTCT
GTTAACACTGAGCCAAGCAATGTTCATCCCATAACACATGGTAAAACTGA
CTGAATTAACatttgtttgattgttgttTTCAACTGATAATCATTATAAT
ACTCCAGGAAAAAggttcttacatttttttttcagcatACCTAAGTtata
tttttgaattgaaattaaaattttctctttttcagtTCTGTGTTTTATTT
GACCAAACTGGCAATCCCacacttgataaaaacaaaaggtATGAAAAAAT
AGAATGTATTtatcaaaatgaattttttaatcATATATTATTTGAACTAA
CAATGACGATTTACTGTCATCGTAATTATGTTATATTATCGATTTCCAGC
CTAAAATTGATTCGTgttaaaatatatttggataTCTATTATGTACTAGG
AATAACATGGCATTCTCGGGTGATTTGGATTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044191-exon-sc0005134-1491911889:1..30 | TCONS_00044191-exon-sc0005134-1491911889:1..30 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1510915933:1..30 | TCONS_00044191-exon-sc0005134-1510915933:1..30 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1575043694:1..30 | TCONS_00044191-exon-sc0005134-1575043694:1..30 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1491911889:310..395 | TCONS_00044191-exon-sc0005134-1491911889:310..395 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1510915933:310..395 | TCONS_00044191-exon-sc0005134-1510915933:310..395 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1575043694:310..395 | TCONS_00044191-exon-sc0005134-1575043694:310..395 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1491911889:936..1184 | TCONS_00044191-exon-sc0005134-1491911889:936..1184 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1510915933:936..1184 | TCONS_00044191-exon-sc0005134-1510915933:936..1184 | Clytia hemisphaerica | exon |
| TCONS_00044191-exon-sc0005134-1575043694:936..1184 | TCONS_00044191-exon-sc0005134-1575043694:936..1184 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005134 | supercontig | sc0005134:1..1184 + |
Blast
The following BLAST results are available for this feature:
|
